RNA–Protein interactions for RNA: ENST00000455830.2

CRAT-206, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-206ENST00000455830 NISCHQ9Y2I1 1504 aa53.09■■■■■ 6.09
CRAT-206ENST00000455830 CCDC180Q9P1Z9 1646 aa47.63■■■■■ 5.21
CRAT-206ENST00000455830 ABCC9O60706 1549 aa47.53■■■■■ 5.2
CRAT-206ENST00000455830 RB1CC1Q8TDY2 1594 aa45.28■■■■■ 4.84
CRAT-206ENST00000455830 NACADO15069 1562 aa44.99■■■■■ 4.79
CRAT-206ENST00000455830 DCAF8L2P0C7V8 631 aa44.71■■■■■ 4.75
CRAT-206ENST00000455830 DNAJC5BQ9UF47 199 aa44.51■■■■■ 4.72
CRAT-206ENST00000455830 MYO15BQ96JP2 1530 aa44.39■■■■■ 4.7
CRAT-206ENST00000455830 UNC13AQ9UPW8 1703 aa44.32■■■■■ 4.69
CRAT-206ENST00000455830 PABPN1Q86U42 306 aaKnown RBP eCLIP44.24■■■■■ 4.67
CRAT-206ENST00000455830 ZCCHC6Q5VYS8 1495 aaKnown RBP44.03■■■■■ 4.64
CRAT-206ENST00000455830 BICRAQ9NZM4 1560 aa43.99■■■■■ 4.63
CRAT-206ENST00000455830 DCAF1Q9Y4B6 1507 aa43.85■■■■■ 4.61
CRAT-206ENST00000455830 SCRIBQ14160 1630 aa43.41■■■■■ 4.54
CRAT-206ENST00000455830 SHROOM4Q9ULL8 1493 aa43.36■■■■■ 4.53
CRAT-206ENST00000455830 CC2D2AQ9P2K1 1620 aa42.97■■■■■ 4.47
CRAT-206ENST00000455830 EIF4G1Q04637 1599 aaKnown RBP42.89■■■■■ 4.46
CRAT-206ENST00000455830 CECR2Q9BXF3 1484 aa42.81■■■■■ 4.44
CRAT-206ENST00000455830 NCAPD3P42695 1498 aa41.52■■■■■ 4.24
CRAT-206ENST00000455830 ATAD2BQ9ULI0 1458 aa41.42■■■■■ 4.22
CRAT-206ENST00000455830 SMARCA4P51532 1647 aa41.42■■■■■ 4.22
CRAT-206ENST00000455830 SMARCA2P51531 1590 aa41.3■■■■■ 4.2
CRAT-206ENST00000455830 HMGXB3Q12766 1538 aa41.24■■■■■ 4.19
CRAT-206ENST00000455830 BAZ1AQ9NRL2 1556 aaPredicted RBP41.2■■■■■ 4.19
CRAT-206ENST00000455830 ERCC6Q03468 1493 aa41.02■■■■■ 4.16
CRAT-206ENST00000455830 BAZ1BQ9UIG0 1483 aaKnown RBP41.02■■■■■ 4.16
CRAT-206ENST00000455830 PEG3Q9GZU2 1588 aa41.01■■■■■ 4.16
CRAT-206ENST00000455830 CUX2O14529 1486 aa40.93■■■■■ 4.14
CRAT-206ENST00000455830 MROH2BQ7Z745 1585 aa40.92■■■■■ 4.14
CRAT-206ENST00000455830 NESP48681 1621 aa40.87■■■■■ 4.13
CRAT-206ENST00000455830 DNAJC5Q9H3Z4 198 aa40.78■■■■■ 4.12
CRAT-206ENST00000455830 LAMC3Q9Y6N6 1575 aa40.59■■■■■ 4.09
CRAT-206ENST00000455830 THOC2Q8NI27 1593 aaKnown RBP40.47■■■■■ 4.07
CRAT-206ENST00000455830 WIZO95785 1651 aa40.46■■■■■ 4.07
CRAT-206ENST00000455830 KIF21AQ7Z4S6 1674 aa40.37■■■■■ 4.05
CRAT-206ENST00000455830 PDS5BQ9NTI5 1447 aa40.32■■■■■ 4.04
CRAT-206ENST00000455830 CADPSQ9ULU8 1353 aa40.25■■■■■ 4.03
CRAT-206ENST00000455830 RSF1Q96T23 1441 aaPredicted RBP40.08■■■■■ 4.01
CRAT-206ENST00000455830 MRC2Q9UBG0 1479 aa40■■■■□ 3.99
CRAT-206ENST00000455830 TOP2AP11388 1531 aaKnown RBP39.93■■■■□ 3.98
CRAT-206ENST00000455830 WDR62O43379 1518 aa39.91■■■■□ 3.98
CRAT-206ENST00000455830 CEP164Q9UPV0 1460 aa39.85■■■■□ 3.97
CRAT-206ENST00000455830 CFTRP13569 1480 aa39.83■■■■□ 3.97
CRAT-206ENST00000455830 FANCD2Q9BXW9 1451 aa39.81■■■■□ 3.96
CRAT-206ENST00000455830 URB2Q14146 1524 aaKnown RBP39.5■■■■□ 3.91
CRAT-206ENST00000455830 PRDM2Q13029 1718 aa39.49■■■■□ 3.91
CRAT-206ENST00000455830 CCDC88BA6NC98 1476 aa39.46■■■■□ 3.91
CRAT-206ENST00000455830 TOPBP1Q92547 1522 aa39.08■■■■□ 3.85
CRAT-206ENST00000455830 IFT140Q96RY7 1462 aa39.04■■■■□ 3.84
CRAT-206ENST00000455830 TRIM41Q8WV44 630 aa39.03■■■■□ 3.84
CRAT-206ENST00000455830 OSCARQ8IYS5 282 aa39.02■■■■□ 3.84
CRAT-206ENST00000455830 ZNF608Q9ULD9 1512 aaPredicted RBP39■■■■□ 3.83
CRAT-206ENST00000455830 ABCC8Q09428 1581 aa38.95■■■■□ 3.83
CRAT-206ENST00000455830 DNMBPQ6XZF7 1577 aa38.95■■■■□ 3.83
CRAT-206ENST00000455830 EIF4G3O43432 1585 aaKnown RBP38.81■■■■□ 3.8
CRAT-206ENST00000455830 TARBP1Q13395 1621 aaKnown RBP38.74■■■■□ 3.79
CRAT-206ENST00000455830 POLA1P09884 1462 aaPredicted RBP38.69■■■■□ 3.78
CRAT-206ENST00000455830 AQRO60306 1485 aaKnown RBP eCLIP38.64■■■■□ 3.78
CRAT-206ENST00000455830 RIMBP3CA6NJZ7 1639 aa38.59■■■■□ 3.77
CRAT-206ENST00000455830 RIMBP3BA6NNM3 1639 aa38.59■■■■□ 3.77
CRAT-206ENST00000455830 RIMBP3Q9UFD9 1639 aa38.59■■■■□ 3.77
CRAT-206ENST00000455830 RAD54L2Q9Y4B4 1467 aa38.54■■■■□ 3.76
CRAT-206ENST00000455830 CHD1O14646 1710 aa38.52■■■■□ 3.76
CRAT-206ENST00000455830 SOGA1O94964 1423 aa38.48■■■■□ 3.75
CRAT-206ENST00000455830 ARHGEF11O15085 1522 aa38.46■■■■□ 3.75
CRAT-206ENST00000455830 FGD5Q6ZNL6 1462 aa38.46■■■■□ 3.75
CRAT-206ENST00000455830 CUX1P39880 1505 aa38.45■■■■□ 3.75
CRAT-206ENST00000455830 TDRD9Q8NDG6 1382 aaKnown RBP38.4■■■■□ 3.74
CRAT-206ENST00000455830 WDR97A6NE52 1622 aa38.34■■■■□ 3.73
CRAT-206ENST00000455830 SUPT5HO00267 1087 aaKnown RBP38.33■■■■□ 3.73
CRAT-206ENST00000455830 FBLN2P98095 1184 aa38.32■■■■□ 3.72
CRAT-206ENST00000455830 SNAPC4Q5SXM2 1469 aa38.27■■■■□ 3.72
CRAT-206ENST00000455830 GRIN2BQ13224 1484 aa38.15■■■■□ 3.7
CRAT-206ENST00000455830 MAGI1Q96QZ7 1491 aaPredicted RBP38.15■■■■□ 3.7
CRAT-206ENST00000455830 CYB5RLQ6IPT4 315 aa38.12■■■■□ 3.69
CRAT-206ENST00000455830 ARAP1Q96P48 1450 aa38.1■■■■□ 3.69
CRAT-206ENST00000455830 PBRM1Q86U86 1689 aa38.06■■■■□ 3.68
CRAT-206ENST00000455830 CLASP1Q7Z460 1538 aa38.06■■■■□ 3.68
CRAT-206ENST00000455830 CHMP7Q8WUX9 453 aaPredicted RBP38.05■■■■□ 3.68
CRAT-206ENST00000455830 GAPVD1Q14C86 1478 aa38.03■■■■□ 3.68
CRAT-206ENST00000455830 ABCA10Q8WWZ4 1543 aa38.02■■■■□ 3.68
CRAT-206ENST00000455830 SYNJ1O43426 1573 aa38.02■■■■□ 3.68
CRAT-206ENST00000455830 SYNJ2O15056 1496 aa38.02■■■■□ 3.68
CRAT-206ENST00000455830 ABCA5Q8WWZ7 1642 aa37.99■■■■□ 3.67
CRAT-206ENST00000455830 BIVM-ERCC5R4GMW8 1640 aa37.87■■■■□ 3.65
CRAT-206ENST00000455830 TOP2BQ02880 1626 aa37.85■■■■□ 3.65
CRAT-206ENST00000455830 WRNQ14191 1432 aaPredicted RBP eCLIP37.85■■■■□ 3.65
CRAT-206ENST00000455830 ADAMTS12P58397 1594 aa37.69■■■■□ 3.62
CRAT-206ENST00000455830 GRIN2AQ12879 1464 aa37.67■■■■□ 3.62
CRAT-206ENST00000455830 TRHP20396 242 aaPredicted RBP37.66■■■■□ 3.62
CRAT-206ENST00000455830 CEP170Q5SW79 1584 aa37.56■■■■□ 3.6
CRAT-206ENST00000455830 FHAD1B1AJZ9 1412 aa37.54■■■■□ 3.6
CRAT-206ENST00000455830 NUP160Q12769 1436 aa37.54■■■■□ 3.6
CRAT-206ENST00000455830 ERICH3Q5RHP9 1530 aa37.54■■■■□ 3.6
CRAT-206ENST00000455830 ERCC6L2Q5T890 1561 aa37.49■■■■□ 3.59
CRAT-206ENST00000455830 SHROOM2Q13796 1616 aa37.39■■■■□ 3.58
CRAT-206ENST00000455830 RUSC2Q8N2Y8 1516 aa37.16■■■■□ 3.54
CRAT-206ENST00000455830 PRG4Q92954 1404 aaPredicted RBP37.16■■■■□ 3.54
CRAT-206ENST00000455830 JPH4Q96JJ6 628 aa37.12■■■■□ 3.53
CRAT-206ENST00000455830 KIF27Q86VH2 1401 aa37.07■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms