RNA–Protein interactions for RNA: ENST00000455768.6

YIPF3-204, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-204ENST00000455768 NISCHQ9Y2I1 1504 aa50.95■■■■■ 5.75
YIPF3-204ENST00000455768 ABCC9O60706 1549 aa45.7■■■■■ 4.91
YIPF3-204ENST00000455768 CCDC180Q9P1Z9 1646 aa45.62■■■■■ 4.89
YIPF3-204ENST00000455768 RB1CC1Q8TDY2 1594 aa43.41■■■■■ 4.54
YIPF3-204ENST00000455768 NACADO15069 1562 aa43.14■■■■■ 4.5
YIPF3-204ENST00000455768 DCAF8L2P0C7V8 631 aa42.98■■■■■ 4.47
YIPF3-204ENST00000455768 DNAJC5BQ9UF47 199 aa42.93■■■■■ 4.46
YIPF3-204ENST00000455768 PABPN1Q86U42 306 aaKnown RBP eCLIP42.59■■■■■ 4.41
YIPF3-204ENST00000455768 MYO15BQ96JP2 1530 aa42.56■■■■■ 4.4
YIPF3-204ENST00000455768 UNC13AQ9UPW8 1703 aa42.49■■■■■ 4.39
YIPF3-204ENST00000455768 BICRAQ9NZM4 1560 aa42.27■■■■■ 4.36
YIPF3-204ENST00000455768 ZCCHC6Q5VYS8 1495 aaKnown RBP42.24■■■■■ 4.35
YIPF3-204ENST00000455768 DCAF1Q9Y4B6 1507 aa42.05■■■■■ 4.32
YIPF3-204ENST00000455768 SCRIBQ14160 1630 aa41.66■■■■■ 4.26
YIPF3-204ENST00000455768 SHROOM4Q9ULL8 1493 aa41.56■■■■■ 4.24
YIPF3-204ENST00000455768 CC2D2AQ9P2K1 1620 aa41.25■■■■■ 4.19
YIPF3-204ENST00000455768 EIF4G1Q04637 1599 aaKnown RBP41.17■■■■■ 4.18
YIPF3-204ENST00000455768 CECR2Q9BXF3 1484 aa41.13■■■■■ 4.17
YIPF3-204ENST00000455768 NCAPD3P42695 1498 aa39.88■■■■□ 3.97
YIPF3-204ENST00000455768 ATAD2BQ9ULI0 1458 aa39.78■■■■□ 3.96
YIPF3-204ENST00000455768 SMARCA4P51532 1647 aa39.73■■■■□ 3.95
YIPF3-204ENST00000455768 SMARCA2P51531 1590 aa39.6■■■■□ 3.93
YIPF3-204ENST00000455768 HMGXB3Q12766 1538 aa39.55■■■■□ 3.92
YIPF3-204ENST00000455768 BAZ1AQ9NRL2 1556 aaPredicted RBP39.5■■■■□ 3.91
YIPF3-204ENST00000455768 ERCC6Q03468 1493 aa39.38■■■■□ 3.9
YIPF3-204ENST00000455768 BAZ1BQ9UIG0 1483 aaKnown RBP39.36■■■■□ 3.89
YIPF3-204ENST00000455768 PEG3Q9GZU2 1588 aa39.33■■■■□ 3.89
YIPF3-204ENST00000455768 MROH2BQ7Z745 1585 aa39.31■■■■□ 3.88
YIPF3-204ENST00000455768 NESP48681 1621 aa39.3■■■■□ 3.88
YIPF3-204ENST00000455768 CUX2O14529 1486 aa39.29■■■■□ 3.88
YIPF3-204ENST00000455768 DNAJC5Q9H3Z4 198 aa39.28■■■■□ 3.88
YIPF3-204ENST00000455768 LAMC3Q9Y6N6 1575 aa38.91■■■■□ 3.82
YIPF3-204ENST00000455768 THOC2Q8NI27 1593 aaKnown RBP38.84■■■■□ 3.81
YIPF3-204ENST00000455768 WIZO95785 1651 aa38.81■■■■□ 3.8
YIPF3-204ENST00000455768 KIF21AQ7Z4S6 1674 aa38.72■■■■□ 3.79
YIPF3-204ENST00000455768 PDS5BQ9NTI5 1447 aa38.69■■■■□ 3.78
YIPF3-204ENST00000455768 CADPSQ9ULU8 1353 aa38.67■■■■□ 3.78
YIPF3-204ENST00000455768 RSF1Q96T23 1441 aaPredicted RBP38.5■■■■□ 3.75
YIPF3-204ENST00000455768 MRC2Q9UBG0 1479 aa38.4■■■■□ 3.74
YIPF3-204ENST00000455768 WDR62O43379 1518 aa38.31■■■■□ 3.72
YIPF3-204ENST00000455768 TOP2AP11388 1531 aaKnown RBP38.29■■■■□ 3.72
YIPF3-204ENST00000455768 CFTRP13569 1480 aa38.24■■■■□ 3.71
YIPF3-204ENST00000455768 FANCD2Q9BXW9 1451 aa38.23■■■■□ 3.71
YIPF3-204ENST00000455768 CEP164Q9UPV0 1460 aa38.23■■■■□ 3.71
YIPF3-204ENST00000455768 URB2Q14146 1524 aaKnown RBP37.96■■■■□ 3.67
YIPF3-204ENST00000455768 CCDC88BA6NC98 1476 aa37.9■■■■□ 3.66
YIPF3-204ENST00000455768 PRDM2Q13029 1718 aa37.76■■■■□ 3.64
YIPF3-204ENST00000455768 TRIM41Q8WV44 630 aa37.57■■■■□ 3.6
YIPF3-204ENST00000455768 TOPBP1Q92547 1522 aa37.52■■■■□ 3.6
YIPF3-204ENST00000455768 OSCARQ8IYS5 282 aa37.52■■■■□ 3.6
YIPF3-204ENST00000455768 ZNF608Q9ULD9 1512 aaPredicted RBP37.5■■■■□ 3.59
YIPF3-204ENST00000455768 IFT140Q96RY7 1462 aa37.47■■■■□ 3.59
YIPF3-204ENST00000455768 DNMBPQ6XZF7 1577 aa37.35■■■■□ 3.57
YIPF3-204ENST00000455768 ABCC8Q09428 1581 aa37.34■■■■□ 3.57
YIPF3-204ENST00000455768 EIF4G3O43432 1585 aaKnown RBP37.23■■■■□ 3.55
YIPF3-204ENST00000455768 TARBP1Q13395 1621 aaKnown RBP37.18■■■■□ 3.54
YIPF3-204ENST00000455768 AQRO60306 1485 aaKnown RBP eCLIP37.14■■■■□ 3.542e-8■■■□□ 18.4
YIPF3-204ENST00000455768 POLA1P09884 1462 aaPredicted RBP37.14■■■■□ 3.54
YIPF3-204ENST00000455768 RIMBP3CA6NJZ7 1639 aa37.05■■■■□ 3.52
YIPF3-204ENST00000455768 RIMBP3BA6NNM3 1639 aa37.05■■■■□ 3.52
YIPF3-204ENST00000455768 RIMBP3Q9UFD9 1639 aa37.05■■■■□ 3.52
YIPF3-204ENST00000455768 RAD54L2Q9Y4B4 1467 aa37.04■■■■□ 3.52
YIPF3-204ENST00000455768 ARHGEF11O15085 1522 aa36.95■■■■□ 3.51
YIPF3-204ENST00000455768 SOGA1O94964 1423 aa36.95■■■■□ 3.51
YIPF3-204ENST00000455768 CHD1O14646 1710 aa36.93■■■■□ 3.5
YIPF3-204ENST00000455768 TDRD9Q8NDG6 1382 aaKnown RBP36.92■■■■□ 3.5
YIPF3-204ENST00000455768 CUX1P39880 1505 aa36.92■■■■□ 3.5
YIPF3-204ENST00000455768 FGD5Q6ZNL6 1462 aa36.92■■■■□ 3.5
YIPF3-204ENST00000455768 FBLN2P98095 1184 aa36.84■■■■□ 3.49
YIPF3-204ENST00000455768 SUPT5HO00267 1087 aaKnown RBP36.82■■■■□ 3.48
YIPF3-204ENST00000455768 SNAPC4Q5SXM2 1469 aa36.74■■■■□ 3.47
YIPF3-204ENST00000455768 WDR97A6NE52 1622 aa36.7■■■■□ 3.47
YIPF3-204ENST00000455768 CYB5RLQ6IPT4 315 aa36.68■■■■□ 3.46
YIPF3-204ENST00000455768 ARAP1Q96P48 1450 aa36.62■■■■□ 3.45
YIPF3-204ENST00000455768 GRIN2BQ13224 1484 aa36.62■■■■□ 3.45
YIPF3-204ENST00000455768 MAGI1Q96QZ7 1491 aaPredicted RBP36.6■■■■□ 3.45
YIPF3-204ENST00000455768 CHMP7Q8WUX9 453 aaPredicted RBP36.55■■■■□ 3.44
YIPF3-204ENST00000455768 CLASP1Q7Z460 1538 aa36.54■■■■□ 3.44
YIPF3-204ENST00000455768 GAPVD1Q14C86 1478 aa36.5■■■■□ 3.43
YIPF3-204ENST00000455768 SYNJ2O15056 1496 aa36.5■■■■□ 3.43
YIPF3-204ENST00000455768 ABCA10Q8WWZ4 1543 aa36.48■■■■□ 3.43
YIPF3-204ENST00000455768 PBRM1Q86U86 1689 aa36.45■■■■□ 3.42
YIPF3-204ENST00000455768 SYNJ1O43426 1573 aa36.44■■■■□ 3.42
YIPF3-204ENST00000455768 ABCA5Q8WWZ7 1642 aa36.43■■■■□ 3.42
YIPF3-204ENST00000455768 WRNQ14191 1432 aaPredicted RBP eCLIP36.33■■■■□ 3.41
YIPF3-204ENST00000455768 TOP2BQ02880 1626 aa36.28■■■■□ 3.4
YIPF3-204ENST00000455768 BIVM-ERCC5R4GMW8 1640 aa36.27■■■■□ 3.4
YIPF3-204ENST00000455768 TRHP20396 242 aaPredicted RBP36.21■■■■□ 3.39
YIPF3-204ENST00000455768 GRIN2AQ12879 1464 aa36.17■■■■□ 3.38
YIPF3-204ENST00000455768 ADAMTS12P58397 1594 aa36.15■■■■□ 3.38
YIPF3-204ENST00000455768 NUP160Q12769 1436 aa36.06■■■■□ 3.36
YIPF3-204ENST00000455768 CEP170Q5SW79 1584 aa36.06■■■■□ 3.36
YIPF3-204ENST00000455768 ERCC6L2Q5T890 1561 aa36.04■■■■□ 3.36
YIPF3-204ENST00000455768 FHAD1B1AJZ9 1412 aa36.03■■■■□ 3.36
YIPF3-204ENST00000455768 ERICH3Q5RHP9 1530 aa35.99■■■■□ 3.35
YIPF3-204ENST00000455768 SHROOM2Q13796 1616 aa35.87■■■■□ 3.33
YIPF3-204ENST00000455768 PRG4Q92954 1404 aaPredicted RBP35.7■■■■□ 3.31
YIPF3-204ENST00000455768 JPH4Q96JJ6 628 aa35.67■■■■□ 3.3
YIPF3-204ENST00000455768 RUSC2Q8N2Y8 1516 aa35.64■■■■□ 3.3
YIPF3-204ENST00000455768 IGF1RP08069 1367 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms