RNA–Protein interactions for RNA: ENST00000455695.1

RGPD6-205, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-205ENST00000455695 NISCHQ9Y2I1 1504 aa51.58■■■■■ 5.85
RGPD6-205ENST00000455695 ABCC9O60706 1549 aa46.18■■■■■ 4.98
RGPD6-205ENST00000455695 CCDC180Q9P1Z9 1646 aa46■■■■■ 4.95
RGPD6-205ENST00000455695 DNAJC5BQ9UF47 199 aa44.04■■■■■ 4.64
RGPD6-205ENST00000455695 RB1CC1Q8TDY2 1594 aa43.7■■■■■ 4.59
RGPD6-205ENST00000455695 NACADO15069 1562 aa43.28■■■■■ 4.52
RGPD6-205ENST00000455695 DCAF8L2P0C7V8 631 aa43.22■■■■■ 4.51
RGPD6-205ENST00000455695 MYO15BQ96JP2 1530 aa42.95■■■■■ 4.47
RGPD6-205ENST00000455695 PABPN1Q86U42 306 aaKnown RBP eCLIP42.92■■■■■ 4.46
RGPD6-205ENST00000455695 ZCCHC6Q5VYS8 1495 aaKnown RBP42.91■■■■■ 4.46
RGPD6-205ENST00000455695 DCAF1Q9Y4B6 1507 aa42.7■■■■■ 4.43
RGPD6-205ENST00000455695 UNC13AQ9UPW8 1703 aa42.61■■■■■ 4.41
RGPD6-205ENST00000455695 BICRAQ9NZM4 1560 aa42.44■■■■■ 4.39
RGPD6-205ENST00000455695 SCRIBQ14160 1630 aa41.9■■■■■ 4.3
RGPD6-205ENST00000455695 SHROOM4Q9ULL8 1493 aa41.89■■■■■ 4.3
RGPD6-205ENST00000455695 CECR2Q9BXF3 1484 aa41.72■■■■■ 4.27
RGPD6-205ENST00000455695 CC2D2AQ9P2K1 1620 aa41.7■■■■■ 4.27
RGPD6-205ENST00000455695 EIF4G1Q04637 1599 aaKnown RBP41.46■■■■■ 4.23
RGPD6-205ENST00000455695 DNAJC5Q9H3Z4 198 aa41.03■■■■■ 4.16
RGPD6-205ENST00000455695 CUX2O14529 1486 aa40.19■■■■■ 4.02
RGPD6-205ENST00000455695 SMARCA4P51532 1647 aa40.08■■■■■ 4.01
RGPD6-205ENST00000455695 BAZ1AQ9NRL2 1556 aaPredicted RBP40.03■■■■■ 4
RGPD6-205ENST00000455695 NCAPD3P42695 1498 aa40■■■■□ 3.99
RGPD6-205ENST00000455695 ERCC6Q03468 1493 aa39.94■■■■□ 3.98
RGPD6-205ENST00000455695 SMARCA2P51531 1590 aa39.89■■■■□ 3.98
RGPD6-205ENST00000455695 ATAD2BQ9ULI0 1458 aa39.88■■■■□ 3.97
RGPD6-205ENST00000455695 MROH2BQ7Z745 1585 aa39.71■■■■□ 3.95
RGPD6-205ENST00000455695 HMGXB3Q12766 1538 aa39.7■■■■□ 3.95
RGPD6-205ENST00000455695 PEG3Q9GZU2 1588 aa39.68■■■■□ 3.94
RGPD6-205ENST00000455695 BAZ1BQ9UIG0 1483 aaKnown RBP39.58■■■■□ 3.93
RGPD6-205ENST00000455695 NESP48681 1621 aa39.47■■■■□ 3.91
RGPD6-205ENST00000455695 WIZO95785 1651 aa39.32■■■■□ 3.88
RGPD6-205ENST00000455695 THOC2Q8NI27 1593 aaKnown RBP39.21■■■■□ 3.87
RGPD6-205ENST00000455695 RSF1Q96T23 1441 aaPredicted RBP39.21■■■■□ 3.87
RGPD6-205ENST00000455695 LAMC3Q9Y6N6 1575 aa39.14■■■■□ 3.86
RGPD6-205ENST00000455695 PDS5BQ9NTI5 1447 aa38.97■■■■□ 3.83
RGPD6-205ENST00000455695 TOP2AP11388 1531 aaKnown RBP38.89■■■■□ 3.82
RGPD6-205ENST00000455695 KIF21AQ7Z4S6 1674 aa38.89■■■■□ 3.82
RGPD6-205ENST00000455695 TRIM41Q8WV44 630 aa38.8■■■■□ 3.8
RGPD6-205ENST00000455695 CADPSQ9ULU8 1353 aa38.73■■■■□ 3.79
RGPD6-205ENST00000455695 MRC2Q9UBG0 1479 aa38.64■■■■□ 3.78
RGPD6-205ENST00000455695 WDR62O43379 1518 aa38.56■■■■□ 3.76
RGPD6-205ENST00000455695 CFTRP13569 1480 aa38.45■■■■□ 3.75
RGPD6-205ENST00000455695 CCDC88BA6NC98 1476 aa38.42■■■■□ 3.74
RGPD6-205ENST00000455695 CEP164Q9UPV0 1460 aa38.33■■■■□ 3.73
RGPD6-205ENST00000455695 FANCD2Q9BXW9 1451 aa38.28■■■■□ 3.72
RGPD6-205ENST00000455695 OSCARQ8IYS5 282 aa38.28■■■■□ 3.72
RGPD6-205ENST00000455695 PRDM2Q13029 1718 aa38.26■■■■□ 3.71
RGPD6-205ENST00000455695 SUPT5HO00267 1087 aaKnown RBP38.13■■■■□ 3.69
RGPD6-205ENST00000455695 URB2Q14146 1524 aaKnown RBP37.95■■■■□ 3.67
RGPD6-205ENST00000455695 RIMBP3CA6NJZ7 1639 aa37.73■■■■□ 3.63
RGPD6-205ENST00000455695 RIMBP3BA6NNM3 1639 aa37.73■■■■□ 3.63
RGPD6-205ENST00000455695 RIMBP3Q9UFD9 1639 aa37.73■■■■□ 3.63
RGPD6-205ENST00000455695 ABCC8Q09428 1581 aa37.72■■■■□ 3.63
RGPD6-205ENST00000455695 TOPBP1Q92547 1522 aa37.65■■■■□ 3.62
RGPD6-205ENST00000455695 IFT140Q96RY7 1462 aa37.62■■■■□ 3.61
RGPD6-205ENST00000455695 DNMBPQ6XZF7 1577 aa37.62■■■■□ 3.61
RGPD6-205ENST00000455695 ZNF608Q9ULD9 1512 aaPredicted RBP37.58■■■■□ 3.61
RGPD6-205ENST00000455695 ARHGEF11O15085 1522 aa37.56■■■■□ 3.6
RGPD6-205ENST00000455695 CYB5RLQ6IPT4 315 aa37.37■■■■□ 3.57
RGPD6-205ENST00000455695 POLA1P09884 1462 aaPredicted RBP37.31■■■■□ 3.56
RGPD6-205ENST00000455695 EIF4G3O43432 1585 aaKnown RBP37.3■■■■□ 3.56
RGPD6-205ENST00000455695 CUX1P39880 1505 aa37.27■■■■□ 3.56
RGPD6-205ENST00000455695 TARBP1Q13395 1621 aaKnown RBP37.25■■■■□ 3.55
RGPD6-205ENST00000455695 FGD5Q6ZNL6 1462 aa37.2■■■■□ 3.55
RGPD6-205ENST00000455695 SOGA1O94964 1423 aa37.19■■■■□ 3.54
RGPD6-205ENST00000455695 AQRO60306 1485 aaKnown RBP eCLIP37.18■■■■□ 3.54
RGPD6-205ENST00000455695 TRHP20396 242 aaPredicted RBP37.16■■■■□ 3.54
RGPD6-205ENST00000455695 ARAP1Q96P48 1450 aa37.14■■■■□ 3.54
RGPD6-205ENST00000455695 CHD1O14646 1710 aa37.13■■■■□ 3.54
RGPD6-205ENST00000455695 RAD54L2Q9Y4B4 1467 aa37.13■■■■□ 3.53
RGPD6-205ENST00000455695 FBLN2P98095 1184 aa37.06■■■■□ 3.52
RGPD6-205ENST00000455695 WDR97A6NE52 1622 aa37.03■■■■□ 3.52
RGPD6-205ENST00000455695 WRNQ14191 1432 aaPredicted RBP eCLIP37.02■■■■□ 3.52
RGPD6-205ENST00000455695 TOP2BQ02880 1626 aa36.96■■■■□ 3.51
RGPD6-205ENST00000455695 BIVM-ERCC5R4GMW8 1640 aa36.96■■■■□ 3.51
RGPD6-205ENST00000455695 TDRD9Q8NDG6 1382 aaKnown RBP36.95■■■■□ 3.51
RGPD6-205ENST00000455695 SYNJ1O43426 1573 aa36.9■■■■□ 3.5
RGPD6-205ENST00000455695 ABCA10Q8WWZ4 1543 aa36.85■■■■□ 3.49
RGPD6-205ENST00000455695 GRIN2BQ13224 1484 aa36.77■■■■□ 3.48
RGPD6-205ENST00000455695 CLASP1Q7Z460 1538 aa36.77■■■■□ 3.48
RGPD6-205ENST00000455695 GAPVD1Q14C86 1478 aa36.75■■■■□ 3.47
RGPD6-205ENST00000455695 SNAPC4Q5SXM2 1469 aa36.75■■■■□ 3.47
RGPD6-205ENST00000455695 CHMP7Q8WUX9 453 aaPredicted RBP36.73■■■■□ 3.47
RGPD6-205ENST00000455695 PBRM1Q86U86 1689 aa36.72■■■■□ 3.47
RGPD6-205ENST00000455695 ABCA5Q8WWZ7 1642 aa36.7■■■■□ 3.47
RGPD6-205ENST00000455695 MAGI1Q96QZ7 1491 aaPredicted RBP36.7■■■■□ 3.47
RGPD6-205ENST00000455695 AEBP2Q6ZN18 517 aaPredicted RBP36.62■■■■□ 3.45
RGPD6-205ENST00000455695 SYNJ2O15056 1496 aa36.56■■■■□ 3.44
RGPD6-205ENST00000455695 ERICH3Q5RHP9 1530 aa36.43■■■■□ 3.42
RGPD6-205ENST00000455695 ADAMTS12P58397 1594 aa36.37■■■■□ 3.41
RGPD6-205ENST00000455695 FHAD1B1AJZ9 1412 aa36.33■■■■□ 3.41
RGPD6-205ENST00000455695 KIF27Q86VH2 1401 aa36.29■■■■□ 3.4
RGPD6-205ENST00000455695 GRIN2AQ12879 1464 aa36.29■■■■□ 3.4
RGPD6-205ENST00000455695 NUP160Q12769 1436 aa36.11■■■■□ 3.37
RGPD6-205ENST00000455695 IGF1RP08069 1367 aa36.1■■■■□ 3.37
RGPD6-205ENST00000455695 ERCC6L2Q5T890 1561 aa36.1■■■■□ 3.37
RGPD6-205ENST00000455695 CUL7Q14999 1698 aa36.1■■■■□ 3.37
RGPD6-205ENST00000455695 CEP170Q5SW79 1584 aa36.09■■■■□ 3.37
RGPD6-205ENST00000455695 SHROOM2Q13796 1616 aa35.94■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms