RNA–Protein interactions for RNA: ENST00000455691.2

VPS25P1-201, Transcript of VPS25 pseudogene 1, humanhuman

BASIC

Gene VPS25P1, Length 508 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25P1-201ENST00000455691 NISCHQ9Y2I1 1504 aa15.33■□□□□ 0.04
VPS25P1-201ENST00000455691 ABCC9O60706 1549 aa14.14□□□□□ -0.15
VPS25P1-201ENST00000455691 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
VPS25P1-201ENST00000455691 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
VPS25P1-201ENST00000455691 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
VPS25P1-201ENST00000455691 UNC13AQ9UPW8 1703 aa13.22□□□□□ -0.29
VPS25P1-201ENST00000455691 NACADO15069 1562 aa13.2□□□□□ -0.3
VPS25P1-201ENST00000455691 BICRAQ9NZM4 1560 aa13.12□□□□□ -0.31
VPS25P1-201ENST00000455691 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
VPS25P1-201ENST00000455691 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
VPS25P1-201ENST00000455691 SHROOM4Q9ULL8 1493 aa12.84□□□□□ -0.35
VPS25P1-201ENST00000455691 CC2D2AQ9P2K1 1620 aa12.84□□□□□ -0.35
VPS25P1-201ENST00000455691 CECR2Q9BXF3 1484 aa12.78□□□□□ -0.36
VPS25P1-201ENST00000455691 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
VPS25P1-201ENST00000455691 DCAF1Q9Y4B6 1507 aa12.69□□□□□ -0.38
VPS25P1-201ENST00000455691 DCAF8L2P0C7V8 631 aa12.69□□□□□ -0.38
VPS25P1-201ENST00000455691 ZCCHC6Q5VYS8 1495 aaKnown RBP12.68□□□□□ -0.38
VPS25P1-201ENST00000455691 DNAJC5Q9H3Z4 198 aa12.66□□□□□ -0.38
VPS25P1-201ENST00000455691 SCRIBQ14160 1630 aa12.61□□□□□ -0.39
VPS25P1-201ENST00000455691 CUX2O14529 1486 aa12.36□□□□□ -0.43
VPS25P1-201ENST00000455691 NCAPD3P42695 1498 aa12.2□□□□□ -0.46
VPS25P1-201ENST00000455691 THOC2Q8NI27 1593 aaKnown RBP12.16□□□□□ -0.46
VPS25P1-201ENST00000455691 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
VPS25P1-201ENST00000455691 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
VPS25P1-201ENST00000455691 NESP48681 1621 aa12.11□□□□□ -0.47
VPS25P1-201ENST00000455691 ATAD2BQ9ULI0 1458 aa12.1□□□□□ -0.47
VPS25P1-201ENST00000455691 SMARCA4P51532 1647 aa12.05□□□□□ -0.48
VPS25P1-201ENST00000455691 SMARCA2P51531 1590 aa12.02□□□□□ -0.49
VPS25P1-201ENST00000455691 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
VPS25P1-201ENST00000455691 PEG3Q9GZU2 1588 aa12□□□□□ -0.49
VPS25P1-201ENST00000455691 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.49
VPS25P1-201ENST00000455691 BAZ1BQ9UIG0 1483 aaKnown RBP11.9□□□□□ -0.5
VPS25P1-201ENST00000455691 BAZ1AQ9NRL2 1556 aaPredicted RBP11.88□□□□□ -0.51
VPS25P1-201ENST00000455691 WDR62O43379 1518 aa11.86□□□□□ -0.51
VPS25P1-201ENST00000455691 MROH2BQ7Z745 1585 aa11.82□□□□□ -0.52
VPS25P1-201ENST00000455691 TRIM41Q8WV44 630 aa11.81□□□□□ -0.52
VPS25P1-201ENST00000455691 MRC2Q9UBG0 1479 aa11.8□□□□□ -0.52
VPS25P1-201ENST00000455691 PDS5BQ9NTI5 1447 aa11.79□□□□□ -0.52
VPS25P1-201ENST00000455691 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
VPS25P1-201ENST00000455691 RIMBP3CA6NJZ7 1639 aa11.67□□□□□ -0.54
VPS25P1-201ENST00000455691 RIMBP3BA6NNM3 1639 aa11.67□□□□□ -0.54
VPS25P1-201ENST00000455691 RIMBP3Q9UFD9 1639 aa11.67□□□□□ -0.54
VPS25P1-201ENST00000455691 WIZO95785 1651 aa11.65□□□□□ -0.54
VPS25P1-201ENST00000455691 CEP164Q9UPV0 1460 aa11.65□□□□□ -0.54
VPS25P1-201ENST00000455691 URB2Q14146 1524 aaKnown RBP11.63□□□□□ -0.55
VPS25P1-201ENST00000455691 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
VPS25P1-201ENST00000455691 CFTRP13569 1480 aa11.61□□□□□ -0.55
VPS25P1-201ENST00000455691 ARHGEF11O15085 1522 aa11.57□□□□□ -0.56
VPS25P1-201ENST00000455691 OSCARQ8IYS5 282 aa11.56□□□□□ -0.56
VPS25P1-201ENST00000455691 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
VPS25P1-201ENST00000455691 ZNF608Q9ULD9 1512 aaPredicted RBP11.52□□□□□ -0.57
VPS25P1-201ENST00000455691 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
VPS25P1-201ENST00000455691 EIF4G3O43432 1585 aaKnown RBP11.47□□□□□ -0.57
VPS25P1-201ENST00000455691 ARAP1Q96P48 1450 aa11.46□□□□□ -0.57
VPS25P1-201ENST00000455691 CHD1O14646 1710 aa11.46□□□□□ -0.58
VPS25P1-201ENST00000455691 IFT140Q96RY7 1462 aa11.44□□□□□ -0.58
VPS25P1-201ENST00000455691 RSF1Q96T23 1441 aaPredicted RBP11.42□□□□□ -0.58
VPS25P1-201ENST00000455691 TOPBP1Q92547 1522 aa11.41□□□□□ -0.58
VPS25P1-201ENST00000455691 TARBP1Q13395 1621 aaKnown RBP11.41□□□□□ -0.58
VPS25P1-201ENST00000455691 DNMBPQ6XZF7 1577 aa11.35□□□□□ -0.59
VPS25P1-201ENST00000455691 CLASP1Q7Z460 1538 aa11.34□□□□□ -0.59
VPS25P1-201ENST00000455691 CCDC88BA6NC98 1476 aa11.31□□□□□ -0.6
VPS25P1-201ENST00000455691 CYB5RLQ6IPT4 315 aa11.3□□□□□ -0.6
VPS25P1-201ENST00000455691 AQRO60306 1485 aaKnown RBP eCLIP11.3□□□□□ -0.6
VPS25P1-201ENST00000455691 POLA1P09884 1462 aaPredicted RBP11.28□□□□□ -0.6
VPS25P1-201ENST00000455691 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
VPS25P1-201ENST00000455691 WDR97A6NE52 1622 aa11.23□□□□□ -0.61
VPS25P1-201ENST00000455691 SNAPC4Q5SXM2 1469 aa11.2□□□□□ -0.62
VPS25P1-201ENST00000455691 RAD54L2Q9Y4B4 1467 aa11.2□□□□□ -0.62
VPS25P1-201ENST00000455691 SUPT5HO00267 1087 aaKnown RBP11.19□□□□□ -0.62
VPS25P1-201ENST00000455691 TRHP20396 242 aaPredicted RBP11.19□□□□□ -0.62
VPS25P1-201ENST00000455691 SYNJ1O43426 1573 aa11.18□□□□□ -0.62
VPS25P1-201ENST00000455691 MAGI1Q96QZ7 1491 aaPredicted RBP11.16□□□□□ -0.62
VPS25P1-201ENST00000455691 TDRD9Q8NDG6 1382 aaKnown RBP11.14□□□□□ -0.63
VPS25P1-201ENST00000455691 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
VPS25P1-201ENST00000455691 FGD5Q6ZNL6 1462 aa11.13□□□□□ -0.63
VPS25P1-201ENST00000455691 ERCC6L2Q5T890 1561 aa11.13□□□□□ -0.63
VPS25P1-201ENST00000455691 CUX1P39880 1505 aa11.13□□□□□ -0.63
VPS25P1-201ENST00000455691 SYNJ2O15056 1496 aa11.12□□□□□ -0.63
VPS25P1-201ENST00000455691 GAPVD1Q14C86 1478 aa11.12□□□□□ -0.63
VPS25P1-201ENST00000455691 KIF13AQ9H1H9 1805 aa11.11□□□□□ -0.63
VPS25P1-201ENST00000455691 SOGA1O94964 1423 aa11.1□□□□□ -0.63
VPS25P1-201ENST00000455691 ABCA5Q8WWZ7 1642 aa11.1□□□□□ -0.63
VPS25P1-201ENST00000455691 GRIN2BQ13224 1484 aa11.1□□□□□ -0.63
VPS25P1-201ENST00000455691 SHROOM2Q13796 1616 aa11.07□□□□□ -0.64
VPS25P1-201ENST00000455691 FBLN2P98095 1184 aa11.07□□□□□ -0.64
VPS25P1-201ENST00000455691 AEBP2Q6ZN18 517 aaPredicted RBP11.05□□□□□ -0.64
VPS25P1-201ENST00000455691 CEP170Q5SW79 1584 aa11.03□□□□□ -0.64
VPS25P1-201ENST00000455691 ADAMTS12P58397 1594 aa11.02□□□□□ -0.65
VPS25P1-201ENST00000455691 NUP160Q12769 1436 aa11.01□□□□□ -0.65
VPS25P1-201ENST00000455691 ABCA10Q8WWZ4 1543 aa11.01□□□□□ -0.65
VPS25P1-201ENST00000455691 GRIN2AQ12879 1464 aa11□□□□□ -0.65
VPS25P1-201ENST00000455691 CHMP7Q8WUX9 453 aaPredicted RBP10.99□□□□□ -0.65
VPS25P1-201ENST00000455691 DIP2BQ9P265 1576 aa10.92□□□□□ -0.66
VPS25P1-201ENST00000455691 MAPKBP1O60336 1514 aa10.9□□□□□ -0.66
VPS25P1-201ENST00000455691 ABCC10Q5T3U5 1492 aa10.89□□□□□ -0.67
VPS25P1-201ENST00000455691 BIVM-ERCC5R4GMW8 1640 aa10.89□□□□□ -0.67
VPS25P1-201ENST00000455691 RUSC2Q8N2Y8 1516 aa10.89□□□□□ -0.67
VPS25P1-201ENST00000455691 ADCY10Q96PN6 1610 aa10.87□□□□□ -0.67
VPS25P1-201ENST00000455691 FHAD1B1AJZ9 1412 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms