RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 NISCHQ9Y2I1 1504 aa44.22■■■■■ 4.67
CCDC144B-204ENST00000455629 CCDC180Q9P1Z9 1646 aa39.75■■■■□ 3.95
CCDC144B-204ENST00000455629 ABCC9O60706 1549 aa39.7■■■■□ 3.95
CCDC144B-204ENST00000455629 RB1CC1Q8TDY2 1594 aa37.84■■■■□ 3.65
CCDC144B-204ENST00000455629 NACADO15069 1562 aa37.58■■■■□ 3.61
CCDC144B-204ENST00000455629 DCAF8L2P0C7V8 631 aa37.28■■■■□ 3.56
CCDC144B-204ENST00000455629 DNAJC5BQ9UF47 199 aa37.25■■■■□ 3.55
CCDC144B-204ENST00000455629 MYO15BQ96JP2 1530 aa37.08■■■■□ 3.53
CCDC144B-204ENST00000455629 UNC13AQ9UPW8 1703 aa36.95■■■■□ 3.51
CCDC144B-204ENST00000455629 PABPN1Q86U42 306 aaKnown RBP eCLIP36.93■■■■□ 3.5
CCDC144B-204ENST00000455629 BICRAQ9NZM4 1560 aa36.7■■■■□ 3.46
CCDC144B-204ENST00000455629 ZCCHC6Q5VYS8 1495 aaKnown RBP36.63■■■■□ 3.45
CCDC144B-204ENST00000455629 DCAF1Q9Y4B6 1507 aa36.57■■■■□ 3.44
CCDC144B-204ENST00000455629 SHROOM4Q9ULL8 1493 aa36.3■■■■□ 3.4
CCDC144B-204ENST00000455629 SCRIBQ14160 1630 aa36.13■■■■□ 3.37
CCDC144B-204ENST00000455629 CC2D2AQ9P2K1 1620 aa35.9■■■■□ 3.34
CCDC144B-204ENST00000455629 EIF4G1Q04637 1599 aaKnown RBP35.81■■■■□ 3.32
CCDC144B-204ENST00000455629 CECR2Q9BXF3 1484 aa35.8■■■■□ 3.32
CCDC144B-204ENST00000455629 NCAPD3P42695 1498 aa34.68■■■■□ 3.14
CCDC144B-204ENST00000455629 ATAD2BQ9ULI0 1458 aa34.54■■■■□ 3.12
CCDC144B-204ENST00000455629 SMARCA4P51532 1647 aa34.5■■■■□ 3.11
CCDC144B-204ENST00000455629 SMARCA2P51531 1590 aa34.48■■■■□ 3.11
CCDC144B-204ENST00000455629 HMGXB3Q12766 1538 aa34.43■■■■□ 3.1
CCDC144B-204ENST00000455629 BAZ1AQ9NRL2 1556 aaPredicted RBP34.35■■■■□ 3.09
CCDC144B-204ENST00000455629 DNAJC5Q9H3Z4 198 aa34.31■■■■□ 3.08
CCDC144B-204ENST00000455629 ERCC6Q03468 1493 aa34.31■■■■□ 3.08
CCDC144B-204ENST00000455629 CUX2O14529 1486 aa34.3■■■■□ 3.08
CCDC144B-204ENST00000455629 BAZ1BQ9UIG0 1483 aaKnown RBP34.21■■■■□ 3.07
CCDC144B-204ENST00000455629 PEG3Q9GZU2 1588 aa34.2■■■■□ 3.07
CCDC144B-204ENST00000455629 NESP48681 1621 aa34.08■■■■□ 3.05
CCDC144B-204ENST00000455629 MROH2BQ7Z745 1585 aa34.04■■■■□ 3.04
CCDC144B-204ENST00000455629 LAMC3Q9Y6N6 1575 aa33.91■■■■□ 3.02
CCDC144B-204ENST00000455629 THOC2Q8NI27 1593 aaKnown RBP33.79■■■■□ 3
CCDC144B-204ENST00000455629 PDS5BQ9NTI5 1447 aa33.71■■■□□ 2.99
CCDC144B-204ENST00000455629 KIF21AQ7Z4S6 1674 aa33.68■■■□□ 2.98
CCDC144B-204ENST00000455629 WIZO95785 1651 aa33.63■■■□□ 2.97
CCDC144B-204ENST00000455629 CADPSQ9ULU8 1353 aa33.61■■■□□ 2.97
CCDC144B-204ENST00000455629 MRC2Q9UBG0 1479 aa33.41■■■□□ 2.94
CCDC144B-204ENST00000455629 WDR62O43379 1518 aa33.34■■■□□ 2.93
CCDC144B-204ENST00000455629 RSF1Q96T23 1441 aaPredicted RBP33.33■■■□□ 2.93
CCDC144B-204ENST00000455629 CEP164Q9UPV0 1460 aa33.27■■■□□ 2.92
CCDC144B-204ENST00000455629 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
CCDC144B-204ENST00000455629 CFTRP13569 1480 aa33.23■■■□□ 2.91
CCDC144B-204ENST00000455629 FANCD2Q9BXW9 1451 aa33.22■■■□□ 2.91
CCDC144B-204ENST00000455629 URB2Q14146 1524 aaKnown RBP32.93■■■□□ 2.86
CCDC144B-204ENST00000455629 PRDM2Q13029 1718 aa32.91■■■□□ 2.86
CCDC144B-204ENST00000455629 CCDC88BA6NC98 1476 aa32.84■■■□□ 2.85
CCDC144B-204ENST00000455629 TRIM41Q8WV44 630 aa32.73■■■□□ 2.83
CCDC144B-204ENST00000455629 OSCARQ8IYS5 282 aa32.71■■■□□ 2.83
CCDC144B-204ENST00000455629 IFT140Q96RY7 1462 aa32.61■■■□□ 2.81
CCDC144B-204ENST00000455629 TOPBP1Q92547 1522 aa32.58■■■□□ 2.81
CCDC144B-204ENST00000455629 ABCC8Q09428 1581 aa32.57■■■□□ 2.8
CCDC144B-204ENST00000455629 ZNF608Q9ULD9 1512 aaPredicted RBP32.51■■■□□ 2.8
CCDC144B-204ENST00000455629 DNMBPQ6XZF7 1577 aa32.48■■■□□ 2.79
CCDC144B-204ENST00000455629 EIF4G3O43432 1585 aaKnown RBP32.36■■■□□ 2.77
CCDC144B-204ENST00000455629 TARBP1Q13395 1621 aaKnown RBP32.3■■■□□ 2.76
CCDC144B-204ENST00000455629 RIMBP3CA6NJZ7 1639 aa32.27■■■□□ 2.76
CCDC144B-204ENST00000455629 RIMBP3BA6NNM3 1639 aa32.27■■■□□ 2.76
CCDC144B-204ENST00000455629 RIMBP3Q9UFD9 1639 aa32.27■■■□□ 2.76
CCDC144B-204ENST00000455629 POLA1P09884 1462 aaPredicted RBP32.24■■■□□ 2.75
CCDC144B-204ENST00000455629 AQRO60306 1485 aaKnown RBP eCLIP32.23■■■□□ 2.75
CCDC144B-204ENST00000455629 ARHGEF11O15085 1522 aa32.17■■■□□ 2.74
CCDC144B-204ENST00000455629 CHD1O14646 1710 aa32.13■■■□□ 2.73
CCDC144B-204ENST00000455629 SOGA1O94964 1423 aa32.1■■■□□ 2.73
CCDC144B-204ENST00000455629 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
CCDC144B-204ENST00000455629 WDR97A6NE52 1622 aa32.04■■■□□ 2.72
CCDC144B-204ENST00000455629 FGD5Q6ZNL6 1462 aa32.03■■■□□ 2.72
CCDC144B-204ENST00000455629 FBLN2P98095 1184 aa32.02■■■□□ 2.72
CCDC144B-204ENST00000455629 TDRD9Q8NDG6 1382 aaKnown RBP32.02■■■□□ 2.72
CCDC144B-204ENST00000455629 CUX1P39880 1505 aa32■■■□□ 2.71
CCDC144B-204ENST00000455629 CYB5RLQ6IPT4 315 aa31.91■■■□□ 2.7
CCDC144B-204ENST00000455629 SNAPC4Q5SXM2 1469 aa31.91■■■□□ 2.7
CCDC144B-204ENST00000455629 MAGI1Q96QZ7 1491 aaPredicted RBP31.87■■■□□ 2.69
CCDC144B-204ENST00000455629 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
CCDC144B-204ENST00000455629 ARAP1Q96P48 1450 aa31.84■■■□□ 2.69
CCDC144B-204ENST00000455629 CHMP7Q8WUX9 453 aaPredicted RBP31.81■■■□□ 2.68
CCDC144B-204ENST00000455629 SYNJ1O43426 1573 aa31.77■■■□□ 2.68
CCDC144B-204ENST00000455629 CLASP1Q7Z460 1538 aa31.77■■■□□ 2.68
CCDC144B-204ENST00000455629 SUPT5HO00267 1087 aaKnown RBP31.77■■■□□ 2.68
CCDC144B-204ENST00000455629 SYNJ2O15056 1496 aa31.75■■■□□ 2.67
CCDC144B-204ENST00000455629 GAPVD1Q14C86 1478 aa31.72■■■□□ 2.67
CCDC144B-204ENST00000455629 PBRM1Q86U86 1689 aa31.7■■■□□ 2.67
CCDC144B-204ENST00000455629 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.66
CCDC144B-204ENST00000455629 ABCA5Q8WWZ7 1642 aa31.64■■■□□ 2.66
CCDC144B-204ENST00000455629 TRHP20396 242 aaPredicted RBP31.57■■■□□ 2.64
CCDC144B-204ENST00000455629 WRNQ14191 1432 aaPredicted RBP eCLIP31.56■■■□□ 2.64
CCDC144B-204ENST00000455629 TOP2BQ02880 1626 aa31.49■■■□□ 2.63
CCDC144B-204ENST00000455629 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
CCDC144B-204ENST00000455629 GRIN2AQ12879 1464 aa31.43■■■□□ 2.62
CCDC144B-204ENST00000455629 ADAMTS12P58397 1594 aa31.4■■■□□ 2.62
CCDC144B-204ENST00000455629 NUP160Q12769 1436 aa31.33■■■□□ 2.61
CCDC144B-204ENST00000455629 FHAD1B1AJZ9 1412 aa31.32■■■□□ 2.61
CCDC144B-204ENST00000455629 ERICH3Q5RHP9 1530 aa31.31■■■□□ 2.6
CCDC144B-204ENST00000455629 CEP170Q5SW79 1584 aa31.3■■■□□ 2.6
CCDC144B-204ENST00000455629 ERCC6L2Q5T890 1561 aa31.23■■■□□ 2.59
CCDC144B-204ENST00000455629 SHROOM2Q13796 1616 aa31.21■■■□□ 2.59
CCDC144B-204ENST00000455629 PRG4Q92954 1404 aaPredicted RBP31.01■■■□□ 2.55
CCDC144B-204ENST00000455629 JPH4Q96JJ6 628 aa30.99■■■□□ 2.55
CCDC144B-204ENST00000455629 RUSC2Q8N2Y8 1516 aa30.96■■■□□ 2.55
CCDC144B-204ENST00000455629 KIF27Q86VH2 1401 aa30.89■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms