RNA–Protein interactions for RNA: ENST00000455527.5

RFTN1P1-202, Transcript of raftlin, lipid raft linker 1 pseudogene 1, humanhuman

BASIC

Gene RFTN1P1, Length 996 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1P1-202ENST00000455527 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
RFTN1P1-202ENST00000455527 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
RFTN1P1-202ENST00000455527 ABCC9O60706 1549 aa21.88■■□□□ 1.09
RFTN1P1-202ENST00000455527 RB1CC1Q8TDY2 1594 aa21.04■□□□□ 0.96
RFTN1P1-202ENST00000455527 NACADO15069 1562 aa20.99■□□□□ 0.95
RFTN1P1-202ENST00000455527 MYO15BQ96JP2 1530 aa20.87■□□□□ 0.93
RFTN1P1-202ENST00000455527 ZCCHC6Q5VYS8 1495 aaKnown RBP20.79■□□□□ 0.92
RFTN1P1-202ENST00000455527 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
RFTN1P1-202ENST00000455527 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
RFTN1P1-202ENST00000455527 UNC13AQ9UPW8 1703 aa20.55■□□□□ 0.88
RFTN1P1-202ENST00000455527 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
RFTN1P1-202ENST00000455527 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
RFTN1P1-202ENST00000455527 SHROOM4Q9ULL8 1493 aa20.27■□□□□ 0.84
RFTN1P1-202ENST00000455527 SCRIBQ14160 1630 aa20.26■□□□□ 0.83
RFTN1P1-202ENST00000455527 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
RFTN1P1-202ENST00000455527 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
RFTN1P1-202ENST00000455527 CC2D2AQ9P2K1 1620 aa19.82■□□□□ 0.76
RFTN1P1-202ENST00000455527 CECR2Q9BXF3 1484 aa19.71■□□□□ 0.75
RFTN1P1-202ENST00000455527 SMARCA4P51532 1647 aa19.4■□□□□ 0.7
RFTN1P1-202ENST00000455527 BAZ1AQ9NRL2 1556 aaPredicted RBP19.36■□□□□ 0.69
RFTN1P1-202ENST00000455527 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
RFTN1P1-202ENST00000455527 ATAD2BQ9ULI0 1458 aa19.34■□□□□ 0.69
RFTN1P1-202ENST00000455527 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
RFTN1P1-202ENST00000455527 HMGXB3Q12766 1538 aa19.28■□□□□ 0.68
RFTN1P1-202ENST00000455527 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.68
RFTN1P1-202ENST00000455527 MROH2BQ7Z745 1585 aa19.2■□□□□ 0.66
RFTN1P1-202ENST00000455527 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
RFTN1P1-202ENST00000455527 WIZO95785 1651 aa18.98■□□□□ 0.63
RFTN1P1-202ENST00000455527 RSF1Q96T23 1441 aaPredicted RBP18.92■□□□□ 0.62
RFTN1P1-202ENST00000455527 NESP48681 1621 aa18.89■□□□□ 0.62
RFTN1P1-202ENST00000455527 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.61
RFTN1P1-202ENST00000455527 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
RFTN1P1-202ENST00000455527 TOP2AP11388 1531 aaKnown RBP18.82■□□□□ 0.6
RFTN1P1-202ENST00000455527 CUX2O14529 1486 aa18.81■□□□□ 0.6
RFTN1P1-202ENST00000455527 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
RFTN1P1-202ENST00000455527 PDS5BQ9NTI5 1447 aa18.73■□□□□ 0.59
RFTN1P1-202ENST00000455527 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
RFTN1P1-202ENST00000455527 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
RFTN1P1-202ENST00000455527 CFTRP13569 1480 aa18.64■□□□□ 0.57
RFTN1P1-202ENST00000455527 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
RFTN1P1-202ENST00000455527 CCDC88BA6NC98 1476 aa18.54■□□□□ 0.56
RFTN1P1-202ENST00000455527 FANCD2Q9BXW9 1451 aa18.54■□□□□ 0.56
RFTN1P1-202ENST00000455527 CEP164Q9UPV0 1460 aa18.54■□□□□ 0.56
RFTN1P1-202ENST00000455527 WDR62O43379 1518 aa18.54■□□□□ 0.56
RFTN1P1-202ENST00000455527 PRDM2Q13029 1718 aa18.5■□□□□ 0.55
RFTN1P1-202ENST00000455527 URB2Q14146 1524 aaKnown RBP18.38■□□□□ 0.53
RFTN1P1-202ENST00000455527 DNAJC5Q9H3Z4 198 aa18.34■□□□□ 0.53
RFTN1P1-202ENST00000455527 ABCC8Q09428 1581 aa18.24■□□□□ 0.51
RFTN1P1-202ENST00000455527 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
RFTN1P1-202ENST00000455527 DNMBPQ6XZF7 1577 aa18.22■□□□□ 0.51
RFTN1P1-202ENST00000455527 SUPT5HO00267 1087 aaKnown RBP18.18■□□□□ 0.5
RFTN1P1-202ENST00000455527 IFT140Q96RY7 1462 aa18.18■□□□□ 0.5
RFTN1P1-202ENST00000455527 POLA1P09884 1462 aaPredicted RBP18.08■□□□□ 0.49
RFTN1P1-202ENST00000455527 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.48
RFTN1P1-202ENST00000455527 TARBP1Q13395 1621 aaKnown RBP18.07■□□□□ 0.48
RFTN1P1-202ENST00000455527 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
RFTN1P1-202ENST00000455527 CUX1P39880 1505 aa18.03■□□□□ 0.48
RFTN1P1-202ENST00000455527 FGD5Q6ZNL6 1462 aa18■□□□□ 0.47
RFTN1P1-202ENST00000455527 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
RFTN1P1-202ENST00000455527 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
RFTN1P1-202ENST00000455527 SOGA1O94964 1423 aa17.95■□□□□ 0.46
RFTN1P1-202ENST00000455527 AEBP2Q6ZN18 517 aaPredicted RBP17.92■□□□□ 0.46
RFTN1P1-202ENST00000455527 AQRO60306 1485 aaKnown RBP eCLIP17.92■□□□□ 0.46
RFTN1P1-202ENST00000455527 OSCARQ8IYS5 282 aa17.89■□□□□ 0.45
RFTN1P1-202ENST00000455527 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
RFTN1P1-202ENST00000455527 TOP2BQ02880 1626 aa17.86■□□□□ 0.45
RFTN1P1-202ENST00000455527 TDRD9Q8NDG6 1382 aaKnown RBP17.85■□□□□ 0.45
RFTN1P1-202ENST00000455527 ABCA10Q8WWZ4 1543 aa17.84■□□□□ 0.45
RFTN1P1-202ENST00000455527 WRNQ14191 1432 aaPredicted RBP eCLIP17.84■□□□□ 0.45
RFTN1P1-202ENST00000455527 SYNJ1O43426 1573 aa17.83■□□□□ 0.44
RFTN1P1-202ENST00000455527 CHD1O14646 1710 aa17.81■□□□□ 0.44
RFTN1P1-202ENST00000455527 ABCA5Q8WWZ7 1642 aa17.8■□□□□ 0.44
RFTN1P1-202ENST00000455527 GRIN2BQ13224 1484 aa17.8■□□□□ 0.44
RFTN1P1-202ENST00000455527 SNAPC4Q5SXM2 1469 aa17.8■□□□□ 0.44
RFTN1P1-202ENST00000455527 MAGI1Q96QZ7 1491 aaPredicted RBP17.79■□□□□ 0.44
RFTN1P1-202ENST00000455527 GAPVD1Q14C86 1478 aa17.76■□□□□ 0.43
RFTN1P1-202ENST00000455527 PBRM1Q86U86 1689 aa17.76■□□□□ 0.43
RFTN1P1-202ENST00000455527 SYNJ2O15056 1496 aa17.71■□□□□ 0.43
RFTN1P1-202ENST00000455527 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
RFTN1P1-202ENST00000455527 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
RFTN1P1-202ENST00000455527 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
RFTN1P1-202ENST00000455527 ARHGEF11O15085 1522 aa17.68■□□□□ 0.42
RFTN1P1-202ENST00000455527 CLASP1Q7Z460 1538 aa17.67■□□□□ 0.42
RFTN1P1-202ENST00000455527 FBLN2P98095 1184 aa17.65■□□□□ 0.42
RFTN1P1-202ENST00000455527 ADAMTS12P58397 1594 aa17.64■□□□□ 0.41
RFTN1P1-202ENST00000455527 ERICH3Q5RHP9 1530 aa17.63■□□□□ 0.41
RFTN1P1-202ENST00000455527 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
RFTN1P1-202ENST00000455527 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
RFTN1P1-202ENST00000455527 GRIN2AQ12879 1464 aa17.58■□□□□ 0.41
RFTN1P1-202ENST00000455527 FHAD1B1AJZ9 1412 aa17.57■□□□□ 0.4
RFTN1P1-202ENST00000455527 ARAP1Q96P48 1450 aa17.53■□□□□ 0.4
RFTN1P1-202ENST00000455527 NUP160Q12769 1436 aa17.53■□□□□ 0.4
RFTN1P1-202ENST00000455527 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
RFTN1P1-202ENST00000455527 KIF27Q86VH2 1401 aa17.48■□□□□ 0.39
RFTN1P1-202ENST00000455527 CUL7Q14999 1698 aa17.44■□□□□ 0.38
RFTN1P1-202ENST00000455527 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
RFTN1P1-202ENST00000455527 IGF1RP08069 1367 aa17.41■□□□□ 0.38
RFTN1P1-202ENST00000455527 CYB5RLQ6IPT4 315 aa17.41■□□□□ 0.38
RFTN1P1-202ENST00000455527 RUSC2Q8N2Y8 1516 aa17.39■□□□□ 0.37
RFTN1P1-202ENST00000455527 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms