RNA–Protein interactions for RNA: ENST00000455320.5

SLC40A1-206, Transcript of solute carrier family 40 member 1, humanhuman

TSL 3

Gene SLC40A1, Length 592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-206ENST00000455320 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
SLC40A1-206ENST00000455320 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
SLC40A1-206ENST00000455320 ABCC9O60706 1549 aa24.31■■□□□ 1.48
SLC40A1-206ENST00000455320 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
SLC40A1-206ENST00000455320 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
SLC40A1-206ENST00000455320 NACADO15069 1562 aa23.21■■□□□ 1.31
SLC40A1-206ENST00000455320 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
SLC40A1-206ENST00000455320 MYO15BQ96JP2 1530 aa22.94■■□□□ 1.26
SLC40A1-206ENST00000455320 DCAF1Q9Y4B6 1507 aa22.9■■□□□ 1.26
SLC40A1-206ENST00000455320 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
SLC40A1-206ENST00000455320 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
SLC40A1-206ENST00000455320 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
SLC40A1-206ENST00000455320 BICRAQ9NZM4 1560 aa22.58■■□□□ 1.2
SLC40A1-206ENST00000455320 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
SLC40A1-206ENST00000455320 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
SLC40A1-206ENST00000455320 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
SLC40A1-206ENST00000455320 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
SLC40A1-206ENST00000455320 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.07
SLC40A1-206ENST00000455320 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
SLC40A1-206ENST00000455320 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
SLC40A1-206ENST00000455320 MROH2BQ7Z745 1585 aa21.5■■□□□ 1.03
SLC40A1-206ENST00000455320 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.03
SLC40A1-206ENST00000455320 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
SLC40A1-206ENST00000455320 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
SLC40A1-206ENST00000455320 WIZO95785 1651 aa21.35■■□□□ 1.01
SLC40A1-206ENST00000455320 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
SLC40A1-206ENST00000455320 HMGXB3Q12766 1538 aa21.33■■□□□ 1
SLC40A1-206ENST00000455320 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
SLC40A1-206ENST00000455320 RSF1Q96T23 1441 aaPredicted RBP21.2■□□□□ 0.98
SLC40A1-206ENST00000455320 NESP48681 1621 aa21.04■□□□□ 0.96
SLC40A1-206ENST00000455320 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
SLC40A1-206ENST00000455320 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
SLC40A1-206ENST00000455320 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.93
SLC40A1-206ENST00000455320 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
SLC40A1-206ENST00000455320 KIF21AQ7Z4S6 1674 aa20.84■□□□□ 0.93
SLC40A1-206ENST00000455320 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
SLC40A1-206ENST00000455320 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
SLC40A1-206ENST00000455320 PDS5BQ9NTI5 1447 aa20.71■□□□□ 0.91
SLC40A1-206ENST00000455320 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
SLC40A1-206ENST00000455320 PRDM2Q13029 1718 aa20.67■□□□□ 0.9
SLC40A1-206ENST00000455320 CFTRP13569 1480 aa20.66■□□□□ 0.9
SLC40A1-206ENST00000455320 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
SLC40A1-206ENST00000455320 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
SLC40A1-206ENST00000455320 CUX2O14529 1486 aa20.58■□□□□ 0.89
SLC40A1-206ENST00000455320 MRC2Q9UBG0 1479 aa20.56■□□□□ 0.88
SLC40A1-206ENST00000455320 WDR62O43379 1518 aa20.48■□□□□ 0.87
SLC40A1-206ENST00000455320 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
SLC40A1-206ENST00000455320 TOPBP1Q92547 1522 aa20.3■□□□□ 0.84
SLC40A1-206ENST00000455320 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
SLC40A1-206ENST00000455320 ABCC8Q09428 1581 aa20.19■□□□□ 0.82
SLC40A1-206ENST00000455320 CUX1P39880 1505 aa20.17■□□□□ 0.82
SLC40A1-206ENST00000455320 POLA1P09884 1462 aaPredicted RBP20.12■□□□□ 0.81
SLC40A1-206ENST00000455320 IFT140Q96RY7 1462 aa20.12■□□□□ 0.81
SLC40A1-206ENST00000455320 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
SLC40A1-206ENST00000455320 ZNF608Q9ULD9 1512 aaPredicted RBP20.11■□□□□ 0.81
SLC40A1-206ENST00000455320 RAD54L2Q9Y4B4 1467 aa20.1■□□□□ 0.81
SLC40A1-206ENST00000455320 TARBP1Q13395 1621 aaKnown RBP20.07■□□□□ 0.8
SLC40A1-206ENST00000455320 EIF4G3O43432 1585 aaKnown RBP20.07■□□□□ 0.8
SLC40A1-206ENST00000455320 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
SLC40A1-206ENST00000455320 SOGA1O94964 1423 aa20.02■□□□□ 0.8
SLC40A1-206ENST00000455320 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.8
SLC40A1-206ENST00000455320 BIVM-ERCC5R4GMW8 1640 aa20.01■□□□□ 0.79
SLC40A1-206ENST00000455320 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.792e-6■■■□□ 18.3
SLC40A1-206ENST00000455320 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
SLC40A1-206ENST00000455320 WDR97A6NE52 1622 aa19.97■□□□□ 0.79
SLC40A1-206ENST00000455320 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
SLC40A1-206ENST00000455320 PBRM1Q86U86 1689 aa19.9■□□□□ 0.78
SLC40A1-206ENST00000455320 DNAJC5Q9H3Z4 198 aa19.87■□□□□ 0.77
SLC40A1-206ENST00000455320 CHD1O14646 1710 aa19.87■□□□□ 0.77
SLC40A1-206ENST00000455320 ABCA10Q8WWZ4 1543 aa19.84■□□□□ 0.77
SLC40A1-206ENST00000455320 SNAPC4Q5SXM2 1469 aa19.84■□□□□ 0.77
SLC40A1-206ENST00000455320 ABCA5Q8WWZ7 1642 aa19.83■□□□□ 0.76
SLC40A1-206ENST00000455320 FBLN2P98095 1184 aa19.82■□□□□ 0.76
SLC40A1-206ENST00000455320 GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
SLC40A1-206ENST00000455320 GRIN2BQ13224 1484 aa19.78■□□□□ 0.76
SLC40A1-206ENST00000455320 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
SLC40A1-206ENST00000455320 MAGI1Q96QZ7 1491 aaPredicted RBP19.7■□□□□ 0.74
SLC40A1-206ENST00000455320 ADAMTS12P58397 1594 aa19.67■□□□□ 0.74
SLC40A1-206ENST00000455320 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
SLC40A1-206ENST00000455320 SYNJ2O15056 1496 aa19.65■□□□□ 0.74
SLC40A1-206ENST00000455320 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
SLC40A1-206ENST00000455320 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
SLC40A1-206ENST00000455320 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
SLC40A1-206ENST00000455320 GRIN2AQ12879 1464 aa19.55■□□□□ 0.72
SLC40A1-206ENST00000455320 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
SLC40A1-206ENST00000455320 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
SLC40A1-206ENST00000455320 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
SLC40A1-206ENST00000455320 FHAD1B1AJZ9 1412 aa19.54■□□□□ 0.72
SLC40A1-206ENST00000455320 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
SLC40A1-206ENST00000455320 CEP170Q5SW79 1584 aa19.51■□□□□ 0.71
SLC40A1-206ENST00000455320 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
SLC40A1-206ENST00000455320 CUL7Q14999 1698 aa19.5■□□□□ 0.71
SLC40A1-206ENST00000455320 ARHGEF11O15085 1522 aa19.49■□□□□ 0.71
SLC40A1-206ENST00000455320 IGF1RP08069 1367 aa19.44■□□□□ 0.7
SLC40A1-206ENST00000455320 NUP160Q12769 1436 aa19.4■□□□□ 0.7
SLC40A1-206ENST00000455320 CARMIL1Q5VZK9 1371 aa19.39■□□□□ 0.69
SLC40A1-206ENST00000455320 ERCC6L2Q5T890 1561 aa19.35■□□□□ 0.69
SLC40A1-206ENST00000455320 ARAP1Q96P48 1450 aa19.35■□□□□ 0.69
SLC40A1-206ENST00000455320 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
SLC40A1-206ENST00000455320 FAM9AQ8IZU1 332 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms