RNA–Protein interactions for RNA: ENST00000455301.2

CNTNAP2-202, Transcript of contactin associated protein like 2, humanhuman

TSL 3

Gene CNTNAP2, Length 511 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-202ENST00000455301 NISCHQ9Y2I1 1504 aa15.61■□□□□ 0.09
CNTNAP2-202ENST00000455301 ABCC9O60706 1549 aa14.6□□□□□ -0.07
CNTNAP2-202ENST00000455301 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
CNTNAP2-202ENST00000455301 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
CNTNAP2-202ENST00000455301 PABPN1Q86U42 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
CNTNAP2-202ENST00000455301 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
CNTNAP2-202ENST00000455301 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
CNTNAP2-202ENST00000455301 NACADO15069 1562 aa13.42□□□□□ -0.26
CNTNAP2-202ENST00000455301 BICRAQ9NZM4 1560 aa13.28□□□□□ -0.28
CNTNAP2-202ENST00000455301 UNC13AQ9UPW8 1703 aa13.23□□□□□ -0.29
CNTNAP2-202ENST00000455301 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
CNTNAP2-202ENST00000455301 DNAJC5Q9H3Z4 198 aa13.13□□□□□ -0.31
CNTNAP2-202ENST00000455301 CC2D2AQ9P2K1 1620 aa13.09□□□□□ -0.31
CNTNAP2-202ENST00000455301 MYO15BQ96JP2 1530 aa13.08□□□□□ -0.32
CNTNAP2-202ENST00000455301 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
CNTNAP2-202ENST00000455301 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
CNTNAP2-202ENST00000455301 SCRIBQ14160 1630 aa12.91□□□□□ -0.34
CNTNAP2-202ENST00000455301 ZCCHC6Q5VYS8 1495 aaKnown RBP12.86□□□□□ -0.35
CNTNAP2-202ENST00000455301 DCAF1Q9Y4B6 1507 aa12.8□□□□□ -0.36
CNTNAP2-202ENST00000455301 CUX2O14529 1486 aa12.63□□□□□ -0.39
CNTNAP2-202ENST00000455301 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
CNTNAP2-202ENST00000455301 AEBP2Q6ZN18 517 aaPredicted RBP12.5□□□□□ -0.41
CNTNAP2-202ENST00000455301 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
CNTNAP2-202ENST00000455301 NCAPD3P42695 1498 aa12.45□□□□□ -0.42
CNTNAP2-202ENST00000455301 NESP48681 1621 aa12.44□□□□□ -0.42
CNTNAP2-202ENST00000455301 ATAD2BQ9ULI0 1458 aa12.39□□□□□ -0.43
CNTNAP2-202ENST00000455301 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
CNTNAP2-202ENST00000455301 HMGXB3Q12766 1538 aa12.27□□□□□ -0.44
CNTNAP2-202ENST00000455301 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
CNTNAP2-202ENST00000455301 BAZ1BQ9UIG0 1483 aaKnown RBP12.23□□□□□ -0.45
CNTNAP2-202ENST00000455301 SMARCA4P51532 1647 aa12.22□□□□□ -0.45
CNTNAP2-202ENST00000455301 PDS5BQ9NTI5 1447 aa12.17□□□□□ -0.46
CNTNAP2-202ENST00000455301 CHIC1Q5VXU3 224 aa12.16□□□□□ -0.46
CNTNAP2-202ENST00000455301 LAMC3Q9Y6N6 1575 aa12.16□□□□□ -0.46
CNTNAP2-202ENST00000455301 KIF21AQ7Z4S6 1674 aa12.14□□□□□ -0.47
CNTNAP2-202ENST00000455301 BAZ1AQ9NRL2 1556 aaPredicted RBP12.1□□□□□ -0.47
CNTNAP2-202ENST00000455301 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.47
CNTNAP2-202ENST00000455301 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.48
CNTNAP2-202ENST00000455301 MROH2BQ7Z745 1585 aa12.07□□□□□ -0.48
CNTNAP2-202ENST00000455301 OSCARQ8IYS5 282 aa12.07□□□□□ -0.48
CNTNAP2-202ENST00000455301 PEG3Q9GZU2 1588 aa12.07□□□□□ -0.48
CNTNAP2-202ENST00000455301 WDR62O43379 1518 aa12.05□□□□□ -0.48
CNTNAP2-202ENST00000455301 CEP164Q9UPV0 1460 aa11.96□□□□□ -0.49
CNTNAP2-202ENST00000455301 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
CNTNAP2-202ENST00000455301 RIMBP3CA6NJZ7 1639 aa11.89□□□□□ -0.51
CNTNAP2-202ENST00000455301 RIMBP3BA6NNM3 1639 aa11.89□□□□□ -0.51
CNTNAP2-202ENST00000455301 RIMBP3Q9UFD9 1639 aa11.89□□□□□ -0.51
CNTNAP2-202ENST00000455301 URB2Q14146 1524 aaKnown RBP11.88□□□□□ -0.51
CNTNAP2-202ENST00000455301 CYB5RLQ6IPT4 315 aa11.87□□□□□ -0.51
CNTNAP2-202ENST00000455301 WIZO95785 1651 aa11.86□□□□□ -0.51
CNTNAP2-202ENST00000455301 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
CNTNAP2-202ENST00000455301 CFTRP13569 1480 aa11.85□□□□□ -0.51
CNTNAP2-202ENST00000455301 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
CNTNAP2-202ENST00000455301 ZNF608Q9ULD9 1512 aaPredicted RBP11.83□□□□□ -0.52
CNTNAP2-202ENST00000455301 IFT140Q96RY7 1462 aa11.74□□□□□ -0.53
CNTNAP2-202ENST00000455301 ARAP1Q96P48 1450 aa11.73□□□□□ -0.53
CNTNAP2-202ENST00000455301 FBLN2P98095 1184 aa11.71□□□□□ -0.53
CNTNAP2-202ENST00000455301 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
CNTNAP2-202ENST00000455301 AQRO60306 1485 aaKnown RBP eCLIP11.68□□□□□ -0.54
CNTNAP2-202ENST00000455301 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
CNTNAP2-202ENST00000455301 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
CNTNAP2-202ENST00000455301 EIF4G3O43432 1585 aaKnown RBP11.65□□□□□ -0.54
CNTNAP2-202ENST00000455301 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
CNTNAP2-202ENST00000455301 CHD1O14646 1710 aa11.59□□□□□ -0.55
CNTNAP2-202ENST00000455301 TDRD9Q8NDG6 1382 aaKnown RBP11.56□□□□□ -0.56
CNTNAP2-202ENST00000455301 RAD54L2Q9Y4B4 1467 aa11.56□□□□□ -0.56
CNTNAP2-202ENST00000455301 TARBP1Q13395 1621 aaKnown RBP11.55□□□□□ -0.56
CNTNAP2-202ENST00000455301 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
CNTNAP2-202ENST00000455301 DNMBPQ6XZF7 1577 aa11.54□□□□□ -0.56
CNTNAP2-202ENST00000455301 POLA1P09884 1462 aaPredicted RBP11.54□□□□□ -0.56
CNTNAP2-202ENST00000455301 SNAPC4Q5SXM2 1469 aa11.52□□□□□ -0.56
CNTNAP2-202ENST00000455301 CHMP7Q8WUX9 453 aaPredicted RBP11.52□□□□□ -0.57
CNTNAP2-202ENST00000455301 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
CNTNAP2-202ENST00000455301 CLASP1Q7Z460 1538 aa11.5□□□□□ -0.57
CNTNAP2-202ENST00000455301 SOGA1O94964 1423 aa11.49□□□□□ -0.57
CNTNAP2-202ENST00000455301 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
CNTNAP2-202ENST00000455301 SYNJ1O43426 1573 aa11.43□□□□□ -0.58
CNTNAP2-202ENST00000455301 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
CNTNAP2-202ENST00000455301 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
CNTNAP2-202ENST00000455301 SYNJ2O15056 1496 aa11.4□□□□□ -0.58
CNTNAP2-202ENST00000455301 GRIN2BQ13224 1484 aa11.4□□□□□ -0.58
CNTNAP2-202ENST00000455301 ERCC6L2Q5T890 1561 aa11.37□□□□□ -0.59
CNTNAP2-202ENST00000455301 CUX1P39880 1505 aa11.35□□□□□ -0.59
CNTNAP2-202ENST00000455301 WDR97A6NE52 1622 aa11.31□□□□□ -0.6
CNTNAP2-202ENST00000455301 ILDR1Q86SU0 546 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP2-202ENST00000455301 KDM4FA0A1W2PPD8 638 aa11.27□□□□□ -0.61
CNTNAP2-202ENST00000455301 GRIN2AQ12879 1464 aa11.26□□□□□ -0.61
CNTNAP2-202ENST00000455301 CEP170Q5SW79 1584 aa11.25□□□□□ -0.61
CNTNAP2-202ENST00000455301 FAM69CQ0P6D2 419 aa11.25□□□□□ -0.61
CNTNAP2-202ENST00000455301 PBRM1Q86U86 1689 aa11.24□□□□□ -0.61
CNTNAP2-202ENST00000455301 NUP160Q12769 1436 aa11.24□□□□□ -0.61
CNTNAP2-202ENST00000455301 ABCA10Q8WWZ4 1543 aa11.23□□□□□ -0.61
CNTNAP2-202ENST00000455301 ABCA5Q8WWZ7 1642 aa11.22□□□□□ -0.61
CNTNAP2-202ENST00000455301 PRG4Q92954 1404 aaPredicted RBP11.19□□□□□ -0.62
CNTNAP2-202ENST00000455301 KIF13AQ9H1H9 1805 aa11.19□□□□□ -0.62
CNTNAP2-202ENST00000455301 ADAMTS12P58397 1594 aa11.18□□□□□ -0.62
CNTNAP2-202ENST00000455301 ABCC10Q5T3U5 1492 aa11.18□□□□□ -0.62
CNTNAP2-202ENST00000455301 JPH4Q96JJ6 628 aa11.17□□□□□ -0.62
CNTNAP2-202ENST00000455301 FHAD1B1AJZ9 1412 aa11.16□□□□□ -0.62
CNTNAP2-202ENST00000455301 SHROOM2Q13796 1616 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms