RNA–Protein interactions for RNA: ENST00000455279.6

CCHCR1-209, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 676 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-209ENST00000455279 NISCHQ9Y2I1 1504 aa50.44■■■■■ 5.67
CCHCR1-209ENST00000455279 CCDC180Q9P1Z9 1646 aa44.94■■■■■ 4.79
CCHCR1-209ENST00000455279 ABCC9O60706 1549 aa44.63■■■■■ 4.73
CCHCR1-209ENST00000455279 RB1CC1Q8TDY2 1594 aa42.53■■■■■ 4.4
CCHCR1-209ENST00000455279 DCAF8L2P0C7V8 631 aa42.38■■■■■ 4.37
CCHCR1-209ENST00000455279 NACADO15069 1562 aa42.35■■■■■ 4.37
CCHCR1-209ENST00000455279 ZCCHC6Q5VYS8 1495 aaKnown RBP41.93■■■■■ 4.3
CCHCR1-209ENST00000455279 MYO15BQ96JP2 1530 aa41.89■■■■■ 4.3
CCHCR1-209ENST00000455279 UNC13AQ9UPW8 1703 aa41.76■■■■■ 4.28
CCHCR1-209ENST00000455279 PABPN1Q86U42 306 aaKnown RBP eCLIP41.67■■■■■ 4.26
CCHCR1-209ENST00000455279 DCAF1Q9Y4B6 1507 aa41.58■■■■■ 4.25
CCHCR1-209ENST00000455279 DNAJC5BQ9UF47 199 aa41.52■■■■■ 4.24
CCHCR1-209ENST00000455279 BICRAQ9NZM4 1560 aa41.46■■■■■ 4.23
CCHCR1-209ENST00000455279 SCRIBQ14160 1630 aa41.16■■■■■ 4.18
CCHCR1-209ENST00000455279 SHROOM4Q9ULL8 1493 aa40.64■■■■■ 4.1
CCHCR1-209ENST00000455279 EIF4G1Q04637 1599 aaKnown RBP40.31■■■■■ 4.04
CCHCR1-209ENST00000455279 CC2D2AQ9P2K1 1620 aa40.3■■■■■ 4.04
CCHCR1-209ENST00000455279 CECR2Q9BXF3 1484 aa40.07■■■■■ 4
CCHCR1-209ENST00000455279 SMARCA4P51532 1647 aa39.25■■■■□ 3.87
CCHCR1-209ENST00000455279 ATAD2BQ9ULI0 1458 aa39.16■■■■□ 3.86
CCHCR1-209ENST00000455279 NCAPD3P42695 1498 aa39.14■■■■□ 3.86
CCHCR1-209ENST00000455279 BAZ1AQ9NRL2 1556 aaPredicted RBP39.04■■■■□ 3.84
CCHCR1-209ENST00000455279 MROH2BQ7Z745 1585 aa38.97■■■■□ 3.83
CCHCR1-209ENST00000455279 SMARCA2P51531 1590 aa38.96■■■■□ 3.83
CCHCR1-209ENST00000455279 HMGXB3Q12766 1538 aa38.89■■■■□ 3.82
CCHCR1-209ENST00000455279 PEG3Q9GZU2 1588 aa38.8■■■■□ 3.8
CCHCR1-209ENST00000455279 BAZ1BQ9UIG0 1483 aaKnown RBP38.76■■■■□ 3.8
CCHCR1-209ENST00000455279 NESP48681 1621 aa38.55■■■■□ 3.76
CCHCR1-209ENST00000455279 WIZO95785 1651 aa38.53■■■■□ 3.76
CCHCR1-209ENST00000455279 ERCC6Q03468 1493 aa38.36■■■■□ 3.73
CCHCR1-209ENST00000455279 RSF1Q96T23 1441 aaPredicted RBP38.3■■■■□ 3.72
CCHCR1-209ENST00000455279 LAMC3Q9Y6N6 1575 aa38.14■■■■□ 3.7
CCHCR1-209ENST00000455279 CUX2O14529 1486 aa38.08■■■■□ 3.69
CCHCR1-209ENST00000455279 KIF21AQ7Z4S6 1674 aa38.01■■■■□ 3.67
CCHCR1-209ENST00000455279 TOP2AP11388 1531 aaKnown RBP37.98■■■■□ 3.67
CCHCR1-209ENST00000455279 CADPSQ9ULU8 1353 aa37.98■■■■□ 3.67
CCHCR1-209ENST00000455279 THOC2Q8NI27 1593 aaKnown RBP37.97■■■■□ 3.67
CCHCR1-209ENST00000455279 PDS5BQ9NTI5 1447 aa37.87■■■■□ 3.65
CCHCR1-209ENST00000455279 CFTRP13569 1480 aa37.67■■■■□ 3.62
CCHCR1-209ENST00000455279 CCDC88BA6NC98 1476 aa37.6■■■■□ 3.61
CCHCR1-209ENST00000455279 MRC2Q9UBG0 1479 aa37.6■■■■□ 3.61
CCHCR1-209ENST00000455279 FANCD2Q9BXW9 1451 aa37.58■■■■□ 3.61
CCHCR1-209ENST00000455279 CEP164Q9UPV0 1460 aa37.53■■■■□ 3.6
CCHCR1-209ENST00000455279 DNAJC5Q9H3Z4 198 aa37.53■■■■□ 3.6
CCHCR1-209ENST00000455279 WDR62O43379 1518 aa37.51■■■■□ 3.59
CCHCR1-209ENST00000455279 PRDM2Q13029 1718 aa37.33■■■■□ 3.57
CCHCR1-209ENST00000455279 URB2Q14146 1524 aaKnown RBP37.32■■■■□ 3.57
CCHCR1-209ENST00000455279 SUPT5HO00267 1087 aaKnown RBP37.02■■■■□ 3.52
CCHCR1-209ENST00000455279 TOPBP1Q92547 1522 aa36.96■■■■□ 3.51
CCHCR1-209ENST00000455279 DNMBPQ6XZF7 1577 aa36.83■■■■□ 3.49
CCHCR1-209ENST00000455279 ZNF608Q9ULD9 1512 aaPredicted RBP36.81■■■■□ 3.48
CCHCR1-209ENST00000455279 IFT140Q96RY7 1462 aa36.75■■■■□ 3.47
CCHCR1-209ENST00000455279 ABCC8Q09428 1581 aa36.71■■■■□ 3.47
CCHCR1-209ENST00000455279 POLA1P09884 1462 aaPredicted RBP36.62■■■■□ 3.45
CCHCR1-209ENST00000455279 TARBP1Q13395 1621 aaKnown RBP36.6■■■■□ 3.45
CCHCR1-209ENST00000455279 CUX1P39880 1505 aa36.56■■■■□ 3.44
CCHCR1-209ENST00000455279 EIF4G3O43432 1585 aaKnown RBP36.56■■■■□ 3.44
CCHCR1-209ENST00000455279 RAD54L2Q9Y4B4 1467 aa36.56■■■■□ 3.44
CCHCR1-209ENST00000455279 AQRO60306 1485 aaKnown RBP eCLIP36.51■■■■□ 3.442e-10■■■■■ 47.9
CCHCR1-209ENST00000455279 FGD5Q6ZNL6 1462 aa36.48■■■■□ 3.43
CCHCR1-209ENST00000455279 OSCARQ8IYS5 282 aa36.43■■■■□ 3.42
CCHCR1-209ENST00000455279 SOGA1O94964 1423 aa36.42■■■■□ 3.42
CCHCR1-209ENST00000455279 TDRD9Q8NDG6 1382 aaKnown RBP36.35■■■■□ 3.41
CCHCR1-209ENST00000455279 CHD1O14646 1710 aa36.22■■■■□ 3.39
CCHCR1-209ENST00000455279 WDR97A6NE52 1622 aa36.2■■■■□ 3.39
CCHCR1-209ENST00000455279 TRIM41Q8WV44 630 aa36.19■■■■□ 3.38
CCHCR1-209ENST00000455279 SNAPC4Q5SXM2 1469 aa36.12■■■■□ 3.37
CCHCR1-209ENST00000455279 SYNJ1O43426 1573 aa36.11■■■■□ 3.37
CCHCR1-209ENST00000455279 FBLN2P98095 1184 aa36.09■■■■□ 3.37
CCHCR1-209ENST00000455279 WRNQ14191 1432 aaPredicted RBP eCLIP36.06■■■■□ 3.36
CCHCR1-209ENST00000455279 BIVM-ERCC5R4GMW8 1640 aa36.05■■■■□ 3.36
CCHCR1-209ENST00000455279 ABCA10Q8WWZ4 1543 aa36.03■■■■□ 3.36
CCHCR1-209ENST00000455279 RIMBP3CA6NJZ7 1639 aa36.03■■■■□ 3.36
CCHCR1-209ENST00000455279 RIMBP3BA6NNM3 1639 aa36.03■■■■□ 3.36
CCHCR1-209ENST00000455279 TOP2BQ02880 1626 aa36.03■■■■□ 3.36
CCHCR1-209ENST00000455279 RIMBP3Q9UFD9 1639 aa36.03■■■■□ 3.36
CCHCR1-209ENST00000455279 GRIN2BQ13224 1484 aa36.01■■■■□ 3.36
CCHCR1-209ENST00000455279 ABCA5Q8WWZ7 1642 aa35.98■■■■□ 3.35
CCHCR1-209ENST00000455279 PBRM1Q86U86 1689 aa35.98■■■■□ 3.35
CCHCR1-209ENST00000455279 GAPVD1Q14C86 1478 aa35.98■■■■□ 3.35
CCHCR1-209ENST00000455279 ARHGEF11O15085 1522 aa35.94■■■■□ 3.34
CCHCR1-209ENST00000455279 MAGI1Q96QZ7 1491 aaPredicted RBP35.92■■■■□ 3.34
CCHCR1-209ENST00000455279 CHMP7Q8WUX9 453 aaPredicted RBP35.84■■■■□ 3.33
CCHCR1-209ENST00000455279 SYNJ2O15056 1496 aa35.83■■■■□ 3.33
CCHCR1-209ENST00000455279 CLASP1Q7Z460 1538 aa35.78■■■■□ 3.32
CCHCR1-209ENST00000455279 ADAMTS12P58397 1594 aa35.68■■■■□ 3.3
CCHCR1-209ENST00000455279 ARAP1Q96P48 1450 aa35.67■■■■□ 3.3
CCHCR1-209ENST00000455279 CYB5RLQ6IPT4 315 aa35.64■■■■□ 3.3
CCHCR1-209ENST00000455279 GRIN2AQ12879 1464 aa35.59■■■■□ 3.29
CCHCR1-209ENST00000455279 ERICH3Q5RHP9 1530 aa35.54■■■■□ 3.28
CCHCR1-209ENST00000455279 CEP170Q5SW79 1584 aa35.52■■■■□ 3.28
CCHCR1-209ENST00000455279 FHAD1B1AJZ9 1412 aa35.51■■■■□ 3.28
CCHCR1-209ENST00000455279 NUP160Q12769 1436 aa35.46■■■■□ 3.27
CCHCR1-209ENST00000455279 ERCC6L2Q5T890 1561 aa35.41■■■■□ 3.26
CCHCR1-209ENST00000455279 IGF1RP08069 1367 aa35.29■■■■□ 3.24
CCHCR1-209ENST00000455279 KIF27Q86VH2 1401 aa35.28■■■■□ 3.24
CCHCR1-209ENST00000455279 SHROOM2Q13796 1616 aa35.24■■■■□ 3.23
CCHCR1-209ENST00000455279 RUSC2Q8N2Y8 1516 aa35.16■■■■□ 3.22
CCHCR1-209ENST00000455279 CUL7Q14999 1698 aa35.11■■■■□ 3.21
CCHCR1-209ENST00000455279 PRG4Q92954 1404 aaPredicted RBP35.07■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms