RNA–Protein interactions for RNA: ENST00000455214.1

PLXNB3-204, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 489 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-204ENST00000455214 NISCHQ9Y2I1 1504 aa49.85■■■■■ 5.57
PLXNB3-204ENST00000455214 CCDC180Q9P1Z9 1646 aa44.17■■■■■ 4.66
PLXNB3-204ENST00000455214 ABCC9O60706 1549 aa42.36■■■■■ 4.37
PLXNB3-204ENST00000455214 ZCCHC6Q5VYS8 1495 aaKnown RBP41.72■■■■■ 4.27
PLXNB3-204ENST00000455214 DCAF1Q9Y4B6 1507 aa41.34■■■■■ 4.21
PLXNB3-204ENST00000455214 MYO15BQ96JP2 1530 aa41.28■■■■■ 4.2
PLXNB3-204ENST00000455214 NACADO15069 1562 aa41.27■■■■■ 4.2
PLXNB3-204ENST00000455214 RB1CC1Q8TDY2 1594 aa41.14■■■■■ 4.18
PLXNB3-204ENST00000455214 DCAF8L2P0C7V8 631 aa41.05■■■■■ 4.16
PLXNB3-204ENST00000455214 UNC13AQ9UPW8 1703 aa40.39■■■■■ 4.06
PLXNB3-204ENST00000455214 SCRIBQ14160 1630 aa40.24■■■■■ 4.03
PLXNB3-204ENST00000455214 BICRAQ9NZM4 1560 aa39.93■■■■□ 3.98
PLXNB3-204ENST00000455214 SHROOM4Q9ULL8 1493 aa39.6■■■■□ 3.93
PLXNB3-204ENST00000455214 PABPN1Q86U42 306 aaKnown RBP eCLIP39.58■■■■□ 3.93
PLXNB3-204ENST00000455214 EIF4G1Q04637 1599 aaKnown RBP38.78■■■■□ 3.8
PLXNB3-204ENST00000455214 CECR2Q9BXF3 1484 aa38.72■■■■□ 3.79
PLXNB3-204ENST00000455214 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
PLXNB3-204ENST00000455214 SMARCA4P51532 1647 aa38.6■■■■□ 3.77
PLXNB3-204ENST00000455214 CC2D2AQ9P2K1 1620 aa38.45■■■■□ 3.75
PLXNB3-204ENST00000455214 MROH2BQ7Z745 1585 aa38.42■■■■□ 3.74
PLXNB3-204ENST00000455214 PEG3Q9GZU2 1588 aa38.24■■■■□ 3.71
PLXNB3-204ENST00000455214 DNAJC5BQ9UF47 199 aa38.21■■■■□ 3.71
PLXNB3-204ENST00000455214 RSF1Q96T23 1441 aaPredicted RBP38.18■■■■□ 3.7
PLXNB3-204ENST00000455214 SMARCA2P51531 1590 aa38.16■■■■□ 3.7
PLXNB3-204ENST00000455214 ATAD2BQ9ULI0 1458 aa38.15■■■■□ 3.7
PLXNB3-204ENST00000455214 WIZO95785 1651 aa38.08■■■■□ 3.69
PLXNB3-204ENST00000455214 NCAPD3P42695 1498 aa38.02■■■■□ 3.68
PLXNB3-204ENST00000455214 HMGXB3Q12766 1538 aa37.99■■■■□ 3.67
PLXNB3-204ENST00000455214 BAZ1BQ9UIG0 1483 aaKnown RBP37.85■■■■□ 3.65
PLXNB3-204ENST00000455214 TOP2AP11388 1531 aaKnown RBP37.72■■■■□ 3.63
PLXNB3-204ENST00000455214 SUPT5HO00267 1087 aaKnown RBP37.51■■■■□ 3.6
PLXNB3-204ENST00000455214 CCDC88BA6NC98 1476 aa37.19■■■■□ 3.54
PLXNB3-204ENST00000455214 LAMC3Q9Y6N6 1575 aa36.97■■■■□ 3.51
PLXNB3-204ENST00000455214 CADPSQ9ULU8 1353 aa36.9■■■■□ 3.5
PLXNB3-204ENST00000455214 NESP48681 1621 aa36.89■■■■□ 3.5
PLXNB3-204ENST00000455214 PRDM2Q13029 1718 aa36.88■■■■□ 3.49
PLXNB3-204ENST00000455214 CFTRP13569 1480 aa36.88■■■■□ 3.49
PLXNB3-204ENST00000455214 KIF21AQ7Z4S6 1674 aa36.61■■■■□ 3.45
PLXNB3-204ENST00000455214 PDS5BQ9NTI5 1447 aa36.59■■■■□ 3.45
PLXNB3-204ENST00000455214 FANCD2Q9BXW9 1451 aa36.5■■■■□ 3.43
PLXNB3-204ENST00000455214 ERCC6Q03468 1493 aa36.44■■■■□ 3.42
PLXNB3-204ENST00000455214 CEP164Q9UPV0 1460 aa36.42■■■■□ 3.42
PLXNB3-204ENST00000455214 THOC2Q8NI27 1593 aaKnown RBP36.33■■■■□ 3.41
PLXNB3-204ENST00000455214 MRC2Q9UBG0 1479 aa36.24■■■■□ 3.39
PLXNB3-204ENST00000455214 WDR62O43379 1518 aa36.16■■■■□ 3.38
PLXNB3-204ENST00000455214 URB2Q14146 1524 aaKnown RBP36.14■■■■□ 3.38
PLXNB3-204ENST00000455214 DNMBPQ6XZF7 1577 aa36.09■■■■□ 3.37
PLXNB3-204ENST00000455214 ABCC8Q09428 1581 aa36.07■■■■□ 3.37
PLXNB3-204ENST00000455214 TOPBP1Q92547 1522 aa36.03■■■■□ 3.36
PLXNB3-204ENST00000455214 CUX1P39880 1505 aa36.03■■■■□ 3.36
PLXNB3-204ENST00000455214 BIVM-ERCC5R4GMW8 1640 aa35.97■■■■□ 3.35
PLXNB3-204ENST00000455214 WRNQ14191 1432 aaPredicted RBP eCLIP35.97■■■■□ 3.35
PLXNB3-204ENST00000455214 SYNJ1O43426 1573 aa35.94■■■■□ 3.34
PLXNB3-204ENST00000455214 TOP2BQ02880 1626 aa35.92■■■■□ 3.34
PLXNB3-204ENST00000455214 CUX2O14529 1486 aa35.92■■■■□ 3.34
PLXNB3-204ENST00000455214 POLA1P09884 1462 aaPredicted RBP35.77■■■■□ 3.32
PLXNB3-204ENST00000455214 FGD5Q6ZNL6 1462 aa35.77■■■■□ 3.32
PLXNB3-204ENST00000455214 TARBP1Q13395 1621 aaKnown RBP35.65■■■■□ 3.3
PLXNB3-204ENST00000455214 IFT140Q96RY7 1462 aa35.62■■■■□ 3.29
PLXNB3-204ENST00000455214 WDR97A6NE52 1622 aa35.62■■■■□ 3.29
PLXNB3-204ENST00000455214 RAD54L2Q9Y4B4 1467 aa35.55■■■■□ 3.28
PLXNB3-204ENST00000455214 SOGA1O94964 1423 aa35.54■■■■□ 3.28
PLXNB3-204ENST00000455214 ABCA10Q8WWZ4 1543 aa35.48■■■■□ 3.27
PLXNB3-204ENST00000455214 CHIC1Q5VXU3 224 aa35.47■■■■□ 3.27
PLXNB3-204ENST00000455214 TRIM41Q8WV44 630 aa35.41■■■■□ 3.26
PLXNB3-204ENST00000455214 ZNF608Q9ULD9 1512 aaPredicted RBP35.39■■■■□ 3.26
PLXNB3-204ENST00000455214 EIF4G3O43432 1585 aaKnown RBP35.38■■■■□ 3.25
PLXNB3-204ENST00000455214 ABCA5Q8WWZ7 1642 aa35.36■■■■□ 3.25
PLXNB3-204ENST00000455214 PBRM1Q86U86 1689 aa35.24■■■■□ 3.23
PLXNB3-204ENST00000455214 TDRD9Q8NDG6 1382 aaKnown RBP35.23■■■■□ 3.23
PLXNB3-204ENST00000455214 AQRO60306 1485 aaKnown RBP eCLIP35.22■■■■□ 3.23
PLXNB3-204ENST00000455214 GAPVD1Q14C86 1478 aa35.19■■■■□ 3.22
PLXNB3-204ENST00000455214 KIF27Q86VH2 1401 aa35.15■■■■□ 3.22
PLXNB3-204ENST00000455214 GRIN2BQ13224 1484 aa35.1■■■■□ 3.21
PLXNB3-204ENST00000455214 ERICH3Q5RHP9 1530 aa35.08■■■■□ 3.21
PLXNB3-204ENST00000455214 RUSC2Q8N2Y8 1516 aa35.04■■■■□ 3.2
PLXNB3-204ENST00000455214 SNAPC4Q5SXM2 1469 aa34.99■■■■□ 3.19
PLXNB3-204ENST00000455214 MAGI1Q96QZ7 1491 aaPredicted RBP34.98■■■■□ 3.19
PLXNB3-204ENST00000455214 ADAMTS12P58397 1594 aa34.96■■■■□ 3.19
PLXNB3-204ENST00000455214 EEA1Q15075 1411 aa34.96■■■■□ 3.19
PLXNB3-204ENST00000455214 CUL7Q14999 1698 aa34.94■■■■□ 3.18
PLXNB3-204ENST00000455214 IGF1RP08069 1367 aa34.89■■■■□ 3.18
PLXNB3-204ENST00000455214 CHD1O14646 1710 aa34.85■■■■□ 3.17
PLXNB3-204ENST00000455214 FHAD1B1AJZ9 1412 aa34.81■■■■□ 3.16
PLXNB3-204ENST00000455214 SYNJ2O15056 1496 aa34.81■■■■□ 3.16
PLXNB3-204ENST00000455214 CARMIL1Q5VZK9 1371 aa34.71■■■■□ 3.15
PLXNB3-204ENST00000455214 PRXQ9BXM0 1461 aa34.7■■■■□ 3.15
PLXNB3-204ENST00000455214 GRIN2AQ12879 1464 aa34.68■■■■□ 3.14
PLXNB3-204ENST00000455214 CSRNP3Q8WYN3 585 aa34.67■■■■□ 3.14
PLXNB3-204ENST00000455214 KIF21BO75037 1637 aa34.63■■■■□ 3.13
PLXNB3-204ENST00000455214 FAM9AQ8IZU1 332 aaPredicted RBP34.62■■■■□ 3.13
PLXNB3-204ENST00000455214 RAPGEF2Q9Y4G8 1499 aa34.62■■■■□ 3.13
PLXNB3-204ENST00000455214 CHMP7Q8WUX9 453 aaPredicted RBP34.58■■■■□ 3.13
PLXNB3-204ENST00000455214 CEP170Q5SW79 1584 aa34.53■■■■□ 3.12
PLXNB3-204ENST00000455214 FBLN2P98095 1184 aa34.52■■■■□ 3.12
PLXNB3-204ENST00000455214 NUP160Q12769 1436 aa34.52■■■■□ 3.12
PLXNB3-204ENST00000455214 CLASP1Q7Z460 1538 aa34.45■■■■□ 3.1
PLXNB3-204ENST00000455214 CTTNBP2Q8WZ74 1663 aa34.43■■■■□ 3.1
PLXNB3-204ENST00000455214 GOLGA3Q08378 1498 aa34.39■■■■□ 3.1
PLXNB3-204ENST00000455214 OSCARQ8IYS5 282 aa34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms