RNA–Protein interactions for RNA: ENST00000455193.1

LAMB3-205, Transcript of laminin subunit beta 3, humanhuman

TSL 2

Gene LAMB3, Length 710 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB3-205ENST00000455193 NISCHQ9Y2I1 1504 aa36.07■■■■□ 3.36
LAMB3-205ENST00000455193 CCDC180Q9P1Z9 1646 aa32.31■■■□□ 2.76
LAMB3-205ENST00000455193 ABCC9O60706 1549 aa32.3■■■□□ 2.76
LAMB3-205ENST00000455193 RB1CC1Q8TDY2 1594 aa30.71■■■□□ 2.51
LAMB3-205ENST00000455193 NACADO15069 1562 aa30.49■■■□□ 2.47
LAMB3-205ENST00000455193 DCAF8L2P0C7V8 631 aa30.45■■■□□ 2.47
LAMB3-205ENST00000455193 DNAJC5BQ9UF47 199 aa30.14■■■□□ 2.42
LAMB3-205ENST00000455193 UNC13AQ9UPW8 1703 aa30.08■■■□□ 2.41
LAMB3-205ENST00000455193 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.4
LAMB3-205ENST00000455193 MYO15BQ96JP2 1530 aa30.03■■■□□ 2.4
LAMB3-205ENST00000455193 ZCCHC6Q5VYS8 1495 aaKnown RBP29.94■■■□□ 2.38
LAMB3-205ENST00000455193 BICRAQ9NZM4 1560 aa29.85■■■□□ 2.37
LAMB3-205ENST00000455193 DCAF1Q9Y4B6 1507 aa29.71■■■□□ 2.35
LAMB3-205ENST00000455193 SCRIBQ14160 1630 aa29.59■■■□□ 2.33
LAMB3-205ENST00000455193 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
LAMB3-205ENST00000455193 CC2D2AQ9P2K1 1620 aa29.15■■■□□ 2.26
LAMB3-205ENST00000455193 EIF4G1Q04637 1599 aaKnown RBP29.09■■■□□ 2.25
LAMB3-205ENST00000455193 CECR2Q9BXF3 1484 aa29.04■■■□□ 2.24
LAMB3-205ENST00000455193 SMARCA4P51532 1647 aa28.15■■■□□ 2.1
LAMB3-205ENST00000455193 NCAPD3P42695 1498 aa28.12■■■□□ 2.09
LAMB3-205ENST00000455193 ATAD2BQ9ULI0 1458 aa28.11■■■□□ 2.09
LAMB3-205ENST00000455193 SMARCA2P51531 1590 aa28.03■■■□□ 2.08
LAMB3-205ENST00000455193 BAZ1AQ9NRL2 1556 aaPredicted RBP27.99■■■□□ 2.07
LAMB3-205ENST00000455193 HMGXB3Q12766 1538 aa27.97■■■□□ 2.07
LAMB3-205ENST00000455193 BAZ1BQ9UIG0 1483 aaKnown RBP27.88■■■□□ 2.05
LAMB3-205ENST00000455193 ERCC6Q03468 1493 aa27.86■■■□□ 2.05
LAMB3-205ENST00000455193 MROH2BQ7Z745 1585 aa27.85■■■□□ 2.05
LAMB3-205ENST00000455193 PEG3Q9GZU2 1588 aa27.8■■■□□ 2.04
LAMB3-205ENST00000455193 NESP48681 1621 aa27.79■■■□□ 2.04
LAMB3-205ENST00000455193 CUX2O14529 1486 aa27.69■■■□□ 2.02
LAMB3-205ENST00000455193 WIZO95785 1651 aa27.55■■■□□ 2
LAMB3-205ENST00000455193 DNAJC5Q9H3Z4 198 aa27.51■■□□□ 1.99
LAMB3-205ENST00000455193 LAMC3Q9Y6N6 1575 aa27.51■■□□□ 1.99
LAMB3-205ENST00000455193 THOC2Q8NI27 1593 aaKnown RBP27.47■■□□□ 1.99
LAMB3-205ENST00000455193 KIF21AQ7Z4S6 1674 aa27.44■■□□□ 1.98
LAMB3-205ENST00000455193 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.96
LAMB3-205ENST00000455193 CADPSQ9ULU8 1353 aa27.29■■□□□ 1.96
LAMB3-205ENST00000455193 RSF1Q96T23 1441 aaPredicted RBP27.27■■□□□ 1.96
LAMB3-205ENST00000455193 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
LAMB3-205ENST00000455193 MRC2Q9UBG0 1479 aa27.15■■□□□ 1.94
LAMB3-205ENST00000455193 CEP164Q9UPV0 1460 aa27.07■■□□□ 1.92
LAMB3-205ENST00000455193 WDR62O43379 1518 aa27.07■■□□□ 1.92
LAMB3-205ENST00000455193 FANCD2Q9BXW9 1451 aa27.05■■□□□ 1.92
LAMB3-205ENST00000455193 CFTRP13569 1480 aa27.02■■□□□ 1.92
LAMB3-205ENST00000455193 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
LAMB3-205ENST00000455193 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
LAMB3-205ENST00000455193 PRDM2Q13029 1718 aa26.82■■□□□ 1.88
LAMB3-205ENST00000455193 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
LAMB3-205ENST00000455193 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
LAMB3-205ENST00000455193 TRIM41Q8WV44 630 aa26.49■■□□□ 1.83
LAMB3-205ENST00000455193 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
LAMB3-205ENST00000455193 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
LAMB3-205ENST00000455193 OSCARQ8IYS5 282 aa26.41■■□□□ 1.82
LAMB3-205ENST00000455193 EIF4G3O43432 1585 aaKnown RBP26.38■■□□□ 1.81
LAMB3-205ENST00000455193 ABCC8Q09428 1581 aa26.38■■□□□ 1.81
LAMB3-205ENST00000455193 TARBP1Q13395 1621 aaKnown RBP26.31■■□□□ 1.8
LAMB3-205ENST00000455193 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
LAMB3-205ENST00000455193 AQRO60306 1485 aaKnown RBP eCLIP26.26■■□□□ 1.79
LAMB3-205ENST00000455193 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
LAMB3-205ENST00000455193 SUPT5HO00267 1087 aaKnown RBP26.22■■□□□ 1.79
LAMB3-205ENST00000455193 RIMBP3CA6NJZ7 1639 aa26.17■■□□□ 1.78
LAMB3-205ENST00000455193 RIMBP3BA6NNM3 1639 aa26.17■■□□□ 1.78
LAMB3-205ENST00000455193 RIMBP3Q9UFD9 1639 aa26.17■■□□□ 1.78
LAMB3-205ENST00000455193 CHD1O14646 1710 aa26.17■■□□□ 1.78
LAMB3-205ENST00000455193 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
LAMB3-205ENST00000455193 CUX1P39880 1505 aa26.16■■□□□ 1.78
LAMB3-205ENST00000455193 SOGA1O94964 1423 aa26.14■■□□□ 1.77
LAMB3-205ENST00000455193 TDRD9Q8NDG6 1382 aaKnown RBP26.11■■□□□ 1.77
LAMB3-205ENST00000455193 ARHGEF11O15085 1522 aa26.08■■□□□ 1.77
LAMB3-205ENST00000455193 FBLN2P98095 1184 aa26.07■■□□□ 1.76
LAMB3-205ENST00000455193 SNAPC4Q5SXM2 1469 aa26.03■■□□□ 1.76
LAMB3-205ENST00000455193 WDR97A6NE52 1622 aa25.98■■□□□ 1.75
LAMB3-205ENST00000455193 GRIN2BQ13224 1484 aa25.91■■□□□ 1.74
LAMB3-205ENST00000455193 PBRM1Q86U86 1689 aa25.89■■□□□ 1.73
LAMB3-205ENST00000455193 MAGI1Q96QZ7 1491 aaPredicted RBP25.88■■□□□ 1.73
LAMB3-205ENST00000455193 ARAP1Q96P48 1450 aa25.85■■□□□ 1.73
LAMB3-205ENST00000455193 CYB5RLQ6IPT4 315 aa25.85■■□□□ 1.73
LAMB3-205ENST00000455193 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
LAMB3-205ENST00000455193 GAPVD1Q14C86 1478 aa25.84■■□□□ 1.73
LAMB3-205ENST00000455193 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
LAMB3-205ENST00000455193 CLASP1Q7Z460 1538 aa25.82■■□□□ 1.72
LAMB3-205ENST00000455193 ABCA10Q8WWZ4 1543 aa25.82■■□□□ 1.72
LAMB3-205ENST00000455193 SYNJ2O15056 1496 aa25.8■■□□□ 1.72
LAMB3-205ENST00000455193 SYNJ1O43426 1573 aa25.8■■□□□ 1.72
LAMB3-205ENST00000455193 BIVM-ERCC5R4GMW8 1640 aa25.75■■□□□ 1.71
LAMB3-205ENST00000455193 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
LAMB3-205ENST00000455193 WRNQ14191 1432 aaPredicted RBP eCLIP25.72■■□□□ 1.71
LAMB3-205ENST00000455193 ADAMTS12P58397 1594 aa25.64■■□□□ 1.69
LAMB3-205ENST00000455193 GRIN2AQ12879 1464 aa25.59■■□□□ 1.69
LAMB3-205ENST00000455193 TRHP20396 242 aaPredicted RBP25.55■■□□□ 1.68
LAMB3-205ENST00000455193 CEP170Q5SW79 1584 aa25.54■■□□□ 1.68
LAMB3-205ENST00000455193 ERCC6L2Q5T890 1561 aa25.5■■□□□ 1.67
LAMB3-205ENST00000455193 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
LAMB3-205ENST00000455193 ERICH3Q5RHP9 1530 aa25.48■■□□□ 1.67
LAMB3-205ENST00000455193 NUP160Q12769 1436 aa25.47■■□□□ 1.67
LAMB3-205ENST00000455193 SHROOM2Q13796 1616 aa25.37■■□□□ 1.65
LAMB3-205ENST00000455193 RUSC2Q8N2Y8 1516 aa25.28■■□□□ 1.64
LAMB3-205ENST00000455193 PRG4Q92954 1404 aaPredicted RBP25.25■■□□□ 1.63
LAMB3-205ENST00000455193 KIF27Q86VH2 1401 aa25.2■■□□□ 1.63
LAMB3-205ENST00000455193 CUL7Q14999 1698 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms