RNA–Protein interactions for RNA: ENST00000455144.6

XPC-204, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-204ENST00000455144 AEBP2Q6ZN18 517 aaPredicted RBP17.34■□□□□ 0.37
XPC-204ENST00000455144 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
XPC-204ENST00000455144 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
XPC-204ENST00000455144 CCDC180Q9P1Z9 1646 aa15.31■□□□□ 0.04
XPC-204ENST00000455144 ABCC9O60706 1549 aa14.92□□□□□ -0.02
XPC-204ENST00000455144 SENP3Q9H4L4 574 aaPredicted RBP14.89□□□□□ -0.03
XPC-204ENST00000455144 PHF23Q9BUL5 403 aaPredicted RBP14.67□□□□□ -0.06
XPC-204ENST00000455144 RB1CC1Q8TDY2 1594 aa14.43□□□□□ -0.1
XPC-204ENST00000455144 NACADO15069 1562 aa14.39□□□□□ -0.11
XPC-204ENST00000455144 MYO15BQ96JP2 1530 aa14.29□□□□□ -0.12
XPC-204ENST00000455144 DCAF8L2P0C7V8 631 aa14.28□□□□□ -0.12
XPC-204ENST00000455144 DCAF1Q9Y4B6 1507 aa14.18□□□□□ -0.14
XPC-204ENST00000455144 ZCCHC6Q5VYS8 1495 aaKnown RBP14.18□□□□□ -0.14
XPC-204ENST00000455144 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
XPC-204ENST00000455144 SHROOM4Q9ULL8 1493 aa13.89□□□□□ -0.19
XPC-204ENST00000455144 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
XPC-204ENST00000455144 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
XPC-204ENST00000455144 SCRIBQ14160 1630 aa13.84□□□□□ -0.19
XPC-204ENST00000455144 FOXD1Q16676 465 aa13.8□□□□□ -0.2
XPC-204ENST00000455144 DNAJC5BQ9UF47 199 aa13.67□□□□□ -0.22
XPC-204ENST00000455144 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
XPC-204ENST00000455144 EIF4G1Q04637 1599 aaKnown RBP13.57□□□□□ -0.24
XPC-204ENST00000455144 CC2D2AQ9P2K1 1620 aa13.53□□□□□ -0.24
XPC-204ENST00000455144 CECR2Q9BXF3 1484 aa13.45□□□□□ -0.26
XPC-204ENST00000455144 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
XPC-204ENST00000455144 SMARCA4P51532 1647 aa13.27□□□□□ -0.29
XPC-204ENST00000455144 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
XPC-204ENST00000455144 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
XPC-204ENST00000455144 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
XPC-204ENST00000455144 HMGXB3Q12766 1538 aa13.18□□□□□ -0.3
XPC-204ENST00000455144 PEG3Q9GZU2 1588 aa13.16□□□□□ -0.3
XPC-204ENST00000455144 BAZ1BQ9UIG0 1483 aaKnown RBP13.12□□□□□ -0.31
XPC-204ENST00000455144 MROH2BQ7Z745 1585 aa13.09□□□□□ -0.31
XPC-204ENST00000455144 MSH5O43196 834 aa12.99□□□□□ -0.33
XPC-204ENST00000455144 WIZO95785 1651 aa12.97□□□□□ -0.33
XPC-204ENST00000455144 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
XPC-204ENST00000455144 LAMC3Q9Y6N6 1575 aa12.95□□□□□ -0.34
XPC-204ENST00000455144 ERCC6Q03468 1493 aa12.94□□□□□ -0.34
XPC-204ENST00000455144 RSF1Q96T23 1441 aaPredicted RBP12.92□□□□□ -0.34
XPC-204ENST00000455144 ADRA2BP18089 450 aa12.91□□□□□ -0.34
XPC-204ENST00000455144 PPP6R1Q9UPN7 881 aa12.91□□□□□ -0.34
XPC-204ENST00000455144 TOP2AP11388 1531 aaKnown RBP12.88□□□□□ -0.35
XPC-204ENST00000455144 CUX2O14529 1486 aa12.86□□□□□ -0.35
XPC-204ENST00000455144 PDS5BQ9NTI5 1447 aa12.86□□□□□ -0.35
XPC-204ENST00000455144 NESP48681 1621 aa12.84□□□□□ -0.35
XPC-204ENST00000455144 CADPSQ9ULU8 1353 aa12.83□□□□□ -0.36
XPC-204ENST00000455144 KIF21AQ7Z4S6 1674 aa12.78□□□□□ -0.36
XPC-204ENST00000455144 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
XPC-204ENST00000455144 THOC2Q8NI27 1593 aaKnown RBP12.73□□□□□ -0.37
XPC-204ENST00000455144 CFTRP13569 1480 aa12.73□□□□□ -0.37
XPC-204ENST00000455144 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
XPC-204ENST00000455144 MRC2Q9UBG0 1479 aa12.69□□□□□ -0.38
XPC-204ENST00000455144 FANCD2Q9BXW9 1451 aa12.68□□□□□ -0.38
XPC-204ENST00000455144 CCDC88BA6NC98 1476 aa12.67□□□□□ -0.38
XPC-204ENST00000455144 WDR62O43379 1518 aa12.63□□□□□ -0.39
XPC-204ENST00000455144 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
XPC-204ENST00000455144 SUPT5HO00267 1087 aaKnown RBP12.53□□□□□ -0.4
XPC-204ENST00000455144 DNAJC5Q9H3Z4 198 aa12.52□□□□□ -0.41
XPC-204ENST00000455144 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.41
XPC-204ENST00000455144 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
XPC-204ENST00000455144 DNMBPQ6XZF7 1577 aa12.47□□□□□ -0.41
XPC-204ENST00000455144 TOPBP1Q92547 1522 aa12.46□□□□□ -0.42
XPC-204ENST00000455144 IFT140Q96RY7 1462 aa12.45□□□□□ -0.42
XPC-204ENST00000455144 WDR97A6NE52 1622 aa12.35□□□□□ -0.43
XPC-204ENST00000455144 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
XPC-204ENST00000455144 TARBP1Q13395 1621 aaKnown RBP12.33□□□□□ -0.43
XPC-204ENST00000455144 SOGA1O94964 1423 aa12.31□□□□□ -0.44
XPC-204ENST00000455144 OSCARQ8IYS5 282 aa12.31□□□□□ -0.44
XPC-204ENST00000455144 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
XPC-204ENST00000455144 FGD5Q6ZNL6 1462 aa12.29□□□□□ -0.44
XPC-204ENST00000455144 CUX1P39880 1505 aa12.29□□□□□ -0.44
XPC-204ENST00000455144 ZNF608Q9ULD9 1512 aaPredicted RBP12.29□□□□□ -0.44
XPC-204ENST00000455144 BIVM-ERCC5R4GMW8 1640 aa12.25□□□□□ -0.45
XPC-204ENST00000455144 WRNQ14191 1432 aaPredicted RBP eCLIP12.24□□□□□ -0.45
XPC-204ENST00000455144 RAD54L2Q9Y4B4 1467 aa12.24□□□□□ -0.45
XPC-204ENST00000455144 TOP2BQ02880 1626 aa12.23□□□□□ -0.45
XPC-204ENST00000455144 AQRO60306 1485 aaKnown RBP eCLIP12.23□□□□□ -0.451e-7■■■■■ 38.1
XPC-204ENST00000455144 GRIN2BQ13224 1484 aa12.21□□□□□ -0.46
XPC-204ENST00000455144 CHD1O14646 1710 aa12.2□□□□□ -0.46
XPC-204ENST00000455144 TDRD9Q8NDG6 1382 aaKnown RBP12.2□□□□□ -0.46
XPC-204ENST00000455144 ABCA10Q8WWZ4 1543 aa12.2□□□□□ -0.46
XPC-204ENST00000455144 MAGI1Q96QZ7 1491 aaPredicted RBP12.2□□□□□ -0.46
XPC-204ENST00000455144 PBRM1Q86U86 1689 aa12.19□□□□□ -0.46
XPC-204ENST00000455144 GAPVD1Q14C86 1478 aa12.18□□□□□ -0.46
XPC-204ENST00000455144 FBLN2P98095 1184 aa12.16□□□□□ -0.46
XPC-204ENST00000455144 SYNJ1O43426 1573 aa12.16□□□□□ -0.46
XPC-204ENST00000455144 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
XPC-204ENST00000455144 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.47
XPC-204ENST00000455144 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
XPC-204ENST00000455144 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
XPC-204ENST00000455144 KCNA4P22459 653 aa12.11□□□□□ -0.47
XPC-204ENST00000455144 ERICH3Q5RHP9 1530 aa12.09□□□□□ -0.47
XPC-204ENST00000455144 RIMBP3CA6NJZ7 1639 aa12.08□□□□□ -0.48
XPC-204ENST00000455144 RIMBP3BA6NNM3 1639 aa12.08□□□□□ -0.48
XPC-204ENST00000455144 RIMBP3Q9UFD9 1639 aa12.08□□□□□ -0.48
XPC-204ENST00000455144 FHAD1B1AJZ9 1412 aa12.05□□□□□ -0.48
XPC-204ENST00000455144 ARHGEF11O15085 1522 aa12.05□□□□□ -0.48
XPC-204ENST00000455144 ADAMTS12P58397 1594 aa12.04□□□□□ -0.48
XPC-204ENST00000455144 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
XPC-204ENST00000455144 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms