RNA–Protein interactions for RNA: ENST00000455133.1

HFM1-205, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 4

Gene HFM1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-205ENST00000455133 NISCHQ9Y2I1 1504 aa41.09■■■■■ 4.17
HFM1-205ENST00000455133 CCDC180Q9P1Z9 1646 aa36.59■■■■□ 3.45
HFM1-205ENST00000455133 ABCC9O60706 1549 aa36.09■■■■□ 3.37
HFM1-205ENST00000455133 RB1CC1Q8TDY2 1594 aa34.57■■■■□ 3.12
HFM1-205ENST00000455133 NACADO15069 1562 aa34.48■■■■□ 3.11
HFM1-205ENST00000455133 DCAF8L2P0C7V8 631 aa34.45■■■■□ 3.11
HFM1-205ENST00000455133 MYO15BQ96JP2 1530 aa34.2■■■■□ 3.06
HFM1-205ENST00000455133 ZCCHC6Q5VYS8 1495 aaKnown RBP34.18■■■■□ 3.06
HFM1-205ENST00000455133 DCAF1Q9Y4B6 1507 aa33.97■■■■□ 3.03
HFM1-205ENST00000455133 UNC13AQ9UPW8 1703 aa33.76■■■■□ 3
HFM1-205ENST00000455133 PABPN1Q86U42 306 aaKnown RBP eCLIP33.71■■■□□ 2.99
HFM1-205ENST00000455133 BICRAQ9NZM4 1560 aa33.58■■■□□ 2.97
HFM1-205ENST00000455133 SCRIBQ14160 1630 aa33.4■■■□□ 2.94
HFM1-205ENST00000455133 DNAJC5BQ9UF47 199 aa33.4■■■□□ 2.94
HFM1-205ENST00000455133 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
HFM1-205ENST00000455133 EIF4G1Q04637 1599 aaKnown RBP32.69■■■□□ 2.82
HFM1-205ENST00000455133 CC2D2AQ9P2K1 1620 aa32.62■■■□□ 2.81
HFM1-205ENST00000455133 CECR2Q9BXF3 1484 aa32.44■■■□□ 2.78
HFM1-205ENST00000455133 SMARCA4P51532 1647 aa31.92■■■□□ 2.7
HFM1-205ENST00000455133 NCAPD3P42695 1498 aa31.84■■■□□ 2.69
HFM1-205ENST00000455133 BAZ1AQ9NRL2 1556 aaPredicted RBP31.84■■■□□ 2.69
HFM1-205ENST00000455133 ATAD2BQ9ULI0 1458 aa31.83■■■□□ 2.69
HFM1-205ENST00000455133 SMARCA2P51531 1590 aa31.75■■■□□ 2.67
HFM1-205ENST00000455133 MROH2BQ7Z745 1585 aa31.68■■■□□ 2.66
HFM1-205ENST00000455133 HMGXB3Q12766 1538 aa31.64■■■□□ 2.66
HFM1-205ENST00000455133 PEG3Q9GZU2 1588 aa31.61■■■□□ 2.65
HFM1-205ENST00000455133 BAZ1BQ9UIG0 1483 aaKnown RBP31.53■■■□□ 2.64
HFM1-205ENST00000455133 WIZO95785 1651 aa31.31■■■□□ 2.6
HFM1-205ENST00000455133 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
HFM1-205ENST00000455133 NESP48681 1621 aa31.16■■■□□ 2.58
HFM1-205ENST00000455133 ERCC6Q03468 1493 aa31.1■■■□□ 2.57
HFM1-205ENST00000455133 LAMC3Q9Y6N6 1575 aa31.01■■■□□ 2.56
HFM1-205ENST00000455133 TOP2AP11388 1531 aaKnown RBP30.95■■■□□ 2.55
HFM1-205ENST00000455133 CADPSQ9ULU8 1353 aa30.91■■■□□ 2.54
HFM1-205ENST00000455133 CUX2O14529 1486 aa30.85■■■□□ 2.53
HFM1-205ENST00000455133 PDS5BQ9NTI5 1447 aa30.83■■■□□ 2.53
HFM1-205ENST00000455133 KIF21AQ7Z4S6 1674 aa30.74■■■□□ 2.51
HFM1-205ENST00000455133 THOC2Q8NI27 1593 aaKnown RBP30.72■■■□□ 2.51
HFM1-205ENST00000455133 CFTRP13569 1480 aa30.67■■■□□ 2.5
HFM1-205ENST00000455133 CCDC88BA6NC98 1476 aa30.62■■■□□ 2.49
HFM1-205ENST00000455133 FANCD2Q9BXW9 1451 aa30.55■■■□□ 2.48
HFM1-205ENST00000455133 MRC2Q9UBG0 1479 aa30.53■■■□□ 2.48
HFM1-205ENST00000455133 CEP164Q9UPV0 1460 aa30.52■■■□□ 2.48
HFM1-205ENST00000455133 WDR62O43379 1518 aa30.43■■■□□ 2.46
HFM1-205ENST00000455133 PRDM2Q13029 1718 aa30.34■■■□□ 2.45
HFM1-205ENST00000455133 SUPT5HO00267 1087 aaKnown RBP30.27■■■□□ 2.44
HFM1-205ENST00000455133 URB2Q14146 1524 aaKnown RBP30.27■■■□□ 2.44
HFM1-205ENST00000455133 DNAJC5Q9H3Z4 198 aa30.23■■■□□ 2.43
HFM1-205ENST00000455133 TOPBP1Q92547 1522 aa30.03■■■□□ 2.4
HFM1-205ENST00000455133 ABCC8Q09428 1581 aa29.99■■■□□ 2.39
HFM1-205ENST00000455133 DNMBPQ6XZF7 1577 aa29.96■■■□□ 2.39
HFM1-205ENST00000455133 IFT140Q96RY7 1462 aa29.89■■■□□ 2.38
HFM1-205ENST00000455133 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
HFM1-205ENST00000455133 POLA1P09884 1462 aaPredicted RBP29.76■■■□□ 2.35
HFM1-205ENST00000455133 CUX1P39880 1505 aa29.73■■■□□ 2.35
HFM1-205ENST00000455133 TARBP1Q13395 1621 aaKnown RBP29.72■■■□□ 2.35
HFM1-205ENST00000455133 FGD5Q6ZNL6 1462 aa29.66■■■□□ 2.34
HFM1-205ENST00000455133 RAD54L2Q9Y4B4 1467 aa29.66■■■□□ 2.34
HFM1-205ENST00000455133 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.34
HFM1-205ENST00000455133 SOGA1O94964 1423 aa29.64■■■□□ 2.34
HFM1-205ENST00000455133 AQRO60306 1485 aaKnown RBP eCLIP29.61■■■□□ 2.33
HFM1-205ENST00000455133 OSCARQ8IYS5 282 aa29.55■■■□□ 2.32
HFM1-205ENST00000455133 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
HFM1-205ENST00000455133 WRNQ14191 1432 aaPredicted RBP eCLIP29.44■■■□□ 2.3
HFM1-205ENST00000455133 WDR97A6NE52 1622 aa29.43■■■□□ 2.3
HFM1-205ENST00000455133 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
HFM1-205ENST00000455133 SYNJ1O43426 1573 aa29.38■■■□□ 2.29
HFM1-205ENST00000455133 BIVM-ERCC5R4GMW8 1640 aa29.38■■■□□ 2.29
HFM1-205ENST00000455133 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
HFM1-205ENST00000455133 AEBP2Q6ZN18 517 aaPredicted RBP29.34■■■□□ 2.29
HFM1-205ENST00000455133 GRIN2BQ13224 1484 aa29.31■■■□□ 2.28
HFM1-205ENST00000455133 SNAPC4Q5SXM2 1469 aa29.31■■■□□ 2.28
HFM1-205ENST00000455133 CHD1O14646 1710 aa29.3■■■□□ 2.28
HFM1-205ENST00000455133 FBLN2P98095 1184 aa29.29■■■□□ 2.28
HFM1-205ENST00000455133 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
HFM1-205ENST00000455133 MAGI1Q96QZ7 1491 aaPredicted RBP29.25■■■□□ 2.27
HFM1-205ENST00000455133 ABCA5Q8WWZ7 1642 aa29.24■■■□□ 2.27
HFM1-205ENST00000455133 PBRM1Q86U86 1689 aa29.2■■■□□ 2.26
HFM1-205ENST00000455133 CHMP7Q8WUX9 453 aaPredicted RBP29.17■■■□□ 2.26
HFM1-205ENST00000455133 SYNJ2O15056 1496 aa29.15■■■□□ 2.26
HFM1-205ENST00000455133 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
HFM1-205ENST00000455133 RIMBP3CA6NJZ7 1639 aa29.09■■■□□ 2.25
HFM1-205ENST00000455133 RIMBP3BA6NNM3 1639 aa29.09■■■□□ 2.25
HFM1-205ENST00000455133 RIMBP3Q9UFD9 1639 aa29.09■■■□□ 2.25
HFM1-205ENST00000455133 ARHGEF11O15085 1522 aa29.07■■■□□ 2.24
HFM1-205ENST00000455133 CLASP1Q7Z460 1538 aa29.01■■■□□ 2.23
HFM1-205ENST00000455133 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
HFM1-205ENST00000455133 ADAMTS12P58397 1594 aa28.98■■■□□ 2.23
HFM1-205ENST00000455133 GRIN2AQ12879 1464 aa28.94■■■□□ 2.22
HFM1-205ENST00000455133 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
HFM1-205ENST00000455133 CYB5RLQ6IPT4 315 aa28.84■■■□□ 2.21
HFM1-205ENST00000455133 KIF27Q86VH2 1401 aa28.84■■■□□ 2.21
HFM1-205ENST00000455133 ARAP1Q96P48 1450 aa28.84■■■□□ 2.21
HFM1-205ENST00000455133 NUP160Q12769 1436 aa28.83■■■□□ 2.21
HFM1-205ENST00000455133 CEP170Q5SW79 1584 aa28.81■■■□□ 2.2
HFM1-205ENST00000455133 IGF1RP08069 1367 aa28.78■■■□□ 2.2
HFM1-205ENST00000455133 CUL7Q14999 1698 aa28.65■■■□□ 2.18
HFM1-205ENST00000455133 ERCC6L2Q5T890 1561 aa28.62■■■□□ 2.17
HFM1-205ENST00000455133 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
HFM1-205ENST00000455133 CARMIL1Q5VZK9 1371 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms