RNA–Protein interactions for RNA: ENST00000455099.6

PAX6-212, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-212ENST00000455099 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
PAX6-212ENST00000455099 CCDC180Q9P1Z9 1646 aa38.73■■■■□ 3.79
PAX6-212ENST00000455099 ABCC9O60706 1549 aa38.23■■■■□ 3.71
PAX6-212ENST00000455099 RB1CC1Q8TDY2 1594 aa36.56■■■■□ 3.44
PAX6-212ENST00000455099 NACADO15069 1562 aa36.44■■■■□ 3.42
PAX6-212ENST00000455099 DCAF8L2P0C7V8 631 aa36.39■■■■□ 3.42
PAX6-212ENST00000455099 ZCCHC6Q5VYS8 1495 aaKnown RBP36.2■■■■□ 3.39
PAX6-212ENST00000455099 MYO15BQ96JP2 1530 aa36.1■■■■□ 3.37
PAX6-212ENST00000455099 DCAF1Q9Y4B6 1507 aa35.88■■■■□ 3.33
PAX6-212ENST00000455099 UNC13AQ9UPW8 1703 aa35.85■■■■□ 3.33
PAX6-212ENST00000455099 PABPN1Q86U42 306 aaKnown RBP eCLIP35.68■■■■□ 3.3
PAX6-212ENST00000455099 BICRAQ9NZM4 1560 aa35.59■■■■□ 3.29
PAX6-212ENST00000455099 SCRIBQ14160 1630 aa35.44■■■■□ 3.26
PAX6-212ENST00000455099 DNAJC5BQ9UF47 199 aa35.35■■■■□ 3.25
PAX6-212ENST00000455099 SHROOM4Q9ULL8 1493 aa35■■■■□ 3.19
PAX6-212ENST00000455099 EIF4G1Q04637 1599 aaKnown RBP34.62■■■■□ 3.13
PAX6-212ENST00000455099 CC2D2AQ9P2K1 1620 aa34.55■■■■□ 3.12
PAX6-212ENST00000455099 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
PAX6-212ENST00000455099 SMARCA4P51532 1647 aa33.82■■■■□ 3
PAX6-212ENST00000455099 ATAD2BQ9ULI0 1458 aa33.68■■■□□ 2.98
PAX6-212ENST00000455099 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
PAX6-212ENST00000455099 NCAPD3P42695 1498 aa33.64■■■□□ 2.98
PAX6-212ENST00000455099 MROH2BQ7Z745 1585 aa33.57■■■□□ 2.96
PAX6-212ENST00000455099 SMARCA2P51531 1590 aa33.56■■■□□ 2.96
PAX6-212ENST00000455099 HMGXB3Q12766 1538 aa33.48■■■□□ 2.95
PAX6-212ENST00000455099 PEG3Q9GZU2 1588 aa33.44■■■□□ 2.94
PAX6-212ENST00000455099 BAZ1BQ9UIG0 1483 aaKnown RBP33.37■■■□□ 2.93
PAX6-212ENST00000455099 WIZO95785 1651 aa33.2■■■□□ 2.91
PAX6-212ENST00000455099 NESP48681 1621 aa33.06■■■□□ 2.88
PAX6-212ENST00000455099 RSF1Q96T23 1441 aaPredicted RBP33.05■■■□□ 2.88
PAX6-212ENST00000455099 ERCC6Q03468 1493 aa32.9■■■□□ 2.86
PAX6-212ENST00000455099 LAMC3Q9Y6N6 1575 aa32.79■■■□□ 2.84
PAX6-212ENST00000455099 TOP2AP11388 1531 aaKnown RBP32.77■■■□□ 2.84
PAX6-212ENST00000455099 CADPSQ9ULU8 1353 aa32.65■■■□□ 2.82
PAX6-212ENST00000455099 KIF21AQ7Z4S6 1674 aa32.63■■■□□ 2.81
PAX6-212ENST00000455099 CUX2O14529 1486 aa32.6■■■□□ 2.81
PAX6-212ENST00000455099 THOC2Q8NI27 1593 aaKnown RBP32.58■■■□□ 2.81
PAX6-212ENST00000455099 PDS5BQ9NTI5 1447 aa32.54■■■□□ 2.8
PAX6-212ENST00000455099 CFTRP13569 1480 aa32.43■■■□□ 2.78
PAX6-212ENST00000455099 CCDC88BA6NC98 1476 aa32.4■■■□□ 2.78
PAX6-212ENST00000455099 FANCD2Q9BXW9 1451 aa32.33■■■□□ 2.77
PAX6-212ENST00000455099 MRC2Q9UBG0 1479 aa32.3■■■□□ 2.76
PAX6-212ENST00000455099 CEP164Q9UPV0 1460 aa32.29■■■□□ 2.76
PAX6-212ENST00000455099 WDR62O43379 1518 aa32.23■■■□□ 2.75
PAX6-212ENST00000455099 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
PAX6-212ENST00000455099 URB2Q14146 1524 aaKnown RBP32.07■■■□□ 2.72
PAX6-212ENST00000455099 SUPT5HO00267 1087 aaKnown RBP32.01■■■□□ 2.71
PAX6-212ENST00000455099 DNAJC5Q9H3Z4 198 aa31.88■■■□□ 2.69
PAX6-212ENST00000455099 TOPBP1Q92547 1522 aa31.8■■■□□ 2.68
PAX6-212ENST00000455099 DNMBPQ6XZF7 1577 aa31.72■■■□□ 2.67
PAX6-212ENST00000455099 ABCC8Q09428 1581 aa31.62■■■□□ 2.65
PAX6-212ENST00000455099 ZNF608Q9ULD9 1512 aaPredicted RBP31.59■■■□□ 2.65
PAX6-212ENST00000455099 IFT140Q96RY7 1462 aa31.59■■■□□ 2.65
PAX6-212ENST00000455099 POLA1P09884 1462 aaPredicted RBP31.52■■■□□ 2.64
PAX6-212ENST00000455099 CUX1P39880 1505 aa31.51■■■□□ 2.63
PAX6-212ENST00000455099 TARBP1Q13395 1621 aaKnown RBP31.49■■■□□ 2.63
PAX6-212ENST00000455099 EIF4G3O43432 1585 aaKnown RBP31.44■■■□□ 2.62
PAX6-212ENST00000455099 RAD54L2Q9Y4B4 1467 aa31.42■■■□□ 2.62
PAX6-212ENST00000455099 FGD5Q6ZNL6 1462 aa31.41■■■□□ 2.62
PAX6-212ENST00000455099 AQRO60306 1485 aaKnown RBP eCLIP31.34■■■□□ 2.61
PAX6-212ENST00000455099 SOGA1O94964 1423 aa31.32■■■□□ 2.6
PAX6-212ENST00000455099 TDRD9Q8NDG6 1382 aaKnown RBP31.23■■■□□ 2.59
PAX6-212ENST00000455099 WDR97A6NE52 1622 aa31.2■■■□□ 2.58
PAX6-212ENST00000455099 SYNJ1O43426 1573 aa31.17■■■□□ 2.58
PAX6-212ENST00000455099 OSCARQ8IYS5 282 aa31.15■■■□□ 2.58
PAX6-212ENST00000455099 WRNQ14191 1432 aaPredicted RBP eCLIP31.14■■■□□ 2.58
PAX6-212ENST00000455099 BIVM-ERCC5R4GMW8 1640 aa31.12■■■□□ 2.57
PAX6-212ENST00000455099 TOP2BQ02880 1626 aa31.11■■■□□ 2.57
PAX6-212ENST00000455099 CHD1O14646 1710 aa31.09■■■□□ 2.57
PAX6-212ENST00000455099 SNAPC4Q5SXM2 1469 aa31.06■■■□□ 2.56
PAX6-212ENST00000455099 ABCA10Q8WWZ4 1543 aa31.05■■■□□ 2.56
PAX6-212ENST00000455099 ABCA5Q8WWZ7 1642 aa31■■■□□ 2.55
PAX6-212ENST00000455099 GRIN2BQ13224 1484 aa30.98■■■□□ 2.55
PAX6-212ENST00000455099 PBRM1Q86U86 1689 aa30.97■■■□□ 2.55
PAX6-212ENST00000455099 GAPVD1Q14C86 1478 aa30.97■■■□□ 2.55
PAX6-212ENST00000455099 FBLN2P98095 1184 aa30.95■■■□□ 2.55
PAX6-212ENST00000455099 MAGI1Q96QZ7 1491 aaPredicted RBP30.92■■■□□ 2.54
PAX6-212ENST00000455099 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
PAX6-212ENST00000455099 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
PAX6-212ENST00000455099 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
PAX6-212ENST00000455099 SYNJ2O15056 1496 aa30.82■■■□□ 2.53
PAX6-212ENST00000455099 TRIM41Q8WV44 630 aa30.81■■■□□ 2.52
PAX6-212ENST00000455099 ARHGEF11O15085 1522 aa30.78■■■□□ 2.52
PAX6-212ENST00000455099 CHMP7Q8WUX9 453 aaPredicted RBP30.77■■■□□ 2.52
PAX6-212ENST00000455099 ADAMTS12P58397 1594 aa30.74■■■□□ 2.51
PAX6-212ENST00000455099 CLASP1Q7Z460 1538 aa30.73■■■□□ 2.51
PAX6-212ENST00000455099 ERICH3Q5RHP9 1530 aa30.64■■■□□ 2.5
PAX6-212ENST00000455099 GRIN2AQ12879 1464 aa30.63■■■□□ 2.49
PAX6-212ENST00000455099 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
PAX6-212ENST00000455099 ARAP1Q96P48 1450 aa30.56■■■□□ 2.48
PAX6-212ENST00000455099 CEP170Q5SW79 1584 aa30.54■■■□□ 2.48
PAX6-212ENST00000455099 NUP160Q12769 1436 aa30.5■■■□□ 2.47
PAX6-212ENST00000455099 KIF27Q86VH2 1401 aa30.46■■■□□ 2.47
PAX6-212ENST00000455099 CYB5RLQ6IPT4 315 aa30.45■■■□□ 2.47
PAX6-212ENST00000455099 IGF1RP08069 1367 aa30.41■■■□□ 2.46
PAX6-212ENST00000455099 ERCC6L2Q5T890 1561 aa30.38■■■□□ 2.45
PAX6-212ENST00000455099 CUL7Q14999 1698 aa30.33■■■□□ 2.45
PAX6-212ENST00000455099 SHROOM2Q13796 1616 aa30.31■■■□□ 2.44
PAX6-212ENST00000455099 RUSC2Q8N2Y8 1516 aa30.3■■■□□ 2.44
PAX6-212ENST00000455099 CARMIL1Q5VZK9 1371 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms