RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 NISCHQ9Y2I1 1504 aa50.33■■■■■ 5.65
TNRC18-208ENST00000455076 CCDC180Q9P1Z9 1646 aa44.95■■■■■ 4.79
TNRC18-208ENST00000455076 ABCC9O60706 1549 aa44.03■■■■■ 4.64
TNRC18-208ENST00000455076 RB1CC1Q8TDY2 1594 aa42.36■■■■■ 4.37
TNRC18-208ENST00000455076 NACADO15069 1562 aa42.28■■■■■ 4.36
TNRC18-208ENST00000455076 MYO15BQ96JP2 1530 aa42.05■■■■■ 4.32
TNRC18-208ENST00000455076 ZCCHC6Q5VYS8 1495 aaKnown RBP41.92■■■■■ 4.3
TNRC18-208ENST00000455076 DCAF8L2P0C7V8 631 aa41.81■■■■■ 4.28
TNRC18-208ENST00000455076 DCAF1Q9Y4B6 1507 aa41.74■■■■■ 4.27
TNRC18-208ENST00000455076 UNC13AQ9UPW8 1703 aa41.41■■■■■ 4.22
TNRC18-208ENST00000455076 BICRAQ9NZM4 1560 aa41.12■■■■■ 4.17
TNRC18-208ENST00000455076 PABPN1Q86U42 306 aaKnown RBP eCLIP41.01■■■■■ 4.16
TNRC18-208ENST00000455076 SCRIBQ14160 1630 aa40.82■■■■■ 4.13
TNRC18-208ENST00000455076 SHROOM4Q9ULL8 1493 aa40.79■■■■■ 4.12
TNRC18-208ENST00000455076 DNAJC5BQ9UF47 199 aa40.63■■■■■ 4.09
TNRC18-208ENST00000455076 EIF4G1Q04637 1599 aaKnown RBP40.03■■■■■ 4
TNRC18-208ENST00000455076 CC2D2AQ9P2K1 1620 aa39.9■■■■□ 3.98
TNRC18-208ENST00000455076 CECR2Q9BXF3 1484 aa39.65■■■■□ 3.94
TNRC18-208ENST00000455076 SMARCA4P51532 1647 aa39.11■■■■□ 3.85
TNRC18-208ENST00000455076 BAZ1AQ9NRL2 1556 aaPredicted RBP39.04■■■■□ 3.84
TNRC18-208ENST00000455076 NCAPD3P42695 1498 aa39.01■■■■□ 3.84
TNRC18-208ENST00000455076 ATAD2BQ9ULI0 1458 aa38.96■■■■□ 3.83
TNRC18-208ENST00000455076 SMARCA2P51531 1590 aa38.92■■■■□ 3.82
TNRC18-208ENST00000455076 PEG3Q9GZU2 1588 aa38.84■■■■□ 3.81
TNRC18-208ENST00000455076 HMGXB3Q12766 1538 aa38.84■■■■□ 3.81
TNRC18-208ENST00000455076 MROH2BQ7Z745 1585 aa38.74■■■■□ 3.79
TNRC18-208ENST00000455076 BAZ1BQ9UIG0 1483 aaKnown RBP38.59■■■■□ 3.77
TNRC18-208ENST00000455076 WIZO95785 1651 aa38.29■■■■□ 3.72
TNRC18-208ENST00000455076 RSF1Q96T23 1441 aaPredicted RBP38.21■■■■□ 3.71
TNRC18-208ENST00000455076 NESP48681 1621 aa38.05■■■■□ 3.68
TNRC18-208ENST00000455076 LAMC3Q9Y6N6 1575 aa38.03■■■■□ 3.68
TNRC18-208ENST00000455076 ERCC6Q03468 1493 aa37.97■■■■□ 3.67
TNRC18-208ENST00000455076 TOP2AP11388 1531 aaKnown RBP37.94■■■■□ 3.66
TNRC18-208ENST00000455076 CUX2O14529 1486 aa37.81■■■■□ 3.64
TNRC18-208ENST00000455076 CADPSQ9ULU8 1353 aa37.8■■■■□ 3.64
TNRC18-208ENST00000455076 PDS5BQ9NTI5 1447 aa37.72■■■■□ 3.63
TNRC18-208ENST00000455076 THOC2Q8NI27 1593 aaKnown RBP37.65■■■■□ 3.62
TNRC18-208ENST00000455076 KIF21AQ7Z4S6 1674 aa37.64■■■■□ 3.62
TNRC18-208ENST00000455076 CFTRP13569 1480 aa37.58■■■■□ 3.61
TNRC18-208ENST00000455076 CCDC88BA6NC98 1476 aa37.42■■■■□ 3.58
TNRC18-208ENST00000455076 MRC2Q9UBG0 1479 aa37.37■■■■□ 3.57
TNRC18-208ENST00000455076 FANCD2Q9BXW9 1451 aa37.36■■■■□ 3.57
TNRC18-208ENST00000455076 CEP164Q9UPV0 1460 aa37.35■■■■□ 3.57
TNRC18-208ENST00000455076 WDR62O43379 1518 aa37.31■■■■□ 3.56
TNRC18-208ENST00000455076 PRDM2Q13029 1718 aa37.3■■■■□ 3.56
TNRC18-208ENST00000455076 URB2Q14146 1524 aaKnown RBP37.02■■■■□ 3.52
TNRC18-208ENST00000455076 DNAJC5Q9H3Z4 198 aa36.85■■■■□ 3.49
TNRC18-208ENST00000455076 SUPT5HO00267 1087 aaKnown RBP36.79■■■■□ 3.48
TNRC18-208ENST00000455076 ABCC8Q09428 1581 aa36.77■■■■□ 3.48
TNRC18-208ENST00000455076 TOPBP1Q92547 1522 aa36.75■■■■□ 3.47
TNRC18-208ENST00000455076 DNMBPQ6XZF7 1577 aa36.71■■■■□ 3.47
TNRC18-208ENST00000455076 IFT140Q96RY7 1462 aa36.61■■■■□ 3.45
TNRC18-208ENST00000455076 POLA1P09884 1462 aaPredicted RBP36.43■■■■□ 3.42
TNRC18-208ENST00000455076 TARBP1Q13395 1621 aaKnown RBP36.41■■■■□ 3.42
TNRC18-208ENST00000455076 ZNF608Q9ULD9 1512 aaPredicted RBP36.4■■■■□ 3.42
TNRC18-208ENST00000455076 CUX1P39880 1505 aa36.37■■■■□ 3.41
TNRC18-208ENST00000455076 EIF4G3O43432 1585 aaKnown RBP36.31■■■■□ 3.4
TNRC18-208ENST00000455076 FGD5Q6ZNL6 1462 aa36.27■■■■□ 3.4
TNRC18-208ENST00000455076 WDR97A6NE52 1622 aa36.21■■■■□ 3.39
TNRC18-208ENST00000455076 SOGA1O94964 1423 aa36.2■■■■□ 3.39
TNRC18-208ENST00000455076 RAD54L2Q9Y4B4 1467 aa36.19■■■■□ 3.38
TNRC18-208ENST00000455076 AQRO60306 1485 aaKnown RBP eCLIP36.13■■■■□ 3.372e-7■■■□□ 15.5
TNRC18-208ENST00000455076 BIVM-ERCC5R4GMW8 1640 aa36.05■■■■□ 3.36
TNRC18-208ENST00000455076 OSCARQ8IYS5 282 aa36.04■■■■□ 3.36
TNRC18-208ENST00000455076 TOP2BQ02880 1626 aa36.03■■■■□ 3.36
TNRC18-208ENST00000455076 WRNQ14191 1432 aaPredicted RBP eCLIP36.01■■■■□ 3.36
TNRC18-208ENST00000455076 TDRD9Q8NDG6 1382 aaKnown RBP36■■■■□ 3.35
TNRC18-208ENST00000455076 ABCA10Q8WWZ4 1543 aa35.97■■■■□ 3.35
TNRC18-208ENST00000455076 SYNJ1O43426 1573 aa35.96■■■■□ 3.35
TNRC18-208ENST00000455076 GRIN2BQ13224 1484 aa35.87■■■■□ 3.33
TNRC18-208ENST00000455076 ABCA5Q8WWZ7 1642 aa35.87■■■■□ 3.33
TNRC18-208ENST00000455076 CHD1O14646 1710 aa35.87■■■■□ 3.33
TNRC18-208ENST00000455076 MAGI1Q96QZ7 1491 aaPredicted RBP35.85■■■■□ 3.33
TNRC18-208ENST00000455076 SNAPC4Q5SXM2 1469 aa35.84■■■■□ 3.33
TNRC18-208ENST00000455076 GAPVD1Q14C86 1478 aa35.82■■■■□ 3.32
TNRC18-208ENST00000455076 PBRM1Q86U86 1689 aa35.8■■■■□ 3.32
TNRC18-208ENST00000455076 SYNJ2O15056 1496 aa35.68■■■■□ 3.3
TNRC18-208ENST00000455076 FBLN2P98095 1184 aa35.6■■■■□ 3.29
TNRC18-208ENST00000455076 RIMBP3CA6NJZ7 1639 aa35.58■■■■□ 3.29
TNRC18-208ENST00000455076 RIMBP3BA6NNM3 1639 aa35.58■■■■□ 3.29
TNRC18-208ENST00000455076 RIMBP3Q9UFD9 1639 aa35.58■■■■□ 3.29
TNRC18-208ENST00000455076 ARHGEF11O15085 1522 aa35.56■■■■□ 3.28
TNRC18-208ENST00000455076 CHMP7Q8WUX9 453 aaPredicted RBP35.55■■■■□ 3.28
TNRC18-208ENST00000455076 CLASP1Q7Z460 1538 aa35.55■■■■□ 3.28
TNRC18-208ENST00000455076 ERICH3Q5RHP9 1530 aa35.54■■■■□ 3.28
TNRC18-208ENST00000455076 ADAMTS12P58397 1594 aa35.53■■■■□ 3.28
TNRC18-208ENST00000455076 GRIN2AQ12879 1464 aa35.42■■■■□ 3.26
TNRC18-208ENST00000455076 FHAD1B1AJZ9 1412 aa35.42■■■■□ 3.26
TNRC18-208ENST00000455076 TRIM41Q8WV44 630 aa35.36■■■■□ 3.25
TNRC18-208ENST00000455076 NUP160Q12769 1436 aa35.32■■■■□ 3.24
TNRC18-208ENST00000455076 KIF27Q86VH2 1401 aa35.28■■■■□ 3.24
TNRC18-208ENST00000455076 ARAP1Q96P48 1450 aa35.26■■■■□ 3.23
TNRC18-208ENST00000455076 CEP170Q5SW79 1584 aa35.25■■■■□ 3.23
TNRC18-208ENST00000455076 CUL7Q14999 1698 aa35.17■■■■□ 3.22
TNRC18-208ENST00000455076 IGF1RP08069 1367 aa35.16■■■■□ 3.22
TNRC18-208ENST00000455076 SHROOM2Q13796 1616 aa35.11■■■■□ 3.21
TNRC18-208ENST00000455076 CYB5RLQ6IPT4 315 aa35.08■■■■□ 3.21
TNRC18-208ENST00000455076 RUSC2Q8N2Y8 1516 aa35.02■■■■□ 3.2
TNRC18-208ENST00000455076 ERCC6L2Q5T890 1561 aa34.95■■■■□ 3.18
TNRC18-208ENST00000455076 CARMIL1Q5VZK9 1371 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms