RNA–Protein interactions for RNA: ENST00000455073.1

LAMA4-210, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-210ENST00000455073 NISCHQ9Y2I1 1504 aa35.86■■■■□ 3.33
LAMA4-210ENST00000455073 CCDC180Q9P1Z9 1646 aa31.94■■■□□ 2.7
LAMA4-210ENST00000455073 ABCC9O60706 1549 aa30.89■■■□□ 2.54
LAMA4-210ENST00000455073 ZCCHC6Q5VYS8 1495 aaKnown RBP29.92■■■□□ 2.38
LAMA4-210ENST00000455073 NACADO15069 1562 aa29.91■■■□□ 2.38
LAMA4-210ENST00000455073 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
LAMA4-210ENST00000455073 MYO15BQ96JP2 1530 aa29.82■■■□□ 2.36
LAMA4-210ENST00000455073 DCAF8L2P0C7V8 631 aa29.77■■■□□ 2.36
LAMA4-210ENST00000455073 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
LAMA4-210ENST00000455073 UNC13AQ9UPW8 1703 aa29.38■■■□□ 2.29
LAMA4-210ENST00000455073 SCRIBQ14160 1630 aa29.02■■■□□ 2.24
LAMA4-210ENST00000455073 BICRAQ9NZM4 1560 aa29.01■■■□□ 2.23
LAMA4-210ENST00000455073 PABPN1Q86U42 306 aaKnown RBP eCLIP28.81■■■□□ 2.2
LAMA4-210ENST00000455073 SHROOM4Q9ULL8 1493 aa28.74■■■□□ 2.19
LAMA4-210ENST00000455073 EIF4G1Q04637 1599 aaKnown RBP28.2■■■□□ 2.1
LAMA4-210ENST00000455073 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
LAMA4-210ENST00000455073 CC2D2AQ9P2K1 1620 aa28.05■■■□□ 2.08
LAMA4-210ENST00000455073 CECR2Q9BXF3 1484 aa27.87■■■□□ 2.05
LAMA4-210ENST00000455073 SMARCA4P51532 1647 aa27.83■■■□□ 2.05
LAMA4-210ENST00000455073 BAZ1AQ9NRL2 1556 aaPredicted RBP27.8■■■□□ 2.04
LAMA4-210ENST00000455073 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
LAMA4-210ENST00000455073 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
LAMA4-210ENST00000455073 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
LAMA4-210ENST00000455073 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
LAMA4-210ENST00000455073 NCAPD3P42695 1498 aa27.55■■■□□ 2
LAMA4-210ENST00000455073 HMGXB3Q12766 1538 aa27.48■■□□□ 1.99
LAMA4-210ENST00000455073 WIZO95785 1651 aa27.38■■□□□ 1.97
LAMA4-210ENST00000455073 BAZ1BQ9UIG0 1483 aaKnown RBP27.34■■□□□ 1.97
LAMA4-210ENST00000455073 RSF1Q96T23 1441 aaPredicted RBP27.33■■□□□ 1.96
LAMA4-210ENST00000455073 TOP2AP11388 1531 aaKnown RBP27.08■■□□□ 1.93
LAMA4-210ENST00000455073 LAMC3Q9Y6N6 1575 aa26.85■■□□□ 1.89
LAMA4-210ENST00000455073 NESP48681 1621 aa26.8■■□□□ 1.88
LAMA4-210ENST00000455073 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
LAMA4-210ENST00000455073 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
LAMA4-210ENST00000455073 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
LAMA4-210ENST00000455073 PRDM2Q13029 1718 aa26.66■■□□□ 1.86
LAMA4-210ENST00000455073 CFTRP13569 1480 aa26.63■■□□□ 1.85
LAMA4-210ENST00000455073 KIF21AQ7Z4S6 1674 aa26.62■■□□□ 1.85
LAMA4-210ENST00000455073 ERCC6Q03468 1493 aa26.61■■□□□ 1.85
LAMA4-210ENST00000455073 PDS5BQ9NTI5 1447 aa26.57■■□□□ 1.84
LAMA4-210ENST00000455073 THOC2Q8NI27 1593 aaKnown RBP26.47■■□□□ 1.83
LAMA4-210ENST00000455073 FANCD2Q9BXW9 1451 aa26.42■■□□□ 1.82
LAMA4-210ENST00000455073 CEP164Q9UPV0 1460 aa26.38■■□□□ 1.81
LAMA4-210ENST00000455073 CUX2O14529 1486 aa26.35■■□□□ 1.81
LAMA4-210ENST00000455073 MRC2Q9UBG0 1479 aa26.31■■□□□ 1.8
LAMA4-210ENST00000455073 WDR62O43379 1518 aa26.28■■□□□ 1.8
LAMA4-210ENST00000455073 URB2Q14146 1524 aaKnown RBP26.17■■□□□ 1.78
LAMA4-210ENST00000455073 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
LAMA4-210ENST00000455073 DNMBPQ6XZF7 1577 aa26.06■■□□□ 1.76
LAMA4-210ENST00000455073 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
LAMA4-210ENST00000455073 CUX1P39880 1505 aa25.91■■□□□ 1.74
LAMA4-210ENST00000455073 IFT140Q96RY7 1462 aa25.83■■□□□ 1.73
LAMA4-210ENST00000455073 BIVM-ERCC5R4GMW8 1640 aa25.82■■□□□ 1.72
LAMA4-210ENST00000455073 POLA1P09884 1462 aaPredicted RBP25.82■■□□□ 1.72
LAMA4-210ENST00000455073 TARBP1Q13395 1621 aaKnown RBP25.81■■□□□ 1.72
LAMA4-210ENST00000455073 FGD5Q6ZNL6 1462 aa25.78■■□□□ 1.72
LAMA4-210ENST00000455073 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
LAMA4-210ENST00000455073 WRNQ14191 1432 aaPredicted RBP eCLIP25.76■■□□□ 1.71
LAMA4-210ENST00000455073 SYNJ1O43426 1573 aa25.74■■□□□ 1.71
LAMA4-210ENST00000455073 WDR97A6NE52 1622 aa25.7■■□□□ 1.71
LAMA4-210ENST00000455073 SOGA1O94964 1423 aa25.68■■□□□ 1.7
LAMA4-210ENST00000455073 ZNF608Q9ULD9 1512 aaPredicted RBP25.67■■□□□ 1.7
LAMA4-210ENST00000455073 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
LAMA4-210ENST00000455073 EIF4G3O43432 1585 aaKnown RBP25.66■■□□□ 1.7
LAMA4-210ENST00000455073 ABCA10Q8WWZ4 1543 aa25.57■■□□□ 1.68
LAMA4-210ENST00000455073 AQRO60306 1485 aaKnown RBP eCLIP25.52■■□□□ 1.68
LAMA4-210ENST00000455073 ABCA5Q8WWZ7 1642 aa25.51■■□□□ 1.67
LAMA4-210ENST00000455073 PBRM1Q86U86 1689 aa25.48■■□□□ 1.67
LAMA4-210ENST00000455073 TDRD9Q8NDG6 1382 aaKnown RBP25.47■■□□□ 1.67
LAMA4-210ENST00000455073 GAPVD1Q14C86 1478 aa25.41■■□□□ 1.66
LAMA4-210ENST00000455073 GRIN2BQ13224 1484 aa25.39■■□□□ 1.65
LAMA4-210ENST00000455073 CHD1O14646 1710 aa25.37■■□□□ 1.65
LAMA4-210ENST00000455073 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
LAMA4-210ENST00000455073 SNAPC4Q5SXM2 1469 aa25.32■■□□□ 1.64
LAMA4-210ENST00000455073 ERICH3Q5RHP9 1530 aa25.28■■□□□ 1.64
LAMA4-210ENST00000455073 DNAJC5Q9H3Z4 198 aa25.27■■□□□ 1.64
LAMA4-210ENST00000455073 ADAMTS12P58397 1594 aa25.22■■□□□ 1.63
LAMA4-210ENST00000455073 SYNJ2O15056 1496 aa25.21■■□□□ 1.63
LAMA4-210ENST00000455073 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
LAMA4-210ENST00000455073 KIF27Q86VH2 1401 aa25.2■■□□□ 1.63
LAMA4-210ENST00000455073 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
LAMA4-210ENST00000455073 CUL7Q14999 1698 aa25.13■■□□□ 1.61
LAMA4-210ENST00000455073 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
LAMA4-210ENST00000455073 FBLN2P98095 1184 aa25.12■■□□□ 1.61
LAMA4-210ENST00000455073 CHMP7Q8WUX9 453 aaPredicted RBP25.09■■□□□ 1.61
LAMA4-210ENST00000455073 GRIN2AQ12879 1464 aa25.08■■□□□ 1.6
LAMA4-210ENST00000455073 IGF1RP08069 1367 aa25.07■■□□□ 1.6
LAMA4-210ENST00000455073 CLASP1Q7Z460 1538 aa25.04■■□□□ 1.6
LAMA4-210ENST00000455073 RUSC2Q8N2Y8 1516 aa25.02■■□□□ 1.6
LAMA4-210ENST00000455073 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
LAMA4-210ENST00000455073 CEP170Q5SW79 1584 aa24.97■■□□□ 1.59
LAMA4-210ENST00000455073 NUP160Q12769 1436 aa24.97■■□□□ 1.59
LAMA4-210ENST00000455073 CARMIL1Q5VZK9 1371 aa24.92■■□□□ 1.58
LAMA4-210ENST00000455073 RIMBP3CA6NJZ7 1639 aa24.89■■□□□ 1.57
LAMA4-210ENST00000455073 RIMBP3BA6NNM3 1639 aa24.89■■□□□ 1.57
LAMA4-210ENST00000455073 RIMBP3Q9UFD9 1639 aa24.89■■□□□ 1.57
LAMA4-210ENST00000455073 EEA1Q15075 1411 aa24.86■■□□□ 1.57
LAMA4-210ENST00000455073 ARHGEF11O15085 1522 aa24.86■■□□□ 1.57
LAMA4-210ENST00000455073 SHROOM2Q13796 1616 aa24.85■■□□□ 1.57
LAMA4-210ENST00000455073 RAPGEF2Q9Y4G8 1499 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms