RNA–Protein interactions for RNA: ENST00000455062.2

NCF1-208, Transcript of neutrophil cytosolic factor 1, humanhuman

TSL 5

Gene NCF1, Length 1,437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCF1-208ENST00000455062 NISCHQ9Y2I1 1504 aa45.08■■■■■ 4.81
NCF1-208ENST00000455062 CCDC180Q9P1Z9 1646 aa40.08■■■■■ 4.01
NCF1-208ENST00000455062 ABCC9O60706 1549 aa39.43■■■■□ 3.9
NCF1-208ENST00000455062 RB1CC1Q8TDY2 1594 aa37.83■■■■□ 3.65
NCF1-208ENST00000455062 DCAF8L2P0C7V8 631 aa37.73■■■■□ 3.63
NCF1-208ENST00000455062 NACADO15069 1562 aa37.71■■■■□ 3.63
NCF1-208ENST00000455062 ZCCHC6Q5VYS8 1495 aaKnown RBP37.53■■■■□ 3.6
NCF1-208ENST00000455062 MYO15BQ96JP2 1530 aa37.46■■■■□ 3.59
NCF1-208ENST00000455062 DCAF1Q9Y4B6 1507 aa37.28■■■■□ 3.56
NCF1-208ENST00000455062 UNC13AQ9UPW8 1703 aa36.98■■■■□ 3.51
NCF1-208ENST00000455062 PABPN1Q86U42 306 aaKnown RBP eCLIP36.77■■■■□ 3.48
NCF1-208ENST00000455062 BICRAQ9NZM4 1560 aa36.69■■■■□ 3.46
NCF1-208ENST00000455062 SCRIBQ14160 1630 aa36.59■■■■□ 3.45
NCF1-208ENST00000455062 DNAJC5BQ9UF47 199 aa36.51■■■■□ 3.43
NCF1-208ENST00000455062 SHROOM4Q9ULL8 1493 aa36.31■■■■□ 3.4
NCF1-208ENST00000455062 EIF4G1Q04637 1599 aaKnown RBP35.74■■■■□ 3.31
NCF1-208ENST00000455062 CC2D2AQ9P2K1 1620 aa35.69■■■■□ 3.3
NCF1-208ENST00000455062 CECR2Q9BXF3 1484 aa35.49■■■■□ 3.27
NCF1-208ENST00000455062 SMARCA4P51532 1647 aa34.98■■■■□ 3.19
NCF1-208ENST00000455062 BAZ1AQ9NRL2 1556 aaPredicted RBP34.95■■■■□ 3.19
NCF1-208ENST00000455062 ATAD2BQ9ULI0 1458 aa34.81■■■■□ 3.16
NCF1-208ENST00000455062 NCAPD3P42695 1498 aa34.8■■■■□ 3.16
NCF1-208ENST00000455062 SMARCA2P51531 1590 aa34.77■■■■□ 3.16
NCF1-208ENST00000455062 MROH2BQ7Z745 1585 aa34.73■■■■□ 3.15
NCF1-208ENST00000455062 PEG3Q9GZU2 1588 aa34.63■■■■□ 3.13
NCF1-208ENST00000455062 HMGXB3Q12766 1538 aa34.62■■■■□ 3.13
NCF1-208ENST00000455062 BAZ1BQ9UIG0 1483 aaKnown RBP34.54■■■■□ 3.12
NCF1-208ENST00000455062 WIZO95785 1651 aa34.36■■■■□ 3.09
NCF1-208ENST00000455062 RSF1Q96T23 1441 aaPredicted RBP34.33■■■■□ 3.09
NCF1-208ENST00000455062 ERCC6Q03468 1493 aa34.04■■■■□ 3.04
NCF1-208ENST00000455062 NESP48681 1621 aa34.02■■■■□ 3.04
NCF1-208ENST00000455062 TOP2AP11388 1531 aaKnown RBP34■■■■□ 3.03
NCF1-208ENST00000455062 LAMC3Q9Y6N6 1575 aa33.94■■■■□ 3.02
NCF1-208ENST00000455062 CUX2O14529 1486 aa33.83■■■■□ 3.01
NCF1-208ENST00000455062 CADPSQ9ULU8 1353 aa33.79■■■■□ 3
NCF1-208ENST00000455062 PDS5BQ9NTI5 1447 aa33.71■■■□□ 2.99
NCF1-208ENST00000455062 KIF21AQ7Z4S6 1674 aa33.64■■■□□ 2.98
NCF1-208ENST00000455062 THOC2Q8NI27 1593 aaKnown RBP33.62■■■□□ 2.97
NCF1-208ENST00000455062 CCDC88BA6NC98 1476 aa33.6■■■□□ 2.97
NCF1-208ENST00000455062 CFTRP13569 1480 aa33.57■■■□□ 2.97
NCF1-208ENST00000455062 SUPT5HO00267 1087 aaKnown RBP33.46■■■□□ 2.95
NCF1-208ENST00000455062 FANCD2Q9BXW9 1451 aa33.41■■■□□ 2.94
NCF1-208ENST00000455062 MRC2Q9UBG0 1479 aa33.37■■■□□ 2.93
NCF1-208ENST00000455062 CEP164Q9UPV0 1460 aa33.37■■■□□ 2.93
NCF1-208ENST00000455062 PRDM2Q13029 1718 aa33.29■■■□□ 2.92
NCF1-208ENST00000455062 WDR62O43379 1518 aa33.29■■■□□ 2.92
NCF1-208ENST00000455062 DNAJC5Q9H3Z4 198 aa33.19■■■□□ 2.9
NCF1-208ENST00000455062 URB2Q14146 1524 aaKnown RBP33.06■■■□□ 2.88
NCF1-208ENST00000455062 TOPBP1Q92547 1522 aa32.86■■■□□ 2.85
NCF1-208ENST00000455062 ABCC8Q09428 1581 aa32.86■■■□□ 2.85
NCF1-208ENST00000455062 DNMBPQ6XZF7 1577 aa32.82■■■□□ 2.84
NCF1-208ENST00000455062 IFT140Q96RY7 1462 aa32.68■■■□□ 2.82
NCF1-208ENST00000455062 CUX1P39880 1505 aa32.59■■■□□ 2.81
NCF1-208ENST00000455062 POLA1P09884 1462 aaPredicted RBP32.58■■■□□ 2.81
NCF1-208ENST00000455062 ZNF608Q9ULD9 1512 aaPredicted RBP32.53■■■□□ 2.8
NCF1-208ENST00000455062 FGD5Q6ZNL6 1462 aa32.5■■■□□ 2.79
NCF1-208ENST00000455062 TARBP1Q13395 1621 aaKnown RBP32.49■■■□□ 2.79
NCF1-208ENST00000455062 SOGA1O94964 1423 aa32.46■■■□□ 2.79
NCF1-208ENST00000455062 RAD54L2Q9Y4B4 1467 aa32.44■■■□□ 2.78
NCF1-208ENST00000455062 EIF4G3O43432 1585 aaKnown RBP32.41■■■□□ 2.78
NCF1-208ENST00000455062 WRNQ14191 1432 aaPredicted RBP eCLIP32.38■■■□□ 2.77
NCF1-208ENST00000455062 OSCARQ8IYS5 282 aa32.35■■■□□ 2.77
NCF1-208ENST00000455062 AQRO60306 1485 aaKnown RBP eCLIP32.34■■■□□ 2.77
NCF1-208ENST00000455062 TOP2BQ02880 1626 aa32.29■■■□□ 2.76
NCF1-208ENST00000455062 BIVM-ERCC5R4GMW8 1640 aa32.29■■■□□ 2.76
NCF1-208ENST00000455062 SYNJ1O43426 1573 aa32.28■■■□□ 2.76
NCF1-208ENST00000455062 TDRD9Q8NDG6 1382 aaKnown RBP32.28■■■□□ 2.76
NCF1-208ENST00000455062 WDR97A6NE52 1622 aa32.24■■■□□ 2.75
NCF1-208ENST00000455062 ABCA10Q8WWZ4 1543 aa32.17■■■□□ 2.74
NCF1-208ENST00000455062 GRIN2BQ13224 1484 aa32.08■■■□□ 2.73
NCF1-208ENST00000455062 CHD1O14646 1710 aa32.07■■■□□ 2.73
NCF1-208ENST00000455062 GAPVD1Q14C86 1478 aa32.07■■■□□ 2.72
NCF1-208ENST00000455062 SNAPC4Q5SXM2 1469 aa32.04■■■□□ 2.72
NCF1-208ENST00000455062 ABCA5Q8WWZ7 1642 aa32.04■■■□□ 2.72
NCF1-208ENST00000455062 PBRM1Q86U86 1689 aa32■■■□□ 2.71
NCF1-208ENST00000455062 MAGI1Q96QZ7 1491 aaPredicted RBP32■■■□□ 2.71
NCF1-208ENST00000455062 FBLN2P98095 1184 aa32■■■□□ 2.71
NCF1-208ENST00000455062 CHMP7Q8WUX9 453 aaPredicted RBP31.9■■■□□ 2.7
NCF1-208ENST00000455062 TRIM41Q8WV44 630 aa31.9■■■□□ 2.7
NCF1-208ENST00000455062 SYNJ2O15056 1496 aa31.88■■■□□ 2.69
NCF1-208ENST00000455062 RIMBP3CA6NJZ7 1639 aa31.87■■■□□ 2.69
NCF1-208ENST00000455062 RIMBP3BA6NNM3 1639 aa31.87■■■□□ 2.69
NCF1-208ENST00000455062 RIMBP3Q9UFD9 1639 aa31.87■■■□□ 2.69
NCF1-208ENST00000455062 ARHGEF11O15085 1522 aa31.82■■■□□ 2.68
NCF1-208ENST00000455062 ERICH3Q5RHP9 1530 aa31.79■■■□□ 2.68
NCF1-208ENST00000455062 ADAMTS12P58397 1594 aa31.75■■■□□ 2.67
NCF1-208ENST00000455062 KIF27Q86VH2 1401 aa31.72■■■□□ 2.67
NCF1-208ENST00000455062 CLASP1Q7Z460 1538 aa31.72■■■□□ 2.67
NCF1-208ENST00000455062 FHAD1B1AJZ9 1412 aa31.71■■■□□ 2.67
NCF1-208ENST00000455062 GRIN2AQ12879 1464 aa31.66■■■□□ 2.66
NCF1-208ENST00000455062 IGF1RP08069 1367 aa31.58■■■□□ 2.65
NCF1-208ENST00000455062 ARAP1Q96P48 1450 aa31.53■■■□□ 2.64
NCF1-208ENST00000455062 CYB5RLQ6IPT4 315 aa31.53■■■□□ 2.64
NCF1-208ENST00000455062 NUP160Q12769 1436 aa31.52■■■□□ 2.64
NCF1-208ENST00000455062 CEP170Q5SW79 1584 aa31.5■■■□□ 2.63
NCF1-208ENST00000455062 CUL7Q14999 1698 aa31.49■■■□□ 2.63
NCF1-208ENST00000455062 CARMIL1Q5VZK9 1371 aa31.4■■■□□ 2.62
NCF1-208ENST00000455062 RUSC2Q8N2Y8 1516 aa31.4■■■□□ 2.62
NCF1-208ENST00000455062 SHROOM2Q13796 1616 aa31.3■■■□□ 2.6
NCF1-208ENST00000455062 ERCC6L2Q5T890 1561 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms