RNA–Protein interactions for RNA: ENST00000454918.1

SPATA3-207, Transcript of spermatogenesis associated 3, humanhuman

TSL 2

Gene SPATA3, Length 332 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA3-207ENST00000454918 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
SPATA3-207ENST00000454918 ABCC9O60706 1549 aa22.06■■□□□ 1.12
SPATA3-207ENST00000454918 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
SPATA3-207ENST00000454918 DNAJC5BQ9UF47 199 aa20.98■□□□□ 0.95
SPATA3-207ENST00000454918 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
SPATA3-207ENST00000454918 NACADO15069 1562 aa20.66■□□□□ 0.9
SPATA3-207ENST00000454918 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
SPATA3-207ENST00000454918 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
SPATA3-207ENST00000454918 UNC13AQ9UPW8 1703 aa20.47■□□□□ 0.87
SPATA3-207ENST00000454918 BICRAQ9NZM4 1560 aa20.35■□□□□ 0.85
SPATA3-207ENST00000454918 MYO15BQ96JP2 1530 aa20.31■□□□□ 0.84
SPATA3-207ENST00000454918 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
SPATA3-207ENST00000454918 DCAF1Q9Y4B6 1507 aa19.98■□□□□ 0.79
SPATA3-207ENST00000454918 CC2D2AQ9P2K1 1620 aa19.92■□□□□ 0.78
SPATA3-207ENST00000454918 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
SPATA3-207ENST00000454918 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
SPATA3-207ENST00000454918 CECR2Q9BXF3 1484 aa19.87■□□□□ 0.77
SPATA3-207ENST00000454918 EIF4G1Q04637 1599 aaKnown RBP19.82■□□□□ 0.76
SPATA3-207ENST00000454918 DNAJC5Q9H3Z4 198 aa19.31■□□□□ 0.68
SPATA3-207ENST00000454918 NCAPD3P42695 1498 aa19.11■□□□□ 0.65
SPATA3-207ENST00000454918 CUX2O14529 1486 aa19.03■□□□□ 0.64
SPATA3-207ENST00000454918 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
SPATA3-207ENST00000454918 ERCC6Q03468 1493 aa18.99■□□□□ 0.63
SPATA3-207ENST00000454918 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
SPATA3-207ENST00000454918 NESP48681 1621 aa18.94■□□□□ 0.62
SPATA3-207ENST00000454918 HMGXB3Q12766 1538 aa18.93■□□□□ 0.62
SPATA3-207ENST00000454918 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
SPATA3-207ENST00000454918 BAZ1BQ9UIG0 1483 aaKnown RBP18.8■□□□□ 0.6
SPATA3-207ENST00000454918 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
SPATA3-207ENST00000454918 PEG3Q9GZU2 1588 aa18.77■□□□□ 0.6
SPATA3-207ENST00000454918 THOC2Q8NI27 1593 aaKnown RBP18.75■□□□□ 0.59
SPATA3-207ENST00000454918 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
SPATA3-207ENST00000454918 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
SPATA3-207ENST00000454918 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
SPATA3-207ENST00000454918 PDS5BQ9NTI5 1447 aa18.55■□□□□ 0.56
SPATA3-207ENST00000454918 CADPSQ9ULU8 1353 aa18.51■□□□□ 0.55
SPATA3-207ENST00000454918 WIZO95785 1651 aa18.49■□□□□ 0.55
SPATA3-207ENST00000454918 MRC2Q9UBG0 1479 aa18.45■□□□□ 0.54
SPATA3-207ENST00000454918 WDR62O43379 1518 aa18.43■□□□□ 0.54
SPATA3-207ENST00000454918 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
SPATA3-207ENST00000454918 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
SPATA3-207ENST00000454918 FANCD2Q9BXW9 1451 aa18.3■□□□□ 0.52
SPATA3-207ENST00000454918 CFTRP13569 1480 aa18.26■□□□□ 0.51
SPATA3-207ENST00000454918 RSF1Q96T23 1441 aaPredicted RBP18.24■□□□□ 0.51
SPATA3-207ENST00000454918 URB2Q14146 1524 aaKnown RBP18.21■□□□□ 0.51
SPATA3-207ENST00000454918 TOP2AP11388 1531 aaKnown RBP18.19■□□□□ 0.5
SPATA3-207ENST00000454918 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
SPATA3-207ENST00000454918 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
SPATA3-207ENST00000454918 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
SPATA3-207ENST00000454918 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.48
SPATA3-207ENST00000454918 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
SPATA3-207ENST00000454918 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
SPATA3-207ENST00000454918 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
SPATA3-207ENST00000454918 IFT140Q96RY7 1462 aa17.96■□□□□ 0.47
SPATA3-207ENST00000454918 TOPBP1Q92547 1522 aa17.95■□□□□ 0.46
SPATA3-207ENST00000454918 ARHGEF11O15085 1522 aa17.89■□□□□ 0.45
SPATA3-207ENST00000454918 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
SPATA3-207ENST00000454918 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
SPATA3-207ENST00000454918 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.44
SPATA3-207ENST00000454918 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.44
SPATA3-207ENST00000454918 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
SPATA3-207ENST00000454918 CHD1O14646 1710 aa17.8■□□□□ 0.44
SPATA3-207ENST00000454918 CYB5RLQ6IPT4 315 aa17.76■□□□□ 0.43
SPATA3-207ENST00000454918 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
SPATA3-207ENST00000454918 RAD54L2Q9Y4B4 1467 aa17.73■□□□□ 0.43
SPATA3-207ENST00000454918 ARAP1Q96P48 1450 aa17.72■□□□□ 0.43
SPATA3-207ENST00000454918 FBLN2P98095 1184 aa17.69■□□□□ 0.42
SPATA3-207ENST00000454918 TDRD9Q8NDG6 1382 aaKnown RBP17.67■□□□□ 0.42
SPATA3-207ENST00000454918 SOGA1O94964 1423 aa17.64■□□□□ 0.42
SPATA3-207ENST00000454918 FGD5Q6ZNL6 1462 aa17.62■□□□□ 0.41
SPATA3-207ENST00000454918 SNAPC4Q5SXM2 1469 aa17.61■□□□□ 0.41
SPATA3-207ENST00000454918 CUX1P39880 1505 aa17.59■□□□□ 0.41
SPATA3-207ENST00000454918 CLASP1Q7Z460 1538 aa17.59■□□□□ 0.41
SPATA3-207ENST00000454918 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
SPATA3-207ENST00000454918 WDR97A6NE52 1622 aa17.53■□□□□ 0.4
SPATA3-207ENST00000454918 MAGI1Q96QZ7 1491 aaPredicted RBP17.51■□□□□ 0.39
SPATA3-207ENST00000454918 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
SPATA3-207ENST00000454918 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
SPATA3-207ENST00000454918 SYNJ1O43426 1573 aa17.49■□□□□ 0.39
SPATA3-207ENST00000454918 SYNJ2O15056 1496 aa17.47■□□□□ 0.39
SPATA3-207ENST00000454918 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
SPATA3-207ENST00000454918 GAPVD1Q14C86 1478 aa17.43■□□□□ 0.38
SPATA3-207ENST00000454918 ABCA5Q8WWZ7 1642 aa17.4■□□□□ 0.38
SPATA3-207ENST00000454918 ABCA10Q8WWZ4 1543 aa17.39■□□□□ 0.37
SPATA3-207ENST00000454918 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
SPATA3-207ENST00000454918 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
SPATA3-207ENST00000454918 CEP170Q5SW79 1584 aa17.28■□□□□ 0.36
SPATA3-207ENST00000454918 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
SPATA3-207ENST00000454918 SUPT5HO00267 1087 aaKnown RBP17.26■□□□□ 0.35
SPATA3-207ENST00000454918 NUP160Q12769 1436 aa17.26■□□□□ 0.35
SPATA3-207ENST00000454918 WRNQ14191 1432 aaPredicted RBP eCLIP17.24■□□□□ 0.35
SPATA3-207ENST00000454918 BIVM-ERCC5R4GMW8 1640 aa17.23■□□□□ 0.35
SPATA3-207ENST00000454918 TOP2BQ02880 1626 aa17.21■□□□□ 0.35
SPATA3-207ENST00000454918 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
SPATA3-207ENST00000454918 FHAD1B1AJZ9 1412 aa17.19■□□□□ 0.34
SPATA3-207ENST00000454918 AEBP2Q6ZN18 517 aaPredicted RBP17.17■□□□□ 0.34
SPATA3-207ENST00000454918 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
SPATA3-207ENST00000454918 KIF13AQ9H1H9 1805 aa17.12■□□□□ 0.33
SPATA3-207ENST00000454918 PRG4Q92954 1404 aaPredicted RBP17.1■□□□□ 0.33
SPATA3-207ENST00000454918 JPH4Q96JJ6 628 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms