RNA–Protein interactions for RNA: ENST00000454614.1

CTSLP4-201, Transcript of cathepsin L pseudogene 4, humanhuman

BASIC

Gene CTSLP4, Length 1,002 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSLP4-201ENST00000454614 NISCHQ9Y2I1 1504 aa23.56■■□□□ 1.36
CTSLP4-201ENST00000454614 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
CTSLP4-201ENST00000454614 ABCC9O60706 1549 aa20.64■□□□□ 0.9
CTSLP4-201ENST00000454614 DCAF8L2P0C7V8 631 aa19.87■□□□□ 0.77
CTSLP4-201ENST00000454614 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
CTSLP4-201ENST00000454614 NACADO15069 1562 aa19.78■□□□□ 0.76
CTSLP4-201ENST00000454614 MYO15BQ96JP2 1530 aa19.61■□□□□ 0.73
CTSLP4-201ENST00000454614 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
CTSLP4-201ENST00000454614 DCAF1Q9Y4B6 1507 aa19.49■□□□□ 0.71
CTSLP4-201ENST00000454614 UNC13AQ9UPW8 1703 aa19.32■□□□□ 0.68
CTSLP4-201ENST00000454614 PABPN1Q86U42 306 aaKnown RBP eCLIP19.29■□□□□ 0.68
CTSLP4-201ENST00000454614 SCRIBQ14160 1630 aa19.16■□□□□ 0.66
CTSLP4-201ENST00000454614 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
CTSLP4-201ENST00000454614 SHROOM4Q9ULL8 1493 aa19.02■□□□□ 0.63
CTSLP4-201ENST00000454614 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
CTSLP4-201ENST00000454614 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
CTSLP4-201ENST00000454614 CC2D2AQ9P2K1 1620 aa18.66■□□□□ 0.58
CTSLP4-201ENST00000454614 CECR2Q9BXF3 1484 aa18.57■□□□□ 0.56
CTSLP4-201ENST00000454614 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
CTSLP4-201ENST00000454614 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
CTSLP4-201ENST00000454614 NCAPD3P42695 1498 aa18.24■□□□□ 0.51
CTSLP4-201ENST00000454614 SMARCA2P51531 1590 aa18.24■□□□□ 0.51
CTSLP4-201ENST00000454614 ATAD2BQ9ULI0 1458 aa18.23■□□□□ 0.51
CTSLP4-201ENST00000454614 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
CTSLP4-201ENST00000454614 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
CTSLP4-201ENST00000454614 BAZ1BQ9UIG0 1483 aaKnown RBP18.12■□□□□ 0.49
CTSLP4-201ENST00000454614 PEG3Q9GZU2 1588 aa18.1■□□□□ 0.49
CTSLP4-201ENST00000454614 WIZO95785 1651 aa17.96■□□□□ 0.47
CTSLP4-201ENST00000454614 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
CTSLP4-201ENST00000454614 ERCC6Q03468 1493 aa17.87■□□□□ 0.45
CTSLP4-201ENST00000454614 NESP48681 1621 aa17.8■□□□□ 0.44
CTSLP4-201ENST00000454614 LAMC3Q9Y6N6 1575 aa17.8■□□□□ 0.44
CTSLP4-201ENST00000454614 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.44
CTSLP4-201ENST00000454614 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
CTSLP4-201ENST00000454614 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
CTSLP4-201ENST00000454614 CUX2O14529 1486 aa17.66■□□□□ 0.42
CTSLP4-201ENST00000454614 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
CTSLP4-201ENST00000454614 CFTRP13569 1480 aa17.57■□□□□ 0.4
CTSLP4-201ENST00000454614 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
CTSLP4-201ENST00000454614 THOC2Q8NI27 1593 aaKnown RBP17.54■□□□□ 0.4
CTSLP4-201ENST00000454614 FANCD2Q9BXW9 1451 aa17.52■□□□□ 0.4
CTSLP4-201ENST00000454614 CEP164Q9UPV0 1460 aa17.52■□□□□ 0.4
CTSLP4-201ENST00000454614 MRC2Q9UBG0 1479 aa17.5■□□□□ 0.39
CTSLP4-201ENST00000454614 SUPT5HO00267 1087 aaKnown RBP17.49■□□□□ 0.39
CTSLP4-201ENST00000454614 PRDM2Q13029 1718 aa17.44■□□□□ 0.38
CTSLP4-201ENST00000454614 WDR62O43379 1518 aa17.42■□□□□ 0.38
CTSLP4-201ENST00000454614 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
CTSLP4-201ENST00000454614 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
CTSLP4-201ENST00000454614 DNAJC5Q9H3Z4 198 aa17.22■□□□□ 0.35
CTSLP4-201ENST00000454614 TOPBP1Q92547 1522 aa17.21■□□□□ 0.34
CTSLP4-201ENST00000454614 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
CTSLP4-201ENST00000454614 IFT140Q96RY7 1462 aa17.16■□□□□ 0.34
CTSLP4-201ENST00000454614 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
CTSLP4-201ENST00000454614 ZNF608Q9ULD9 1512 aaPredicted RBP17.03■□□□□ 0.32
CTSLP4-201ENST00000454614 SOGA1O94964 1423 aa17.03■□□□□ 0.32
CTSLP4-201ENST00000454614 CUX1P39880 1505 aa17.02■□□□□ 0.32
CTSLP4-201ENST00000454614 FGD5Q6ZNL6 1462 aa17.01■□□□□ 0.31
CTSLP4-201ENST00000454614 TARBP1Q13395 1621 aaKnown RBP17■□□□□ 0.31
CTSLP4-201ENST00000454614 RAD54L2Q9Y4B4 1467 aa16.99■□□□□ 0.31
CTSLP4-201ENST00000454614 EIF4G3O43432 1585 aaKnown RBP16.98■□□□□ 0.31
CTSLP4-201ENST00000454614 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
CTSLP4-201ENST00000454614 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.31
CTSLP4-201ENST00000454614 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
CTSLP4-201ENST00000454614 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
CTSLP4-201ENST00000454614 WDR97A6NE52 1622 aa16.92■□□□□ 0.3
CTSLP4-201ENST00000454614 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
CTSLP4-201ENST00000454614 FBLN2P98095 1184 aa16.87■□□□□ 0.29
CTSLP4-201ENST00000454614 BIVM-ERCC5R4GMW8 1640 aa16.87■□□□□ 0.29
CTSLP4-201ENST00000454614 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
CTSLP4-201ENST00000454614 SYNJ1O43426 1573 aa16.84■□□□□ 0.29
CTSLP4-201ENST00000454614 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
CTSLP4-201ENST00000454614 GAPVD1Q14C86 1478 aa16.82■□□□□ 0.28
CTSLP4-201ENST00000454614 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
CTSLP4-201ENST00000454614 CHMP7Q8WUX9 453 aaPredicted RBP16.8■□□□□ 0.28
CTSLP4-201ENST00000454614 MAGI1Q96QZ7 1491 aaPredicted RBP16.79■□□□□ 0.28
CTSLP4-201ENST00000454614 CHD1O14646 1710 aa16.79■□□□□ 0.28
CTSLP4-201ENST00000454614 PBRM1Q86U86 1689 aa16.77■□□□□ 0.28
CTSLP4-201ENST00000454614 ABCA5Q8WWZ7 1642 aa16.75■□□□□ 0.27
CTSLP4-201ENST00000454614 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
CTSLP4-201ENST00000454614 TRIM41Q8WV44 630 aa16.69■□□□□ 0.26
CTSLP4-201ENST00000454614 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
CTSLP4-201ENST00000454614 RIMBP3CA6NJZ7 1639 aa16.63■□□□□ 0.25
CTSLP4-201ENST00000454614 RIMBP3BA6NNM3 1639 aa16.63■□□□□ 0.25
CTSLP4-201ENST00000454614 RIMBP3Q9UFD9 1639 aa16.63■□□□□ 0.25
CTSLP4-201ENST00000454614 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
CTSLP4-201ENST00000454614 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
CTSLP4-201ENST00000454614 ARHGEF11O15085 1522 aa16.61■□□□□ 0.25
CTSLP4-201ENST00000454614 ADAMTS12P58397 1594 aa16.61■□□□□ 0.25
CTSLP4-201ENST00000454614 GRIN2AQ12879 1464 aa16.6■□□□□ 0.25
CTSLP4-201ENST00000454614 CLASP1Q7Z460 1538 aa16.57■□□□□ 0.24
CTSLP4-201ENST00000454614 CYB5RLQ6IPT4 315 aa16.54■□□□□ 0.24
CTSLP4-201ENST00000454614 IGF1RP08069 1367 aa16.51■□□□□ 0.23
CTSLP4-201ENST00000454614 NUP160Q12769 1436 aa16.5■□□□□ 0.23
CTSLP4-201ENST00000454614 CUL7Q14999 1698 aa16.5■□□□□ 0.23
CTSLP4-201ENST00000454614 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
CTSLP4-201ENST00000454614 CARMIL1Q5VZK9 1371 aa16.45■□□□□ 0.22
CTSLP4-201ENST00000454614 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
CTSLP4-201ENST00000454614 JPH4Q96JJ6 628 aa16.4■□□□□ 0.22
CTSLP4-201ENST00000454614 SHROOM2Q13796 1616 aa16.37■□□□□ 0.21
CTSLP4-201ENST00000454614 RUSC2Q8N2Y8 1516 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms