RNA–Protein interactions for RNA: ENST00000454561.2

TRBV5-4-201, Transcript of T cell receptor beta variable 5-4, humanhuman

APPRIS P1 BASIC

Gene TRBV5-4, Length 544 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4-201ENST00000454561 NISCHQ9Y2I1 1504 aa18.11■□□□□ 0.49
TRBV5-4-201ENST00000454561 CCDC180Q9P1Z9 1646 aa16.13■□□□□ 0.17
TRBV5-4-201ENST00000454561 ABCC9O60706 1549 aa15.84■□□□□ 0.13
TRBV5-4-201ENST00000454561 DCAF8L2P0C7V8 631 aa15.25■□□□□ 0.03
TRBV5-4-201ENST00000454561 RB1CC1Q8TDY2 1594 aa15.22■□□□□ 0.03
TRBV5-4-201ENST00000454561 NACADO15069 1562 aa15.19■□□□□ 0.02
TRBV5-4-201ENST00000454561 MYO15BQ96JP2 1530 aa15.06■□□□□ 0
TRBV5-4-201ENST00000454561 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
TRBV5-4-201ENST00000454561 DCAF1Q9Y4B6 1507 aa14.97□□□□□ -0.01
TRBV5-4-201ENST00000454561 UNC13AQ9UPW8 1703 aa14.92□□□□□ -0.02
TRBV5-4-201ENST00000454561 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRBV5-4-201ENST00000454561 BICRAQ9NZM4 1560 aa14.74□□□□□ -0.05
TRBV5-4-201ENST00000454561 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
TRBV5-4-201ENST00000454561 DNAJC5BQ9UF47 199 aa14.62□□□□□ -0.07
TRBV5-4-201ENST00000454561 SHROOM4Q9ULL8 1493 aa14.57□□□□□ -0.08
TRBV5-4-201ENST00000454561 EIF4G1Q04637 1599 aaKnown RBP14.35□□□□□ -0.11
TRBV5-4-201ENST00000454561 CC2D2AQ9P2K1 1620 aa14.33□□□□□ -0.12
TRBV5-4-201ENST00000454561 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
TRBV5-4-201ENST00000454561 SMARCA4P51532 1647 aa14.06□□□□□ -0.16
TRBV5-4-201ENST00000454561 BAZ1AQ9NRL2 1556 aaPredicted RBP14.04□□□□□ -0.16
TRBV5-4-201ENST00000454561 NCAPD3P42695 1498 aa14.01□□□□□ -0.17
TRBV5-4-201ENST00000454561 SMARCA2P51531 1590 aa14□□□□□ -0.17
TRBV5-4-201ENST00000454561 ATAD2BQ9ULI0 1458 aa13.99□□□□□ -0.17
TRBV5-4-201ENST00000454561 MROH2BQ7Z745 1585 aa13.95□□□□□ -0.18
TRBV5-4-201ENST00000454561 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
TRBV5-4-201ENST00000454561 HMGXB3Q12766 1538 aa13.91□□□□□ -0.18
TRBV5-4-201ENST00000454561 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
TRBV5-4-201ENST00000454561 WIZO95785 1651 aa13.82□□□□□ -0.2
TRBV5-4-201ENST00000454561 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
TRBV5-4-201ENST00000454561 NESP48681 1621 aa13.68□□□□□ -0.22
TRBV5-4-201ENST00000454561 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
TRBV5-4-201ENST00000454561 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
TRBV5-4-201ENST00000454561 TOP2AP11388 1531 aaKnown RBP13.64□□□□□ -0.23
TRBV5-4-201ENST00000454561 CADPSQ9ULU8 1353 aa13.61□□□□□ -0.23
TRBV5-4-201ENST00000454561 AEBP2Q6ZN18 517 aaPredicted RBP13.59□□□□□ -0.23
TRBV5-4-201ENST00000454561 PDS5BQ9NTI5 1447 aa13.57□□□□□ -0.24
TRBV5-4-201ENST00000454561 KIF21AQ7Z4S6 1674 aa13.55□□□□□ -0.24
TRBV5-4-201ENST00000454561 CUX2O14529 1486 aa13.53□□□□□ -0.24
TRBV5-4-201ENST00000454561 CCDC88BA6NC98 1476 aa13.5□□□□□ -0.25
TRBV5-4-201ENST00000454561 CFTRP13569 1480 aa13.5□□□□□ -0.25
TRBV5-4-201ENST00000454561 THOC2Q8NI27 1593 aaKnown RBP13.46□□□□□ -0.25
TRBV5-4-201ENST00000454561 PRDM2Q13029 1718 aa13.45□□□□□ -0.26
TRBV5-4-201ENST00000454561 SUPT5HO00267 1087 aaKnown RBP13.45□□□□□ -0.26
TRBV5-4-201ENST00000454561 FANCD2Q9BXW9 1451 aa13.43□□□□□ -0.26
TRBV5-4-201ENST00000454561 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
TRBV5-4-201ENST00000454561 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
TRBV5-4-201ENST00000454561 WDR62O43379 1518 aa13.35□□□□□ -0.27
TRBV5-4-201ENST00000454561 URB2Q14146 1524 aaKnown RBP13.29□□□□□ -0.28
TRBV5-4-201ENST00000454561 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
TRBV5-4-201ENST00000454561 DNAJC5Q9H3Z4 198 aa13.24□□□□□ -0.29
TRBV5-4-201ENST00000454561 TOPBP1Q92547 1522 aa13.22□□□□□ -0.29
TRBV5-4-201ENST00000454561 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
TRBV5-4-201ENST00000454561 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
TRBV5-4-201ENST00000454561 CHIC1Q5VXU3 224 aa13.13□□□□□ -0.31
TRBV5-4-201ENST00000454561 POLA1P09884 1462 aaPredicted RBP13.1□□□□□ -0.31
TRBV5-4-201ENST00000454561 CUX1P39880 1505 aa13.08□□□□□ -0.31
TRBV5-4-201ENST00000454561 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.31
TRBV5-4-201ENST00000454561 TARBP1Q13395 1621 aaKnown RBP13.08□□□□□ -0.32
TRBV5-4-201ENST00000454561 SOGA1O94964 1423 aa13.07□□□□□ -0.32
TRBV5-4-201ENST00000454561 FGD5Q6ZNL6 1462 aa13.05□□□□□ -0.32
TRBV5-4-201ENST00000454561 RAD54L2Q9Y4B4 1467 aa13.05□□□□□ -0.32
TRBV5-4-201ENST00000454561 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
TRBV5-4-201ENST00000454561 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRBV5-4-201ENST00000454561 EIF4G3O43432 1585 aaKnown RBP13.02□□□□□ -0.33
TRBV5-4-201ENST00000454561 TDRD9Q8NDG6 1382 aaKnown RBP13.01□□□□□ -0.33
TRBV5-4-201ENST00000454561 WRNQ14191 1432 aaPredicted RBP eCLIP12.99□□□□□ -0.33
TRBV5-4-201ENST00000454561 WDR97A6NE52 1622 aa12.97□□□□□ -0.33
TRBV5-4-201ENST00000454561 TOP2BQ02880 1626 aa12.97□□□□□ -0.33
TRBV5-4-201ENST00000454561 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
TRBV5-4-201ENST00000454561 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
TRBV5-4-201ENST00000454561 FBLN2P98095 1184 aa12.93□□□□□ -0.34
TRBV5-4-201ENST00000454561 ABCA10Q8WWZ4 1543 aa12.93□□□□□ -0.34
TRBV5-4-201ENST00000454561 CHD1O14646 1710 aa12.92□□□□□ -0.34
TRBV5-4-201ENST00000454561 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
TRBV5-4-201ENST00000454561 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
TRBV5-4-201ENST00000454561 CHMP7Q8WUX9 453 aaPredicted RBP12.89□□□□□ -0.35
TRBV5-4-201ENST00000454561 PBRM1Q86U86 1689 aa12.89□□□□□ -0.35
TRBV5-4-201ENST00000454561 SNAPC4Q5SXM2 1469 aa12.87□□□□□ -0.35
TRBV5-4-201ENST00000454561 MAGI1Q96QZ7 1491 aaPredicted RBP12.87□□□□□ -0.35
TRBV5-4-201ENST00000454561 ABCA5Q8WWZ7 1642 aa12.87□□□□□ -0.35
TRBV5-4-201ENST00000454561 SYNJ2O15056 1496 aa12.83□□□□□ -0.36
TRBV5-4-201ENST00000454561 ERICH3Q5RHP9 1530 aa12.78□□□□□ -0.36
TRBV5-4-201ENST00000454561 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
TRBV5-4-201ENST00000454561 RIMBP3CA6NJZ7 1639 aa12.77□□□□□ -0.37
TRBV5-4-201ENST00000454561 RIMBP3BA6NNM3 1639 aa12.77□□□□□ -0.37
TRBV5-4-201ENST00000454561 RIMBP3Q9UFD9 1639 aa12.77□□□□□ -0.37
TRBV5-4-201ENST00000454561 FHAD1B1AJZ9 1412 aa12.75□□□□□ -0.37
TRBV5-4-201ENST00000454561 ARHGEF11O15085 1522 aa12.74□□□□□ -0.37
TRBV5-4-201ENST00000454561 KIF27Q86VH2 1401 aa12.74□□□□□ -0.37
TRBV5-4-201ENST00000454561 ADAMTS12P58397 1594 aa12.73□□□□□ -0.37
TRBV5-4-201ENST00000454561 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
TRBV5-4-201ENST00000454561 GRIN2AQ12879 1464 aa12.72□□□□□ -0.37
TRBV5-4-201ENST00000454561 IGF1RP08069 1367 aa12.71□□□□□ -0.37
TRBV5-4-201ENST00000454561 CYB5RLQ6IPT4 315 aa12.7□□□□□ -0.38
TRBV5-4-201ENST00000454561 NUP160Q12769 1436 aa12.67□□□□□ -0.38
TRBV5-4-201ENST00000454561 CEP170Q5SW79 1584 aa12.66□□□□□ -0.38
TRBV5-4-201ENST00000454561 CUL7Q14999 1698 aa12.66□□□□□ -0.38
TRBV5-4-201ENST00000454561 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
TRBV5-4-201ENST00000454561 ARAP1Q96P48 1450 aa12.62□□□□□ -0.39
TRBV5-4-201ENST00000454561 JPH4Q96JJ6 628 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms