RNA–Protein interactions for RNA: ENST00000454531.1

NME6-215, Transcript of NME/NM23 nucleoside diphosphate kinase 6, humanhuman

TSL 4

Gene NME6, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME6-215ENST00000454531 NISCHQ9Y2I1 1504 aa39.18■■■■□ 3.86
NME6-215ENST00000454531 ABCC9O60706 1549 aa36.03■■■■□ 3.36
NME6-215ENST00000454531 CCDC180Q9P1Z9 1646 aa35.31■■■■□ 3.24
NME6-215ENST00000454531 DNAJC5BQ9UF47 199 aa34.48■■■■□ 3.11
NME6-215ENST00000454531 RB1CC1Q8TDY2 1594 aa33.94■■■■□ 3.02
NME6-215ENST00000454531 NACADO15069 1562 aa33.57■■■□□ 2.96
NME6-215ENST00000454531 PABPN1Q86U42 306 aaKnown RBP eCLIP33.55■■■□□ 2.96
NME6-215ENST00000454531 DCAF8L2P0C7V8 631 aa33.46■■■□□ 2.95
NME6-215ENST00000454531 UNC13AQ9UPW8 1703 aa33.23■■■□□ 2.91
NME6-215ENST00000454531 BICRAQ9NZM4 1560 aa33.05■■■□□ 2.88
NME6-215ENST00000454531 MYO15BQ96JP2 1530 aa32.88■■■□□ 2.85
NME6-215ENST00000454531 CECR2Q9BXF3 1484 aa32.49■■■□□ 2.79
NME6-215ENST00000454531 CC2D2AQ9P2K1 1620 aa32.49■■■□□ 2.79
NME6-215ENST00000454531 SHROOM4Q9ULL8 1493 aa32.39■■■□□ 2.78
NME6-215ENST00000454531 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
NME6-215ENST00000454531 EIF4G1Q04637 1599 aaKnown RBP32.26■■■□□ 2.75
NME6-215ENST00000454531 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.75
NME6-215ENST00000454531 SCRIBQ14160 1630 aa32.23■■■□□ 2.75
NME6-215ENST00000454531 DNAJC5Q9H3Z4 198 aa32.01■■■□□ 2.71
NME6-215ENST00000454531 CUX2O14529 1486 aa31.22■■■□□ 2.59
NME6-215ENST00000454531 ERCC6Q03468 1493 aa31.1■■■□□ 2.57
NME6-215ENST00000454531 NCAPD3P42695 1498 aa31.05■■■□□ 2.56
NME6-215ENST00000454531 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.53
NME6-215ENST00000454531 NESP48681 1621 aa30.81■■■□□ 2.52
NME6-215ENST00000454531 SMARCA2P51531 1590 aa30.7■■■□□ 2.5
NME6-215ENST00000454531 HMGXB3Q12766 1538 aa30.69■■■□□ 2.5
NME6-215ENST00000454531 SMARCA4P51532 1647 aa30.66■■■□□ 2.5
NME6-215ENST00000454531 THOC2Q8NI27 1593 aaKnown RBP30.53■■■□□ 2.48
NME6-215ENST00000454531 BAZ1BQ9UIG0 1483 aaKnown RBP30.51■■■□□ 2.48
NME6-215ENST00000454531 BAZ1AQ9NRL2 1556 aaPredicted RBP30.4■■■□□ 2.46
NME6-215ENST00000454531 LAMC3Q9Y6N6 1575 aa30.4■■■□□ 2.46
NME6-215ENST00000454531 TRIM41Q8WV44 630 aa30.38■■■□□ 2.45
NME6-215ENST00000454531 PEG3Q9GZU2 1588 aa30.34■■■□□ 2.45
NME6-215ENST00000454531 KIF21AQ7Z4S6 1674 aa30.33■■■□□ 2.45
NME6-215ENST00000454531 PDS5BQ9NTI5 1447 aa30.27■■■□□ 2.44
NME6-215ENST00000454531 MROH2BQ7Z745 1585 aa30.22■■■□□ 2.43
NME6-215ENST00000454531 CADPSQ9ULU8 1353 aa30.1■■■□□ 2.41
NME6-215ENST00000454531 MRC2Q9UBG0 1479 aa30.04■■■□□ 2.4
NME6-215ENST00000454531 WDR62O43379 1518 aa29.97■■■□□ 2.39
NME6-215ENST00000454531 WIZO95785 1651 aa29.82■■■□□ 2.36
NME6-215ENST00000454531 OSCARQ8IYS5 282 aa29.8■■■□□ 2.36
NME6-215ENST00000454531 CEP164Q9UPV0 1460 aa29.79■■■□□ 2.36
NME6-215ENST00000454531 FANCD2Q9BXW9 1451 aa29.74■■■□□ 2.35
NME6-215ENST00000454531 CFTRP13569 1480 aa29.61■■■□□ 2.33
NME6-215ENST00000454531 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
NME6-215ENST00000454531 RIMBP3CA6NJZ7 1639 aa29.43■■■□□ 2.3
NME6-215ENST00000454531 RIMBP3BA6NNM3 1639 aa29.43■■■□□ 2.3
NME6-215ENST00000454531 RIMBP3Q9UFD9 1639 aa29.43■■■□□ 2.3
NME6-215ENST00000454531 RSF1Q96T23 1441 aaPredicted RBP29.37■■■□□ 2.29
NME6-215ENST00000454531 TOP2AP11388 1531 aaKnown RBP29.33■■■□□ 2.29
NME6-215ENST00000454531 ZNF608Q9ULD9 1512 aaPredicted RBP29.31■■■□□ 2.28
NME6-215ENST00000454531 ARHGEF11O15085 1522 aa29.26■■■□□ 2.27
NME6-215ENST00000454531 IFT140Q96RY7 1462 aa29.23■■■□□ 2.27
NME6-215ENST00000454531 CYB5RLQ6IPT4 315 aa29.19■■■□□ 2.26
NME6-215ENST00000454531 PRDM2Q13029 1718 aa29.17■■■□□ 2.26
NME6-215ENST00000454531 TOPBP1Q92547 1522 aa29.11■■■□□ 2.25
NME6-215ENST00000454531 CCDC88BA6NC98 1476 aa29.09■■■□□ 2.25
NME6-215ENST00000454531 TRHP20396 242 aaPredicted RBP29.04■■■□□ 2.24
NME6-215ENST00000454531 EIF4G3O43432 1585 aaKnown RBP29.03■■■□□ 2.24
NME6-215ENST00000454531 AQRO60306 1485 aaKnown RBP eCLIP28.98■■■□□ 2.232e-6■■■□□ 18.3
NME6-215ENST00000454531 ABCC8Q09428 1581 aa28.96■■■□□ 2.23
NME6-215ENST00000454531 CHD1O14646 1710 aa28.95■■■□□ 2.23
NME6-215ENST00000454531 ARAP1Q96P48 1450 aa28.95■■■□□ 2.22
NME6-215ENST00000454531 FBLN2P98095 1184 aa28.94■■■□□ 2.22
NME6-215ENST00000454531 DNMBPQ6XZF7 1577 aa28.91■■■□□ 2.22
NME6-215ENST00000454531 TARBP1Q13395 1621 aaKnown RBP28.89■■■□□ 2.22
NME6-215ENST00000454531 POLA1P09884 1462 aaPredicted RBP28.77■■■□□ 2.2
NME6-215ENST00000454531 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
NME6-215ENST00000454531 TDRD9Q8NDG6 1382 aaKnown RBP28.72■■■□□ 2.19
NME6-215ENST00000454531 SOGA1O94964 1423 aa28.67■■■□□ 2.18
NME6-215ENST00000454531 SNAPC4Q5SXM2 1469 aa28.61■■■□□ 2.17
NME6-215ENST00000454531 CLASP1Q7Z460 1538 aa28.6■■■□□ 2.17
NME6-215ENST00000454531 AEBP2Q6ZN18 517 aaPredicted RBP28.6■■■□□ 2.17
NME6-215ENST00000454531 CHMP7Q8WUX9 453 aaPredicted RBP28.6■■■□□ 2.17
NME6-215ENST00000454531 FGD5Q6ZNL6 1462 aa28.51■■■□□ 2.15
NME6-215ENST00000454531 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
NME6-215ENST00000454531 MAGI1Q96QZ7 1491 aaPredicted RBP28.46■■■□□ 2.15
NME6-215ENST00000454531 WDR97A6NE52 1622 aa28.45■■■□□ 2.14
NME6-215ENST00000454531 GRIN2BQ13224 1484 aa28.43■■■□□ 2.14
NME6-215ENST00000454531 CUX1P39880 1505 aa28.41■■■□□ 2.14
NME6-215ENST00000454531 SYNJ2O15056 1496 aa28.4■■■□□ 2.14
NME6-215ENST00000454531 GAPVD1Q14C86 1478 aa28.36■■■□□ 2.13
NME6-215ENST00000454531 PBRM1Q86U86 1689 aa28.26■■■□□ 2.12
NME6-215ENST00000454531 ERCC6L2Q5T890 1561 aa28.19■■■□□ 2.1
NME6-215ENST00000454531 ABCA10Q8WWZ4 1543 aa28.13■■■□□ 2.09
NME6-215ENST00000454531 ABCA5Q8WWZ7 1642 aa28.12■■■□□ 2.09
NME6-215ENST00000454531 GRIN2AQ12879 1464 aa28.07■■■□□ 2.08
NME6-215ENST00000454531 CEP170Q5SW79 1584 aa28.04■■■□□ 2.08
NME6-215ENST00000454531 NUP160Q12769 1436 aa28.01■■■□□ 2.07
NME6-215ENST00000454531 ADAMTS12P58397 1594 aa27.94■■■□□ 2.06
NME6-215ENST00000454531 SHROOM2Q13796 1616 aa27.92■■■□□ 2.06
NME6-215ENST00000454531 KIF13AQ9H1H9 1805 aa27.92■■■□□ 2.06
NME6-215ENST00000454531 WRNQ14191 1432 aaPredicted RBP eCLIP27.91■■■□□ 2.06
NME6-215ENST00000454531 FHAD1B1AJZ9 1412 aa27.88■■■□□ 2.05
NME6-215ENST00000454531 PRG4Q92954 1404 aaPredicted RBP27.82■■■□□ 2.04
NME6-215ENST00000454531 JPH4Q96JJ6 628 aa27.81■■■□□ 2.04
NME6-215ENST00000454531 FAM69CQ0P6D2 419 aa27.78■■■□□ 2.04
NME6-215ENST00000454531 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
NME6-215ENST00000454531 BIVM-ERCC5R4GMW8 1640 aa27.74■■■□□ 2.03
NME6-215ENST00000454531 ERICH3Q5RHP9 1530 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms