RNA–Protein interactions for RNA: ENST00000454499.5

TMPRSS2-204, Transcript of transmembrane serine protease 2, humanhuman

TSL 1 (best)

Gene TMPRSS2, Length 1,901 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS2-204ENST00000454499 NISCHQ9Y2I1 1504 aa29.24■■■□□ 2.27
TMPRSS2-204ENST00000454499 ABCC9O60706 1549 aa26.51■■□□□ 1.83
TMPRSS2-204ENST00000454499 CCDC180Q9P1Z9 1646 aa26.33■■□□□ 1.81
TMPRSS2-204ENST00000454499 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
TMPRSS2-204ENST00000454499 DNAJC5BQ9UF47 199 aa25.14■■□□□ 1.61
TMPRSS2-204ENST00000454499 NACADO15069 1562 aa24.93■■□□□ 1.58
TMPRSS2-204ENST00000454499 PABPN1Q86U42 306 aaKnown RBP eCLIP24.64■■□□□ 1.53
TMPRSS2-204ENST00000454499 UNC13AQ9UPW8 1703 aa24.63■■□□□ 1.53
TMPRSS2-204ENST00000454499 DCAF8L2P0C7V8 631 aa24.63■■□□□ 1.53
TMPRSS2-204ENST00000454499 MYO15BQ96JP2 1530 aa24.55■■□□□ 1.52
TMPRSS2-204ENST00000454499 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
TMPRSS2-204ENST00000454499 ZCCHC6Q5VYS8 1495 aaKnown RBP24.2■■□□□ 1.46
TMPRSS2-204ENST00000454499 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
TMPRSS2-204ENST00000454499 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
TMPRSS2-204ENST00000454499 CC2D2AQ9P2K1 1620 aa23.96■■□□□ 1.43
TMPRSS2-204ENST00000454499 SCRIBQ14160 1630 aa23.95■■□□□ 1.42
TMPRSS2-204ENST00000454499 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
TMPRSS2-204ENST00000454499 EIF4G1Q04637 1599 aaKnown RBP23.87■■□□□ 1.41
TMPRSS2-204ENST00000454499 DNAJC5Q9H3Z4 198 aa23.19■■□□□ 1.3
TMPRSS2-204ENST00000454499 NCAPD3P42695 1498 aa23.04■■□□□ 1.28
TMPRSS2-204ENST00000454499 CUX2O14529 1486 aa22.95■■□□□ 1.26
TMPRSS2-204ENST00000454499 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
TMPRSS2-204ENST00000454499 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
TMPRSS2-204ENST00000454499 ERCC6Q03468 1493 aa22.86■■□□□ 1.25
TMPRSS2-204ENST00000454499 HMGXB3Q12766 1538 aa22.84■■□□□ 1.25
TMPRSS2-204ENST00000454499 SMARCA2P51531 1590 aa22.83■■□□□ 1.24
TMPRSS2-204ENST00000454499 NESP48681 1621 aa22.75■■□□□ 1.23
TMPRSS2-204ENST00000454499 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
TMPRSS2-204ENST00000454499 PEG3Q9GZU2 1588 aa22.66■■□□□ 1.22
TMPRSS2-204ENST00000454499 BAZ1BQ9UIG0 1483 aaKnown RBP22.66■■□□□ 1.22
TMPRSS2-204ENST00000454499 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.21
TMPRSS2-204ENST00000454499 MROH2BQ7Z745 1585 aa22.54■■□□□ 1.2
TMPRSS2-204ENST00000454499 LAMC3Q9Y6N6 1575 aa22.53■■□□□ 1.2
TMPRSS2-204ENST00000454499 KIF21AQ7Z4S6 1674 aa22.44■■□□□ 1.18
TMPRSS2-204ENST00000454499 PDS5BQ9NTI5 1447 aa22.37■■□□□ 1.17
TMPRSS2-204ENST00000454499 CADPSQ9ULU8 1353 aa22.3■■□□□ 1.16
TMPRSS2-204ENST00000454499 WIZO95785 1651 aa22.24■■□□□ 1.15
TMPRSS2-204ENST00000454499 MRC2Q9UBG0 1479 aa22.23■■□□□ 1.15
TMPRSS2-204ENST00000454499 WDR62O43379 1518 aa22.21■■□□□ 1.15
TMPRSS2-204ENST00000454499 CEP164Q9UPV0 1460 aa22.07■■□□□ 1.12
TMPRSS2-204ENST00000454499 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
TMPRSS2-204ENST00000454499 CFTRP13569 1480 aa22.03■■□□□ 1.12
TMPRSS2-204ENST00000454499 TRIM41Q8WV44 630 aa22■■□□□ 1.11
TMPRSS2-204ENST00000454499 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
TMPRSS2-204ENST00000454499 TOP2AP11388 1531 aaKnown RBP21.95■■□□□ 1.1
TMPRSS2-204ENST00000454499 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
TMPRSS2-204ENST00000454499 OSCARQ8IYS5 282 aa21.81■■□□□ 1.08
TMPRSS2-204ENST00000454499 PRDM2Q13029 1718 aa21.78■■□□□ 1.08
TMPRSS2-204ENST00000454499 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
TMPRSS2-204ENST00000454499 ZNF608Q9ULD9 1512 aaPredicted RBP21.68■■□□□ 1.06
TMPRSS2-204ENST00000454499 IFT140Q96RY7 1462 aa21.65■■□□□ 1.06
TMPRSS2-204ENST00000454499 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
TMPRSS2-204ENST00000454499 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
TMPRSS2-204ENST00000454499 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
TMPRSS2-204ENST00000454499 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
TMPRSS2-204ENST00000454499 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
TMPRSS2-204ENST00000454499 ARHGEF11O15085 1522 aa21.53■■□□□ 1.04
TMPRSS2-204ENST00000454499 DNMBPQ6XZF7 1577 aa21.52■■□□□ 1.04
TMPRSS2-204ENST00000454499 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
TMPRSS2-204ENST00000454499 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
TMPRSS2-204ENST00000454499 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.02
TMPRSS2-204ENST00000454499 CHD1O14646 1710 aa21.41■■□□□ 1.02
TMPRSS2-204ENST00000454499 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
TMPRSS2-204ENST00000454499 ARAP1Q96P48 1450 aa21.32■■□□□ 1
TMPRSS2-204ENST00000454499 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
TMPRSS2-204ENST00000454499 CYB5RLQ6IPT4 315 aa21.31■■□□□ 1
TMPRSS2-204ENST00000454499 SOGA1O94964 1423 aa21.25■□□□□ 0.99
TMPRSS2-204ENST00000454499 TDRD9Q8NDG6 1382 aaKnown RBP21.24■□□□□ 0.99
TMPRSS2-204ENST00000454499 FBLN2P98095 1184 aa21.23■□□□□ 0.99
TMPRSS2-204ENST00000454499 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
TMPRSS2-204ENST00000454499 WDR97A6NE52 1622 aa21.2■□□□□ 0.98
TMPRSS2-204ENST00000454499 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
TMPRSS2-204ENST00000454499 CLASP1Q7Z460 1538 aa21.2■□□□□ 0.98
TMPRSS2-204ENST00000454499 CUX1P39880 1505 aa21.19■□□□□ 0.98
TMPRSS2-204ENST00000454499 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
TMPRSS2-204ENST00000454499 GRIN2BQ13224 1484 aa21.1■□□□□ 0.97
TMPRSS2-204ENST00000454499 TRHP20396 242 aaPredicted RBP21.1■□□□□ 0.97
TMPRSS2-204ENST00000454499 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
TMPRSS2-204ENST00000454499 SYNJ2O15056 1496 aa21.06■□□□□ 0.96
TMPRSS2-204ENST00000454499 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
TMPRSS2-204ENST00000454499 PBRM1Q86U86 1689 aa21.02■□□□□ 0.96
TMPRSS2-204ENST00000454499 GAPVD1Q14C86 1478 aa20.99■□□□□ 0.95
TMPRSS2-204ENST00000454499 ABCA5Q8WWZ7 1642 aa20.97■□□□□ 0.95
TMPRSS2-204ENST00000454499 ABCA10Q8WWZ4 1543 aa20.97■□□□□ 0.95
TMPRSS2-204ENST00000454499 ERCC6L2Q5T890 1561 aa20.86■□□□□ 0.93
TMPRSS2-204ENST00000454499 GRIN2AQ12879 1464 aa20.85■□□□□ 0.93
TMPRSS2-204ENST00000454499 ADAMTS12P58397 1594 aa20.83■□□□□ 0.92
TMPRSS2-204ENST00000454499 NUP160Q12769 1436 aa20.81■□□□□ 0.92
TMPRSS2-204ENST00000454499 CEP170Q5SW79 1584 aa20.81■□□□□ 0.92
TMPRSS2-204ENST00000454499 WRNQ14191 1432 aaPredicted RBP eCLIP20.8■□□□□ 0.92
TMPRSS2-204ENST00000454499 BIVM-ERCC5R4GMW8 1640 aa20.79■□□□□ 0.92
TMPRSS2-204ENST00000454499 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
TMPRSS2-204ENST00000454499 SHROOM2Q13796 1616 aa20.76■□□□□ 0.91
TMPRSS2-204ENST00000454499 SUPT5HO00267 1087 aaKnown RBP20.74■□□□□ 0.91
TMPRSS2-204ENST00000454499 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
TMPRSS2-204ENST00000454499 ERICH3Q5RHP9 1530 aa20.69■□□□□ 0.9
TMPRSS2-204ENST00000454499 AEBP2Q6ZN18 517 aaPredicted RBP20.61■□□□□ 0.89
TMPRSS2-204ENST00000454499 KIF13AQ9H1H9 1805 aa20.59■□□□□ 0.89
TMPRSS2-204ENST00000454499 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.89
TMPRSS2-204ENST00000454499 RUSC2Q8N2Y8 1516 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms