RNA–Protein interactions for RNA: ENST00000454308.5

GARS-203, Transcript of glycyl-tRNA synthetase, humanhuman

TSL 5

Gene GARS, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARS-203ENST00000454308 NISCHQ9Y2I1 1504 aa48.36■■■■■ 5.33
GARS-203ENST00000454308 CCDC180Q9P1Z9 1646 aa43.08■■■■■ 4.49
GARS-203ENST00000454308 ABCC9O60706 1549 aa42.66■■■■■ 4.42
GARS-203ENST00000454308 RB1CC1Q8TDY2 1594 aa40.72■■■■■ 4.11
GARS-203ENST00000454308 NACADO15069 1562 aa40.57■■■■■ 4.09
GARS-203ENST00000454308 DCAF8L2P0C7V8 631 aa40.55■■■■■ 4.08
GARS-203ENST00000454308 ZCCHC6Q5VYS8 1495 aaKnown RBP40.22■■■■■ 4.03
GARS-203ENST00000454308 MYO15BQ96JP2 1530 aa40.16■■■■■ 4.02
GARS-203ENST00000454308 UNC13AQ9UPW8 1703 aa39.93■■■■□ 3.98
GARS-203ENST00000454308 DCAF1Q9Y4B6 1507 aa39.9■■■■□ 3.98
GARS-203ENST00000454308 PABPN1Q86U42 306 aaKnown RBP eCLIP39.83■■■■□ 3.97
GARS-203ENST00000454308 BICRAQ9NZM4 1560 aa39.66■■■■□ 3.94
GARS-203ENST00000454308 DNAJC5BQ9UF47 199 aa39.59■■■■□ 3.93
GARS-203ENST00000454308 SCRIBQ14160 1630 aa39.43■■■■□ 3.9
GARS-203ENST00000454308 SHROOM4Q9ULL8 1493 aa38.97■■■■□ 3.83
GARS-203ENST00000454308 EIF4G1Q04637 1599 aaKnown RBP38.58■■■■□ 3.77
GARS-203ENST00000454308 CC2D2AQ9P2K1 1620 aa38.53■■■■□ 3.76
GARS-203ENST00000454308 CECR2Q9BXF3 1484 aa38.31■■■■□ 3.72
GARS-203ENST00000454308 SMARCA4P51532 1647 aa37.61■■■■□ 3.61
GARS-203ENST00000454308 ATAD2BQ9ULI0 1458 aa37.51■■■■□ 3.59
GARS-203ENST00000454308 NCAPD3P42695 1498 aa37.48■■■■□ 3.59
GARS-203ENST00000454308 BAZ1AQ9NRL2 1556 aaPredicted RBP37.44■■■■□ 3.58
GARS-203ENST00000454308 SMARCA2P51531 1590 aa37.34■■■■□ 3.57
GARS-203ENST00000454308 MROH2BQ7Z745 1585 aa37.34■■■■□ 3.57
GARS-203ENST00000454308 HMGXB3Q12766 1538 aa37.26■■■■□ 3.55
GARS-203ENST00000454308 PEG3Q9GZU2 1588 aa37.2■■■■□ 3.55
GARS-203ENST00000454308 BAZ1BQ9UIG0 1483 aaKnown RBP37.13■■■■□ 3.54
GARS-203ENST00000454308 WIZO95785 1651 aa36.91■■■■□ 3.5
GARS-203ENST00000454308 NESP48681 1621 aa36.85■■■■□ 3.49
GARS-203ENST00000454308 RSF1Q96T23 1441 aaPredicted RBP36.74■■■■□ 3.47
GARS-203ENST00000454308 ERCC6Q03468 1493 aa36.69■■■■□ 3.46
GARS-203ENST00000454308 LAMC3Q9Y6N6 1575 aa36.53■■■■□ 3.44
GARS-203ENST00000454308 TOP2AP11388 1531 aaKnown RBP36.43■■■■□ 3.42
GARS-203ENST00000454308 CUX2O14529 1486 aa36.4■■■■□ 3.42
GARS-203ENST00000454308 CADPSQ9ULU8 1353 aa36.38■■■■□ 3.41
GARS-203ENST00000454308 KIF21AQ7Z4S6 1674 aa36.35■■■■□ 3.41
GARS-203ENST00000454308 THOC2Q8NI27 1593 aaKnown RBP36.32■■■■□ 3.4
GARS-203ENST00000454308 PDS5BQ9NTI5 1447 aa36.26■■■■□ 3.4
GARS-203ENST00000454308 CFTRP13569 1480 aa36.1■■■■□ 3.37
GARS-203ENST00000454308 CCDC88BA6NC98 1476 aa36.04■■■■□ 3.36
GARS-203ENST00000454308 FANCD2Q9BXW9 1451 aa35.99■■■■□ 3.35
GARS-203ENST00000454308 MRC2Q9UBG0 1479 aa35.99■■■■□ 3.35
GARS-203ENST00000454308 CEP164Q9UPV0 1460 aa35.95■■■■□ 3.35
GARS-203ENST00000454308 WDR62O43379 1518 aa35.91■■■■□ 3.34
GARS-203ENST00000454308 DNAJC5Q9H3Z4 198 aa35.77■■■■□ 3.32
GARS-203ENST00000454308 PRDM2Q13029 1718 aa35.75■■■■□ 3.31
GARS-203ENST00000454308 URB2Q14146 1524 aaKnown RBP35.73■■■■□ 3.31
GARS-203ENST00000454308 SUPT5HO00267 1087 aaKnown RBP35.53■■■■□ 3.28
GARS-203ENST00000454308 TOPBP1Q92547 1522 aa35.4■■■■□ 3.26
GARS-203ENST00000454308 DNMBPQ6XZF7 1577 aa35.29■■■■□ 3.24
GARS-203ENST00000454308 ZNF608Q9ULD9 1512 aaPredicted RBP35.22■■■■□ 3.23
GARS-203ENST00000454308 IFT140Q96RY7 1462 aa35.2■■■■□ 3.23
GARS-203ENST00000454308 ABCC8Q09428 1581 aa35.2■■■■□ 3.23
GARS-203ENST00000454308 POLA1P09884 1462 aaPredicted RBP35.08■■■■□ 3.21
GARS-203ENST00000454308 TARBP1Q13395 1621 aaKnown RBP35.06■■■■□ 3.2
GARS-203ENST00000454308 CUX1P39880 1505 aa35.04■■■■□ 3.2
GARS-203ENST00000454308 EIF4G3O43432 1585 aaKnown RBP35■■■■□ 3.19
GARS-203ENST00000454308 RAD54L2Q9Y4B4 1467 aa34.99■■■■□ 3.19
GARS-203ENST00000454308 FGD5Q6ZNL6 1462 aa34.95■■■■□ 3.19
GARS-203ENST00000454308 AQRO60306 1485 aaKnown RBP eCLIP34.93■■■■□ 3.182e-8■■■■□ 21.1
GARS-203ENST00000454308 SOGA1O94964 1423 aa34.88■■■■□ 3.17
GARS-203ENST00000454308 OSCARQ8IYS5 282 aa34.81■■■■□ 3.16
GARS-203ENST00000454308 TDRD9Q8NDG6 1382 aaKnown RBP34.8■■■■□ 3.16
GARS-203ENST00000454308 WDR97A6NE52 1622 aa34.68■■■■□ 3.14
GARS-203ENST00000454308 CHD1O14646 1710 aa34.64■■■■□ 3.14
GARS-203ENST00000454308 SYNJ1O43426 1573 aa34.63■■■■□ 3.13
GARS-203ENST00000454308 SNAPC4Q5SXM2 1469 aa34.59■■■■□ 3.13
GARS-203ENST00000454308 WRNQ14191 1432 aaPredicted RBP eCLIP34.59■■■■□ 3.13
GARS-203ENST00000454308 BIVM-ERCC5R4GMW8 1640 aa34.57■■■■□ 3.12
GARS-203ENST00000454308 TOP2BQ02880 1626 aa34.56■■■■□ 3.12
GARS-203ENST00000454308 ABCA10Q8WWZ4 1543 aa34.55■■■■□ 3.12
GARS-203ENST00000454308 FBLN2P98095 1184 aa34.51■■■■□ 3.12
GARS-203ENST00000454308 TRIM41Q8WV44 630 aa34.5■■■■□ 3.11
GARS-203ENST00000454308 GRIN2BQ13224 1484 aa34.5■■■■□ 3.11
GARS-203ENST00000454308 ABCA5Q8WWZ7 1642 aa34.48■■■■□ 3.11
GARS-203ENST00000454308 GAPVD1Q14C86 1478 aa34.47■■■■□ 3.11
GARS-203ENST00000454308 PBRM1Q86U86 1689 aa34.45■■■■□ 3.11
GARS-203ENST00000454308 MAGI1Q96QZ7 1491 aaPredicted RBP34.43■■■■□ 3.1
GARS-203ENST00000454308 RIMBP3CA6NJZ7 1639 aa34.43■■■■□ 3.1
GARS-203ENST00000454308 RIMBP3BA6NNM3 1639 aa34.43■■■■□ 3.1
GARS-203ENST00000454308 RIMBP3Q9UFD9 1639 aa34.43■■■■□ 3.1
GARS-203ENST00000454308 ARHGEF11O15085 1522 aa34.36■■■■□ 3.09
GARS-203ENST00000454308 SYNJ2O15056 1496 aa34.33■■■■□ 3.09
GARS-203ENST00000454308 CHMP7Q8WUX9 453 aaPredicted RBP34.31■■■■□ 3.08
GARS-203ENST00000454308 CLASP1Q7Z460 1538 aa34.25■■■■□ 3.07
GARS-203ENST00000454308 ADAMTS12P58397 1594 aa34.19■■■■□ 3.06
GARS-203ENST00000454308 ARAP1Q96P48 1450 aa34.11■■■■□ 3.05
GARS-203ENST00000454308 GRIN2AQ12879 1464 aa34.08■■■■□ 3.05
GARS-203ENST00000454308 ERICH3Q5RHP9 1530 aa34.08■■■■□ 3.05
GARS-203ENST00000454308 CYB5RLQ6IPT4 315 aa34.04■■■■□ 3.04
GARS-203ENST00000454308 FHAD1B1AJZ9 1412 aa34.04■■■■□ 3.04
GARS-203ENST00000454308 CEP170Q5SW79 1584 aa34.01■■■■□ 3.03
GARS-203ENST00000454308 NUP160Q12769 1436 aa33.96■■■■□ 3.03
GARS-203ENST00000454308 ERCC6L2Q5T890 1561 aa33.86■■■■□ 3.01
GARS-203ENST00000454308 KIF27Q86VH2 1401 aa33.85■■■■□ 3.01
GARS-203ENST00000454308 IGF1RP08069 1367 aa33.84■■■■□ 3.01
GARS-203ENST00000454308 SHROOM2Q13796 1616 aa33.75■■■□□ 2.99
GARS-203ENST00000454308 RUSC2Q8N2Y8 1516 aa33.69■■■□□ 2.98
GARS-203ENST00000454308 CUL7Q14999 1698 aa33.68■■■□□ 2.98
GARS-203ENST00000454308 CARMIL1Q5VZK9 1371 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms