RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 NISCHQ9Y2I1 1504 aa26.52■■□□□ 1.84
LMCD1-205ENST00000454244 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
LMCD1-205ENST00000454244 ABCC9O60706 1549 aa23.49■■□□□ 1.35
LMCD1-205ENST00000454244 RB1CC1Q8TDY2 1594 aa22.41■■□□□ 1.18
LMCD1-205ENST00000454244 DCAF8L2P0C7V8 631 aa22.37■■□□□ 1.17
LMCD1-205ENST00000454244 NACADO15069 1562 aa22.32■■□□□ 1.16
LMCD1-205ENST00000454244 MYO15BQ96JP2 1530 aa22.09■■□□□ 1.13
LMCD1-205ENST00000454244 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
LMCD1-205ENST00000454244 PABPN1Q86U42 306 aaKnown RBP eCLIP21.94■■□□□ 1.1
LMCD1-205ENST00000454244 DCAF1Q9Y4B6 1507 aa21.9■■□□□ 1.1
LMCD1-205ENST00000454244 DNAJC5BQ9UF47 199 aa21.83■■□□□ 1.09
LMCD1-205ENST00000454244 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
LMCD1-205ENST00000454244 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
LMCD1-205ENST00000454244 SCRIBQ14160 1630 aa21.59■■□□□ 1.05
LMCD1-205ENST00000454244 SHROOM4Q9ULL8 1493 aa21.47■■□□□ 1.03
LMCD1-205ENST00000454244 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
LMCD1-205ENST00000454244 CC2D2AQ9P2K1 1620 aa21.17■□□□□ 0.98
LMCD1-205ENST00000454244 CECR2Q9BXF3 1484 aa21.12■□□□□ 0.97
LMCD1-205ENST00000454244 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
LMCD1-205ENST00000454244 ATAD2BQ9ULI0 1458 aa20.62■□□□□ 0.89
LMCD1-205ENST00000454244 SMARCA4P51532 1647 aa20.61■□□□□ 0.89
LMCD1-205ENST00000454244 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
LMCD1-205ENST00000454244 SMARCA2P51531 1590 aa20.54■□□□□ 0.88
LMCD1-205ENST00000454244 HMGXB3Q12766 1538 aa20.47■□□□□ 0.87
LMCD1-205ENST00000454244 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
LMCD1-205ENST00000454244 BAZ1BQ9UIG0 1483 aaKnown RBP20.42■□□□□ 0.86
LMCD1-205ENST00000454244 PEG3Q9GZU2 1588 aa20.39■□□□□ 0.85
LMCD1-205ENST00000454244 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
LMCD1-205ENST00000454244 NESP48681 1621 aa20.24■□□□□ 0.83
LMCD1-205ENST00000454244 WIZO95785 1651 aa20.18■□□□□ 0.82
LMCD1-205ENST00000454244 RSF1Q96T23 1441 aaPredicted RBP20.14■□□□□ 0.81
LMCD1-205ENST00000454244 CUX2O14529 1486 aa20.11■□□□□ 0.81
LMCD1-205ENST00000454244 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
LMCD1-205ENST00000454244 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
LMCD1-205ENST00000454244 PDS5BQ9NTI5 1447 aa20.02■□□□□ 0.79
LMCD1-205ENST00000454244 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
LMCD1-205ENST00000454244 THOC2Q8NI27 1593 aaKnown RBP19.92■□□□□ 0.78
LMCD1-205ENST00000454244 KIF21AQ7Z4S6 1674 aa19.9■□□□□ 0.78
LMCD1-205ENST00000454244 DNAJC5Q9H3Z4 198 aa19.85■□□□□ 0.77
LMCD1-205ENST00000454244 CFTRP13569 1480 aa19.84■□□□□ 0.77
LMCD1-205ENST00000454244 MRC2Q9UBG0 1479 aa19.81■□□□□ 0.76
LMCD1-205ENST00000454244 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
LMCD1-205ENST00000454244 CEP164Q9UPV0 1460 aa19.79■□□□□ 0.76
LMCD1-205ENST00000454244 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
LMCD1-205ENST00000454244 WDR62O43379 1518 aa19.73■□□□□ 0.75
LMCD1-205ENST00000454244 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
LMCD1-205ENST00000454244 PRDM2Q13029 1718 aa19.53■□□□□ 0.72
LMCD1-205ENST00000454244 SUPT5HO00267 1087 aaKnown RBP19.49■□□□□ 0.71
LMCD1-205ENST00000454244 TOPBP1Q92547 1522 aa19.44■□□□□ 0.7
LMCD1-205ENST00000454244 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
LMCD1-205ENST00000454244 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
LMCD1-205ENST00000454244 DNMBPQ6XZF7 1577 aa19.37■□□□□ 0.69
LMCD1-205ENST00000454244 ZNF608Q9ULD9 1512 aaPredicted RBP19.34■□□□□ 0.69
LMCD1-205ENST00000454244 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
LMCD1-205ENST00000454244 POLA1P09884 1462 aaPredicted RBP19.26■□□□□ 0.67
LMCD1-205ENST00000454244 TARBP1Q13395 1621 aaKnown RBP19.21■□□□□ 0.67
LMCD1-205ENST00000454244 AQRO60306 1485 aaKnown RBP eCLIP19.21■□□□□ 0.67
LMCD1-205ENST00000454244 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
LMCD1-205ENST00000454244 SOGA1O94964 1423 aa19.2■□□□□ 0.66
LMCD1-205ENST00000454244 CUX1P39880 1505 aa19.2■□□□□ 0.66
LMCD1-205ENST00000454244 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
LMCD1-205ENST00000454244 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
LMCD1-205ENST00000454244 TDRD9Q8NDG6 1382 aaKnown RBP19.15■□□□□ 0.66
LMCD1-205ENST00000454244 TRIM41Q8WV44 630 aa19.12■□□□□ 0.65
LMCD1-205ENST00000454244 FBLN2P98095 1184 aa19.07■□□□□ 0.64
LMCD1-205ENST00000454244 WDR97A6NE52 1622 aa19.01■□□□□ 0.63
LMCD1-205ENST00000454244 SNAPC4Q5SXM2 1469 aa19.01■□□□□ 0.63
LMCD1-205ENST00000454244 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
LMCD1-205ENST00000454244 GRIN2BQ13224 1484 aa18.99■□□□□ 0.63
LMCD1-205ENST00000454244 ABCA10Q8WWZ4 1543 aa18.97■□□□□ 0.63
LMCD1-205ENST00000454244 CHD1O14646 1710 aa18.97■□□□□ 0.63
LMCD1-205ENST00000454244 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
LMCD1-205ENST00000454244 CHMP7Q8WUX9 453 aaPredicted RBP18.95■□□□□ 0.62
LMCD1-205ENST00000454244 MAGI1Q96QZ7 1491 aaPredicted RBP18.95■□□□□ 0.62
LMCD1-205ENST00000454244 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
LMCD1-205ENST00000454244 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
LMCD1-205ENST00000454244 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
LMCD1-205ENST00000454244 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
LMCD1-205ENST00000454244 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
LMCD1-205ENST00000454244 SYNJ1O43426 1573 aa18.92■□□□□ 0.62
LMCD1-205ENST00000454244 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
LMCD1-205ENST00000454244 SYNJ2O15056 1496 aa18.89■□□□□ 0.61
LMCD1-205ENST00000454244 ABCA5Q8WWZ7 1642 aa18.88■□□□□ 0.61
LMCD1-205ENST00000454244 PBRM1Q86U86 1689 aa18.84■□□□□ 0.61
LMCD1-205ENST00000454244 CYB5RLQ6IPT4 315 aa18.82■□□□□ 0.6
LMCD1-205ENST00000454244 CLASP1Q7Z460 1538 aa18.8■□□□□ 0.6
LMCD1-205ENST00000454244 ARAP1Q96P48 1450 aa18.77■□□□□ 0.59
LMCD1-205ENST00000454244 ADAMTS12P58397 1594 aa18.74■□□□□ 0.59
LMCD1-205ENST00000454244 GRIN2AQ12879 1464 aa18.74■□□□□ 0.59
LMCD1-205ENST00000454244 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
LMCD1-205ENST00000454244 ERICH3Q5RHP9 1530 aa18.72■□□□□ 0.59
LMCD1-205ENST00000454244 NUP160Q12769 1436 aa18.67■□□□□ 0.58
LMCD1-205ENST00000454244 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
LMCD1-205ENST00000454244 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
LMCD1-205ENST00000454244 IGF1RP08069 1367 aa18.59■□□□□ 0.57
LMCD1-205ENST00000454244 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
LMCD1-205ENST00000454244 TRHP20396 242 aaPredicted RBP18.54■□□□□ 0.56
LMCD1-205ENST00000454244 JPH4Q96JJ6 628 aa18.52■□□□□ 0.56
LMCD1-205ENST00000454244 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
LMCD1-205ENST00000454244 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms