RNA–Protein interactions for RNA: ENST00000454199.1

SNX7-202, Transcript of sorting nexin 7, humanhuman

TSL 4

Gene SNX7, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-202ENST00000454199 NISCHQ9Y2I1 1504 aa27.55■■■□□ 2
SNX7-202ENST00000454199 ABCC9O60706 1549 aa24.96■■□□□ 1.59
SNX7-202ENST00000454199 CCDC180Q9P1Z9 1646 aa24.77■■□□□ 1.56
SNX7-202ENST00000454199 RB1CC1Q8TDY2 1594 aa23.62■■□□□ 1.37
SNX7-202ENST00000454199 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
SNX7-202ENST00000454199 NACADO15069 1562 aa23.41■■□□□ 1.34
SNX7-202ENST00000454199 DCAF8L2P0C7V8 631 aa23.31■■□□□ 1.32
SNX7-202ENST00000454199 UNC13AQ9UPW8 1703 aa23.23■■□□□ 1.31
SNX7-202ENST00000454199 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
SNX7-202ENST00000454199 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
SNX7-202ENST00000454199 MYO15BQ96JP2 1530 aa23■■□□□ 1.27
SNX7-202ENST00000454199 ZCCHC6Q5VYS8 1495 aaKnown RBP22.82■■□□□ 1.24
SNX7-202ENST00000454199 DCAF1Q9Y4B6 1507 aa22.68■■□□□ 1.22
SNX7-202ENST00000454199 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
SNX7-202ENST00000454199 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
SNX7-202ENST00000454199 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
SNX7-202ENST00000454199 CECR2Q9BXF3 1484 aa22.45■■□□□ 1.18
SNX7-202ENST00000454199 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
SNX7-202ENST00000454199 DNAJC5Q9H3Z4 198 aa21.62■■□□□ 1.05
SNX7-202ENST00000454199 NCAPD3P42695 1498 aa21.61■■□□□ 1.05
SNX7-202ENST00000454199 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.04
SNX7-202ENST00000454199 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
SNX7-202ENST00000454199 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
SNX7-202ENST00000454199 CUX2O14529 1486 aa21.47■■□□□ 1.03
SNX7-202ENST00000454199 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
SNX7-202ENST00000454199 HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
SNX7-202ENST00000454199 NESP48681 1621 aa21.44■■□□□ 1.02
SNX7-202ENST00000454199 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
SNX7-202ENST00000454199 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
SNX7-202ENST00000454199 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
SNX7-202ENST00000454199 MROH2BQ7Z745 1585 aa21.28■■□□□ 1
SNX7-202ENST00000454199 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
SNX7-202ENST00000454199 KIF21AQ7Z4S6 1674 aa21.17■□□□□ 0.98
SNX7-202ENST00000454199 LAMC3Q9Y6N6 1575 aa21.16■□□□□ 0.98
SNX7-202ENST00000454199 WIZO95785 1651 aa21.05■□□□□ 0.96
SNX7-202ENST00000454199 PDS5BQ9NTI5 1447 aa21.01■□□□□ 0.95
SNX7-202ENST00000454199 CADPSQ9ULU8 1353 aa20.96■□□□□ 0.95
SNX7-202ENST00000454199 MRC2Q9UBG0 1479 aa20.89■□□□□ 0.94
SNX7-202ENST00000454199 WDR62O43379 1518 aa20.86■□□□□ 0.93
SNX7-202ENST00000454199 CEP164Q9UPV0 1460 aa20.78■□□□□ 0.92
SNX7-202ENST00000454199 FANCD2Q9BXW9 1451 aa20.75■□□□□ 0.91
SNX7-202ENST00000454199 RSF1Q96T23 1441 aaPredicted RBP20.75■□□□□ 0.91
SNX7-202ENST00000454199 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
SNX7-202ENST00000454199 CFTRP13569 1480 aa20.7■□□□□ 0.9
SNX7-202ENST00000454199 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
SNX7-202ENST00000454199 URB2Q14146 1524 aaKnown RBP20.64■□□□□ 0.9
SNX7-202ENST00000454199 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
SNX7-202ENST00000454199 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
SNX7-202ENST00000454199 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
SNX7-202ENST00000454199 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
SNX7-202ENST00000454199 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
SNX7-202ENST00000454199 IFT140Q96RY7 1462 aa20.35■□□□□ 0.85
SNX7-202ENST00000454199 RIMBP3CA6NJZ7 1639 aa20.32■□□□□ 0.84
SNX7-202ENST00000454199 RIMBP3BA6NNM3 1639 aa20.32■□□□□ 0.84
SNX7-202ENST00000454199 RIMBP3Q9UFD9 1639 aa20.32■□□□□ 0.84
SNX7-202ENST00000454199 EIF4G3O43432 1585 aaKnown RBP20.29■□□□□ 0.84
SNX7-202ENST00000454199 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
SNX7-202ENST00000454199 TARBP1Q13395 1621 aaKnown RBP20.22■□□□□ 0.83
SNX7-202ENST00000454199 ARHGEF11O15085 1522 aa20.21■□□□□ 0.83
SNX7-202ENST00000454199 CHD1O14646 1710 aa20.2■□□□□ 0.82
SNX7-202ENST00000454199 ABCC8Q09428 1581 aa20.2■□□□□ 0.82
SNX7-202ENST00000454199 AQRO60306 1485 aaKnown RBP eCLIP20.19■□□□□ 0.82
SNX7-202ENST00000454199 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
SNX7-202ENST00000454199 RAD54L2Q9Y4B4 1467 aa20.12■□□□□ 0.81
SNX7-202ENST00000454199 FBLN2P98095 1184 aa20.05■□□□□ 0.8
SNX7-202ENST00000454199 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
SNX7-202ENST00000454199 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
SNX7-202ENST00000454199 ARAP1Q96P48 1450 aa20.02■□□□□ 0.8
SNX7-202ENST00000454199 SOGA1O94964 1423 aa20.02■□□□□ 0.79
SNX7-202ENST00000454199 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
SNX7-202ENST00000454199 CUX1P39880 1505 aa20.01■□□□□ 0.79
SNX7-202ENST00000454199 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
SNX7-202ENST00000454199 CLASP1Q7Z460 1538 aa19.92■□□□□ 0.78
SNX7-202ENST00000454199 WDR97A6NE52 1622 aa19.91■□□□□ 0.78
SNX7-202ENST00000454199 PBRM1Q86U86 1689 aa19.86■□□□□ 0.77
SNX7-202ENST00000454199 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
SNX7-202ENST00000454199 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
SNX7-202ENST00000454199 SYNJ1O43426 1573 aa19.84■□□□□ 0.77
SNX7-202ENST00000454199 TRHP20396 242 aaPredicted RBP19.84■□□□□ 0.77
SNX7-202ENST00000454199 CHMP7Q8WUX9 453 aaPredicted RBP19.83■□□□□ 0.77
SNX7-202ENST00000454199 SYNJ2O15056 1496 aa19.8■□□□□ 0.76
SNX7-202ENST00000454199 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
SNX7-202ENST00000454199 ABCA5Q8WWZ7 1642 aa19.77■□□□□ 0.76
SNX7-202ENST00000454199 SUPT5HO00267 1087 aaKnown RBP19.76■□□□□ 0.75
SNX7-202ENST00000454199 ABCA10Q8WWZ4 1543 aa19.74■□□□□ 0.75
SNX7-202ENST00000454199 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
SNX7-202ENST00000454199 ADAMTS12P58397 1594 aa19.64■□□□□ 0.73
SNX7-202ENST00000454199 BIVM-ERCC5R4GMW8 1640 aa19.63■□□□□ 0.73
SNX7-202ENST00000454199 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
SNX7-202ENST00000454199 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
SNX7-202ENST00000454199 TOP2BQ02880 1626 aa19.61■□□□□ 0.73
SNX7-202ENST00000454199 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
SNX7-202ENST00000454199 NUP160Q12769 1436 aa19.55■□□□□ 0.72
SNX7-202ENST00000454199 SHROOM2Q13796 1616 aa19.51■□□□□ 0.71
SNX7-202ENST00000454199 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
SNX7-202ENST00000454199 AEBP2Q6ZN18 517 aaPredicted RBP19.48■□□□□ 0.71
SNX7-202ENST00000454199 ERICH3Q5RHP9 1530 aa19.47■□□□□ 0.71
SNX7-202ENST00000454199 PRG4Q92954 1404 aaPredicted RBP19.38■□□□□ 0.69
SNX7-202ENST00000454199 KIF13AQ9H1H9 1805 aa19.37■□□□□ 0.69
SNX7-202ENST00000454199 RUSC2Q8N2Y8 1516 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms