RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 NISCHQ9Y2I1 1504 aa45.61■■■■■ 4.89
SEC22C-212ENST00000454141 CCDC180Q9P1Z9 1646 aa40.83■■■■■ 4.13
SEC22C-212ENST00000454141 ABCC9O60706 1549 aa40.61■■■■■ 4.09
SEC22C-212ENST00000454141 RB1CC1Q8TDY2 1594 aa38.77■■■■□ 3.8
SEC22C-212ENST00000454141 NACADO15069 1562 aa38.55■■■■□ 3.76
SEC22C-212ENST00000454141 DCAF8L2P0C7V8 631 aa38.34■■■■□ 3.73
SEC22C-212ENST00000454141 MYO15BQ96JP2 1530 aa38.12■■■■□ 3.69
SEC22C-212ENST00000454141 ZCCHC6Q5VYS8 1495 aaKnown RBP37.87■■■■□ 3.65
SEC22C-212ENST00000454141 DNAJC5BQ9UF47 199 aa37.84■■■■□ 3.65
SEC22C-212ENST00000454141 UNC13AQ9UPW8 1703 aa37.81■■■■□ 3.64
SEC22C-212ENST00000454141 PABPN1Q86U42 306 aaKnown RBP eCLIP37.81■■■■□ 3.64
SEC22C-212ENST00000454141 DCAF1Q9Y4B6 1507 aa37.71■■■■□ 3.63
SEC22C-212ENST00000454141 BICRAQ9NZM4 1560 aa37.61■■■■□ 3.61
SEC22C-212ENST00000454141 SCRIBQ14160 1630 aa37.22■■■■□ 3.55
SEC22C-212ENST00000454141 SHROOM4Q9ULL8 1493 aa37.19■■■■□ 3.54
SEC22C-212ENST00000454141 CC2D2AQ9P2K1 1620 aa36.69■■■■□ 3.46
SEC22C-212ENST00000454141 EIF4G1Q04637 1599 aaKnown RBP36.69■■■■□ 3.46
SEC22C-212ENST00000454141 CECR2Q9BXF3 1484 aa36.56■■■■□ 3.44
SEC22C-212ENST00000454141 NCAPD3P42695 1498 aa35.59■■■■□ 3.29
SEC22C-212ENST00000454141 SMARCA4P51532 1647 aa35.53■■■■□ 3.28
SEC22C-212ENST00000454141 ATAD2BQ9ULI0 1458 aa35.51■■■■□ 3.28
SEC22C-212ENST00000454141 SMARCA2P51531 1590 aa35.43■■■■□ 3.26
SEC22C-212ENST00000454141 BAZ1AQ9NRL2 1556 aaPredicted RBP35.4■■■■□ 3.26
SEC22C-212ENST00000454141 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
SEC22C-212ENST00000454141 PEG3Q9GZU2 1588 aa35.2■■■■□ 3.23
SEC22C-212ENST00000454141 BAZ1BQ9UIG0 1483 aaKnown RBP35.19■■■■□ 3.22
SEC22C-212ENST00000454141 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
SEC22C-212ENST00000454141 ERCC6Q03468 1493 aa35.06■■■■□ 3.2
SEC22C-212ENST00000454141 NESP48681 1621 aa34.94■■■■□ 3.18
SEC22C-212ENST00000454141 CUX2O14529 1486 aa34.93■■■■□ 3.18
SEC22C-212ENST00000454141 LAMC3Q9Y6N6 1575 aa34.76■■■■□ 3.16
SEC22C-212ENST00000454141 WIZO95785 1651 aa34.7■■■■□ 3.15
SEC22C-212ENST00000454141 DNAJC5Q9H3Z4 198 aa34.6■■■■□ 3.13
SEC22C-212ENST00000454141 THOC2Q8NI27 1593 aaKnown RBP34.57■■■■□ 3.12
SEC22C-212ENST00000454141 PDS5BQ9NTI5 1447 aa34.55■■■■□ 3.12
SEC22C-212ENST00000454141 CADPSQ9ULU8 1353 aa34.51■■■■□ 3.12
SEC22C-212ENST00000454141 RSF1Q96T23 1441 aaPredicted RBP34.5■■■■□ 3.11
SEC22C-212ENST00000454141 KIF21AQ7Z4S6 1674 aa34.48■■■■□ 3.11
SEC22C-212ENST00000454141 TOP2AP11388 1531 aaKnown RBP34.33■■■■□ 3.09
SEC22C-212ENST00000454141 MRC2Q9UBG0 1479 aa34.25■■■■□ 3.07
SEC22C-212ENST00000454141 CFTRP13569 1480 aa34.18■■■■□ 3.06
SEC22C-212ENST00000454141 CEP164Q9UPV0 1460 aa34.16■■■■□ 3.06
SEC22C-212ENST00000454141 WDR62O43379 1518 aa34.15■■■■□ 3.06
SEC22C-212ENST00000454141 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
SEC22C-212ENST00000454141 CCDC88BA6NC98 1476 aa33.91■■■■□ 3.02
SEC22C-212ENST00000454141 URB2Q14146 1524 aaKnown RBP33.84■■■■□ 3.01
SEC22C-212ENST00000454141 PRDM2Q13029 1718 aa33.8■■■■□ 3
SEC22C-212ENST00000454141 TOPBP1Q92547 1522 aa33.5■■■□□ 2.95
SEC22C-212ENST00000454141 IFT140Q96RY7 1462 aa33.46■■■□□ 2.95
SEC22C-212ENST00000454141 ABCC8Q09428 1581 aa33.45■■■□□ 2.95
SEC22C-212ENST00000454141 DNMBPQ6XZF7 1577 aa33.41■■■□□ 2.94
SEC22C-212ENST00000454141 ZNF608Q9ULD9 1512 aaPredicted RBP33.37■■■□□ 2.93
SEC22C-212ENST00000454141 OSCARQ8IYS5 282 aa33.33■■■□□ 2.93
SEC22C-212ENST00000454141 EIF4G3O43432 1585 aaKnown RBP33.21■■■□□ 2.91
SEC22C-212ENST00000454141 TRIM41Q8WV44 630 aa33.19■■■□□ 2.9
SEC22C-212ENST00000454141 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
SEC22C-212ENST00000454141 TARBP1Q13395 1621 aaKnown RBP33.18■■■□□ 2.9
SEC22C-212ENST00000454141 SUPT5HO00267 1087 aaKnown RBP33.1■■■□□ 2.89
SEC22C-212ENST00000454141 AQRO60306 1485 aaKnown RBP eCLIP33.08■■■□□ 2.89
SEC22C-212ENST00000454141 RAD54L2Q9Y4B4 1467 aa33.04■■■□□ 2.88
SEC22C-212ENST00000454141 SOGA1O94964 1423 aa33.02■■■□□ 2.88
SEC22C-212ENST00000454141 CUX1P39880 1505 aa33.01■■■□□ 2.87
SEC22C-212ENST00000454141 FGD5Q6ZNL6 1462 aa33■■■□□ 2.87
SEC22C-212ENST00000454141 TDRD9Q8NDG6 1382 aaKnown RBP32.92■■■□□ 2.86
SEC22C-212ENST00000454141 WDR97A6NE52 1622 aa32.89■■■□□ 2.86
SEC22C-212ENST00000454141 RIMBP3CA6NJZ7 1639 aa32.88■■■□□ 2.85
SEC22C-212ENST00000454141 RIMBP3BA6NNM3 1639 aa32.88■■■□□ 2.85
SEC22C-212ENST00000454141 RIMBP3Q9UFD9 1639 aa32.88■■■□□ 2.85
SEC22C-212ENST00000454141 CHD1O14646 1710 aa32.88■■■□□ 2.85
SEC22C-212ENST00000454141 ARHGEF11O15085 1522 aa32.83■■■□□ 2.85
SEC22C-212ENST00000454141 FBLN2P98095 1184 aa32.81■■■□□ 2.84
SEC22C-212ENST00000454141 SNAPC4Q5SXM2 1469 aa32.79■■■□□ 2.84
SEC22C-212ENST00000454141 GRIN2BQ13224 1484 aa32.74■■■□□ 2.83
SEC22C-212ENST00000454141 MAGI1Q96QZ7 1491 aaPredicted RBP32.71■■■□□ 2.83
SEC22C-212ENST00000454141 ABCA10Q8WWZ4 1543 aa32.65■■■□□ 2.82
SEC22C-212ENST00000454141 GAPVD1Q14C86 1478 aa32.64■■■□□ 2.82
SEC22C-212ENST00000454141 CHMP7Q8WUX9 453 aaPredicted RBP32.62■■■□□ 2.81
SEC22C-212ENST00000454141 SYNJ2O15056 1496 aa32.6■■■□□ 2.81
SEC22C-212ENST00000454141 PBRM1Q86U86 1689 aa32.58■■■□□ 2.81
SEC22C-212ENST00000454141 ABCA5Q8WWZ7 1642 aa32.58■■■□□ 2.81
SEC22C-212ENST00000454141 WRNQ14191 1432 aaPredicted RBP eCLIP32.56■■■□□ 2.8
SEC22C-212ENST00000454141 CLASP1Q7Z460 1538 aa32.56■■■□□ 2.8
SEC22C-212ENST00000454141 SYNJ1O43426 1573 aa32.55■■■□□ 2.8
SEC22C-212ENST00000454141 TOP2BQ02880 1626 aa32.54■■■□□ 2.8
SEC22C-212ENST00000454141 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
SEC22C-212ENST00000454141 CYB5RLQ6IPT4 315 aa32.53■■■□□ 2.8
SEC22C-212ENST00000454141 ARAP1Q96P48 1450 aa32.53■■■□□ 2.8
SEC22C-212ENST00000454141 ADAMTS12P58397 1594 aa32.32■■■□□ 2.77
SEC22C-212ENST00000454141 GRIN2AQ12879 1464 aa32.31■■■□□ 2.76
SEC22C-212ENST00000454141 ERICH3Q5RHP9 1530 aa32.25■■■□□ 2.75
SEC22C-212ENST00000454141 FHAD1B1AJZ9 1412 aa32.24■■■□□ 2.75
SEC22C-212ENST00000454141 NUP160Q12769 1436 aa32.19■■■□□ 2.74
SEC22C-212ENST00000454141 CEP170Q5SW79 1584 aa32.17■■■□□ 2.74
SEC22C-212ENST00000454141 TRHP20396 242 aaPredicted RBP32.1■■■□□ 2.73
SEC22C-212ENST00000454141 ERCC6L2Q5T890 1561 aa32.04■■■□□ 2.72
SEC22C-212ENST00000454141 SHROOM2Q13796 1616 aa32■■■□□ 2.71
SEC22C-212ENST00000454141 KIF27Q86VH2 1401 aa31.92■■■□□ 2.7
SEC22C-212ENST00000454141 RUSC2Q8N2Y8 1516 aa31.87■■■□□ 2.69
SEC22C-212ENST00000454141 IGF1RP08069 1367 aa31.86■■■□□ 2.69
SEC22C-212ENST00000454141 PRG4Q92954 1404 aaPredicted RBP31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms