RNA–Protein interactions for RNA: ENST00000454113.1

AC003666.1-201, humanhuman

TSL 3 BASIC

Gene AC003666.1, Length 611 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003666.1-201ENST00000454113 NISCHQ9Y2I1 1504 aa22.71■■□□□ 1.23
AC003666.1-201ENST00000454113 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
AC003666.1-201ENST00000454113 ABCC9O60706 1549 aa19.99■□□□□ 0.79
AC003666.1-201ENST00000454113 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
AC003666.1-201ENST00000454113 NACADO15069 1562 aa19.08■□□□□ 0.65
AC003666.1-201ENST00000454113 ZCCHC6Q5VYS8 1495 aaKnown RBP18.93■□□□□ 0.62
AC003666.1-201ENST00000454113 DCAF8L2P0C7V8 631 aa18.93■□□□□ 0.62
AC003666.1-201ENST00000454113 MYO15BQ96JP2 1530 aa18.89■□□□□ 0.61
AC003666.1-201ENST00000454113 UNC13AQ9UPW8 1703 aa18.86■□□□□ 0.61
AC003666.1-201ENST00000454113 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
AC003666.1-201ENST00000454113 BICRAQ9NZM4 1560 aa18.62■□□□□ 0.57
AC003666.1-201ENST00000454113 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
AC003666.1-201ENST00000454113 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
AC003666.1-201ENST00000454113 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.53
AC003666.1-201ENST00000454113 SHROOM4Q9ULL8 1493 aa18.36■□□□□ 0.53
AC003666.1-201ENST00000454113 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
AC003666.1-201ENST00000454113 CC2D2AQ9P2K1 1620 aa18.1■□□□□ 0.49
AC003666.1-201ENST00000454113 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
AC003666.1-201ENST00000454113 SMARCA4P51532 1647 aa17.71■□□□□ 0.43
AC003666.1-201ENST00000454113 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
AC003666.1-201ENST00000454113 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.41
AC003666.1-201ENST00000454113 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
AC003666.1-201ENST00000454113 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
AC003666.1-201ENST00000454113 HMGXB3Q12766 1538 aa17.54■□□□□ 0.4
AC003666.1-201ENST00000454113 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
AC003666.1-201ENST00000454113 PEG3Q9GZU2 1588 aa17.51■□□□□ 0.39
AC003666.1-201ENST00000454113 BAZ1BQ9UIG0 1483 aaKnown RBP17.45■□□□□ 0.38
AC003666.1-201ENST00000454113 WIZO95785 1651 aa17.37■□□□□ 0.37
AC003666.1-201ENST00000454113 NESP48681 1621 aa17.26■□□□□ 0.35
AC003666.1-201ENST00000454113 ERCC6Q03468 1493 aa17.23■□□□□ 0.35
AC003666.1-201ENST00000454113 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
AC003666.1-201ENST00000454113 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
AC003666.1-201ENST00000454113 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
AC003666.1-201ENST00000454113 KIF21AQ7Z4S6 1674 aa17.14■□□□□ 0.33
AC003666.1-201ENST00000454113 THOC2Q8NI27 1593 aaKnown RBP17.1■□□□□ 0.33
AC003666.1-201ENST00000454113 CUX2O14529 1486 aa17.08■□□□□ 0.32
AC003666.1-201ENST00000454113 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
AC003666.1-201ENST00000454113 PDS5BQ9NTI5 1447 aa17.01■□□□□ 0.31
AC003666.1-201ENST00000454113 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
AC003666.1-201ENST00000454113 CFTRP13569 1480 aa16.93■□□□□ 0.3
AC003666.1-201ENST00000454113 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
AC003666.1-201ENST00000454113 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
AC003666.1-201ENST00000454113 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
AC003666.1-201ENST00000454113 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
AC003666.1-201ENST00000454113 WDR62O43379 1518 aa16.88■□□□□ 0.29
AC003666.1-201ENST00000454113 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
AC003666.1-201ENST00000454113 SUPT5HO00267 1087 aaKnown RBP16.63■□□□□ 0.25
AC003666.1-201ENST00000454113 DNAJC5Q9H3Z4 198 aa16.63■□□□□ 0.25
AC003666.1-201ENST00000454113 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
AC003666.1-201ENST00000454113 DNMBPQ6XZF7 1577 aa16.61■□□□□ 0.25
AC003666.1-201ENST00000454113 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
AC003666.1-201ENST00000454113 IFT140Q96RY7 1462 aa16.53■□□□□ 0.24
AC003666.1-201ENST00000454113 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
AC003666.1-201ENST00000454113 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
AC003666.1-201ENST00000454113 TARBP1Q13395 1621 aaKnown RBP16.49■□□□□ 0.23
AC003666.1-201ENST00000454113 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
AC003666.1-201ENST00000454113 CUX1P39880 1505 aa16.46■□□□□ 0.23
AC003666.1-201ENST00000454113 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
AC003666.1-201ENST00000454113 RAD54L2Q9Y4B4 1467 aa16.39■□□□□ 0.21
AC003666.1-201ENST00000454113 WDR97A6NE52 1622 aa16.38■□□□□ 0.21
AC003666.1-201ENST00000454113 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.21
AC003666.1-201ENST00000454113 CHD1O14646 1710 aa16.34■□□□□ 0.21
AC003666.1-201ENST00000454113 SOGA1O94964 1423 aa16.34■□□□□ 0.21
AC003666.1-201ENST00000454113 BIVM-ERCC5R4GMW8 1640 aa16.32■□□□□ 0.2
AC003666.1-201ENST00000454113 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
AC003666.1-201ENST00000454113 PBRM1Q86U86 1689 aa16.29■□□□□ 0.2
AC003666.1-201ENST00000454113 TOP2BQ02880 1626 aa16.28■□□□□ 0.2
AC003666.1-201ENST00000454113 TDRD9Q8NDG6 1382 aaKnown RBP16.27■□□□□ 0.2
AC003666.1-201ENST00000454113 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
AC003666.1-201ENST00000454113 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
AC003666.1-201ENST00000454113 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
AC003666.1-201ENST00000454113 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
AC003666.1-201ENST00000454113 ABCA10Q8WWZ4 1543 aa16.23■□□□□ 0.19
AC003666.1-201ENST00000454113 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
AC003666.1-201ENST00000454113 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
AC003666.1-201ENST00000454113 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
AC003666.1-201ENST00000454113 RIMBP3CA6NJZ7 1639 aa16.18■□□□□ 0.18
AC003666.1-201ENST00000454113 RIMBP3BA6NNM3 1639 aa16.18■□□□□ 0.18
AC003666.1-201ENST00000454113 RIMBP3Q9UFD9 1639 aa16.18■□□□□ 0.18
AC003666.1-201ENST00000454113 FBLN2P98095 1184 aa16.13■□□□□ 0.17
AC003666.1-201ENST00000454113 ARHGEF11O15085 1522 aa16.12■□□□□ 0.17
AC003666.1-201ENST00000454113 SYNJ2O15056 1496 aa16.11■□□□□ 0.17
AC003666.1-201ENST00000454113 ADAMTS12P58397 1594 aa16.11■□□□□ 0.17
AC003666.1-201ENST00000454113 CLASP1Q7Z460 1538 aa16.1■□□□□ 0.17
AC003666.1-201ENST00000454113 TRIM41Q8WV44 630 aa16.09■□□□□ 0.17
AC003666.1-201ENST00000454113 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
AC003666.1-201ENST00000454113 ERICH3Q5RHP9 1530 aa16.04■□□□□ 0.16
AC003666.1-201ENST00000454113 GRIN2AQ12879 1464 aa16.02■□□□□ 0.15
AC003666.1-201ENST00000454113 ARAP1Q96P48 1450 aa15.99■□□□□ 0.15
AC003666.1-201ENST00000454113 CEP170Q5SW79 1584 aa15.99■□□□□ 0.15
AC003666.1-201ENST00000454113 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
AC003666.1-201ENST00000454113 NUP160Q12769 1436 aa15.94■□□□□ 0.14
AC003666.1-201ENST00000454113 CUL7Q14999 1698 aa15.92■□□□□ 0.14
AC003666.1-201ENST00000454113 KIF27Q86VH2 1401 aa15.9■□□□□ 0.14
AC003666.1-201ENST00000454113 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
AC003666.1-201ENST00000454113 SHROOM2Q13796 1616 aa15.89■□□□□ 0.13
AC003666.1-201ENST00000454113 ERCC6L2Q5T890 1561 aa15.88■□□□□ 0.13
AC003666.1-201ENST00000454113 CYB5RLQ6IPT4 315 aa15.86■□□□□ 0.13
AC003666.1-201ENST00000454113 IGF1RP08069 1367 aa15.82■□□□□ 0.12
AC003666.1-201ENST00000454113 CARMIL1Q5VZK9 1371 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms