RNA–Protein interactions for RNA: ENST00000454057.1

POLDIP3-206, Transcript of DNA polymerase delta interacting protein 3, humanhuman

TSL 4

Gene POLDIP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-206ENST00000454057 NISCHQ9Y2I1 1504 aa33.02■■■□□ 2.88
POLDIP3-206ENST00000454057 CCDC180Q9P1Z9 1646 aa28.82■■■□□ 2.2
POLDIP3-206ENST00000454057 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
POLDIP3-206ENST00000454057 DCAF1Q9Y4B6 1507 aa27.35■■□□□ 1.97
POLDIP3-206ENST00000454057 ABCC9O60706 1549 aa27.07■■□□□ 1.92
POLDIP3-206ENST00000454057 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
POLDIP3-206ENST00000454057 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
POLDIP3-206ENST00000454057 SHROOM4Q9ULL8 1493 aa26.83■■□□□ 1.89
POLDIP3-206ENST00000454057 NACADO15069 1562 aa26.78■■□□□ 1.88
POLDIP3-206ENST00000454057 RB1CC1Q8TDY2 1594 aa26.51■■□□□ 1.83
POLDIP3-206ENST00000454057 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
POLDIP3-206ENST00000454057 UNC13AQ9UPW8 1703 aa26.04■■□□□ 1.76
POLDIP3-206ENST00000454057 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
POLDIP3-206ENST00000454057 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
POLDIP3-206ENST00000454057 CECR2Q9BXF3 1484 aa25.63■■□□□ 1.69
POLDIP3-206ENST00000454057 RSF1Q96T23 1441 aaPredicted RBP25.62■■□□□ 1.69
POLDIP3-206ENST00000454057 MROH2BQ7Z745 1585 aa25.51■■□□□ 1.67
POLDIP3-206ENST00000454057 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
POLDIP3-206ENST00000454057 PABPN1Q86U42 306 aaKnown RBP eCLIP25.47■■□□□ 1.67
POLDIP3-206ENST00000454057 SMARCA4P51532 1647 aa25.39■■□□□ 1.66
POLDIP3-206ENST00000454057 WIZO95785 1651 aa25.29■■□□□ 1.64
POLDIP3-206ENST00000454057 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
POLDIP3-206ENST00000454057 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
POLDIP3-206ENST00000454057 EIF4G1Q04637 1599 aaKnown RBP24.95■■□□□ 1.58
POLDIP3-206ENST00000454057 ATAD2BQ9ULI0 1458 aa24.93■■□□□ 1.58
POLDIP3-206ENST00000454057 SMARCA2P51531 1590 aa24.91■■□□□ 1.58
POLDIP3-206ENST00000454057 CHIC1Q5VXU3 224 aa24.81■■□□□ 1.56
POLDIP3-206ENST00000454057 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
POLDIP3-206ENST00000454057 BAZ1BQ9UIG0 1483 aaKnown RBP24.76■■□□□ 1.55
POLDIP3-206ENST00000454057 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
POLDIP3-206ENST00000454057 NCAPD3P42695 1498 aa24.7■■□□□ 1.55
POLDIP3-206ENST00000454057 CC2D2AQ9P2K1 1620 aa24.55■■□□□ 1.52
POLDIP3-206ENST00000454057 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
POLDIP3-206ENST00000454057 TRIM41Q8WV44 630 aa24.26■■□□□ 1.47
POLDIP3-206ENST00000454057 CFTRP13569 1480 aa24.17■■□□□ 1.46
POLDIP3-206ENST00000454057 PRDM2Q13029 1718 aa24.11■■□□□ 1.45
POLDIP3-206ENST00000454057 WRNQ14191 1432 aaPredicted RBP eCLIP24.08■■□□□ 1.44
POLDIP3-206ENST00000454057 SYNJ1O43426 1573 aa24.04■■□□□ 1.44
POLDIP3-206ENST00000454057 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
POLDIP3-206ENST00000454057 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.42
POLDIP3-206ENST00000454057 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
POLDIP3-206ENST00000454057 CUX1P39880 1505 aa23.86■■□□□ 1.41
POLDIP3-206ENST00000454057 LAMC3Q9Y6N6 1575 aa23.86■■□□□ 1.41
POLDIP3-206ENST00000454057 DNAJC5BQ9UF47 199 aa23.85■■□□□ 1.41
POLDIP3-206ENST00000454057 NESP48681 1621 aa23.81■■□□□ 1.4
POLDIP3-206ENST00000454057 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
POLDIP3-206ENST00000454057 SOGA1O94964 1423 aa23.8■■□□□ 1.4
POLDIP3-206ENST00000454057 FAM9AQ8IZU1 332 aaPredicted RBP23.79■■□□□ 1.4
POLDIP3-206ENST00000454057 EEA1Q15075 1411 aa23.78■■□□□ 1.4
POLDIP3-206ENST00000454057 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
POLDIP3-206ENST00000454057 RUSC2Q8N2Y8 1516 aa23.73■■□□□ 1.39
POLDIP3-206ENST00000454057 DNMBPQ6XZF7 1577 aa23.63■■□□□ 1.37
POLDIP3-206ENST00000454057 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
POLDIP3-206ENST00000454057 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
POLDIP3-206ENST00000454057 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
POLDIP3-206ENST00000454057 TOPBP1Q92547 1522 aa23.56■■□□□ 1.36
POLDIP3-206ENST00000454057 CSRNP3Q8WYN3 585 aa23.56■■□□□ 1.36
POLDIP3-206ENST00000454057 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
POLDIP3-206ENST00000454057 KIF21BO75037 1637 aa23.53■■□□□ 1.36
POLDIP3-206ENST00000454057 URB2Q14146 1524 aaKnown RBP23.52■■□□□ 1.36
POLDIP3-206ENST00000454057 GOLGA3Q08378 1498 aa23.46■■□□□ 1.35
POLDIP3-206ENST00000454057 KIF27Q86VH2 1401 aa23.45■■□□□ 1.34
POLDIP3-206ENST00000454057 POLA1P09884 1462 aaPredicted RBP23.44■■□□□ 1.34
POLDIP3-206ENST00000454057 EHMT2Q96KQ7 1210 aa23.4■■□□□ 1.34
POLDIP3-206ENST00000454057 CUX2O14529 1486 aa23.39■■□□□ 1.34
POLDIP3-206ENST00000454057 TNIKQ9UKE5 1360 aa23.39■■□□□ 1.33
POLDIP3-206ENST00000454057 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
POLDIP3-206ENST00000454057 PRXQ9BXM0 1461 aa23.37■■□□□ 1.33
POLDIP3-206ENST00000454057 WDR97A6NE52 1622 aa23.37■■□□□ 1.33
POLDIP3-206ENST00000454057 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
POLDIP3-206ENST00000454057 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
POLDIP3-206ENST00000454057 RAD54L2Q9Y4B4 1467 aa23.34■■□□□ 1.33
POLDIP3-206ENST00000454057 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
POLDIP3-206ENST00000454057 WDR62O43379 1518 aa23.27■■□□□ 1.32
POLDIP3-206ENST00000454057 CEP162Q5TB80 1403 aa23.26■■□□□ 1.31
POLDIP3-206ENST00000454057 IGF1RP08069 1367 aa23.25■■□□□ 1.31
POLDIP3-206ENST00000454057 TARBP1Q13395 1621 aaKnown RBP23.24■■□□□ 1.31
POLDIP3-206ENST00000454057 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
POLDIP3-206ENST00000454057 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
POLDIP3-206ENST00000454057 UBTFP17480 764 aaKnown RBP23.19■■□□□ 1.3
POLDIP3-206ENST00000454057 ERCC6Q03468 1493 aa23.16■■□□□ 1.3
POLDIP3-206ENST00000454057 CUL7Q14999 1698 aa23.13■■□□□ 1.29
POLDIP3-206ENST00000454057 CARMIL1Q5VZK9 1371 aa23.1■■□□□ 1.29
POLDIP3-206ENST00000454057 GAPVD1Q14C86 1478 aa23.07■■□□□ 1.28
POLDIP3-206ENST00000454057 IFT140Q96RY7 1462 aa23.07■■□□□ 1.28
POLDIP3-206ENST00000454057 TDRD9Q8NDG6 1382 aaKnown RBP23.05■■□□□ 1.28
POLDIP3-206ENST00000454057 CLIP1P30622 1438 aa23.05■■□□□ 1.28
POLDIP3-206ENST00000454057 PBRM1Q86U86 1689 aa23.01■■□□□ 1.27
POLDIP3-206ENST00000454057 ZNF608Q9ULD9 1512 aaPredicted RBP22.94■■□□□ 1.26
POLDIP3-206ENST00000454057 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.261e-7■■■■■ 31
POLDIP3-206ENST00000454057 ADAMTS12P58397 1594 aa22.91■■□□□ 1.26
POLDIP3-206ENST00000454057 EIF4G3O43432 1585 aaKnown RBP22.9■■□□□ 1.26
POLDIP3-206ENST00000454057 GRIN2BQ13224 1484 aa22.9■■□□□ 1.26
POLDIP3-206ENST00000454057 ARAP1Q96P48 1450 aa22.9■■□□□ 1.26
POLDIP3-206ENST00000454057 VPS8Q8N3P4 1428 aa22.89■■□□□ 1.25
POLDIP3-206ENST00000454057 CTTNBP2Q8WZ74 1663 aa22.87■■□□□ 1.25
POLDIP3-206ENST00000454057 ARHGAP35Q9NRY4 1499 aa22.85■■□□□ 1.25
POLDIP3-206ENST00000454057 FHAD1B1AJZ9 1412 aa22.84■■□□□ 1.25
POLDIP3-206ENST00000454057 TRIM26Q12899 539 aaPredicted RBP22.77■■□□□ 1.24
POLDIP3-206ENST00000454057 SNAPC4Q5SXM2 1469 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms