RNA–Protein interactions for RNA: ENST00000454015.1

LINC01011-203, Transcript of long intergenic non-protein coding RNA 1011, humanhuman

TSL 5

Gene LINC01011, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01011-203ENST00000454015 NISCHQ9Y2I1 1504 aa27.54■■■□□ 2
LINC01011-203ENST00000454015 ABCC9O60706 1549 aa24.88■■□□□ 1.57
LINC01011-203ENST00000454015 CCDC180Q9P1Z9 1646 aa24.74■■□□□ 1.55
LINC01011-203ENST00000454015 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
LINC01011-203ENST00000454015 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
LINC01011-203ENST00000454015 NACADO15069 1562 aa23.45■■□□□ 1.34
LINC01011-203ENST00000454015 DCAF8L2P0C7V8 631 aa23.23■■□□□ 1.31
LINC01011-203ENST00000454015 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.3
LINC01011-203ENST00000454015 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
LINC01011-203ENST00000454015 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
LINC01011-203ENST00000454015 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
LINC01011-203ENST00000454015 ZCCHC6Q5VYS8 1495 aaKnown RBP22.79■■□□□ 1.24
LINC01011-203ENST00000454015 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
LINC01011-203ENST00000454015 SHROOM4Q9ULL8 1493 aa22.68■■□□□ 1.22
LINC01011-203ENST00000454015 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
LINC01011-203ENST00000454015 CC2D2AQ9P2K1 1620 aa22.48■■□□□ 1.19
LINC01011-203ENST00000454015 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
LINC01011-203ENST00000454015 EIF4G1Q04637 1599 aaKnown RBP22.41■■□□□ 1.18
LINC01011-203ENST00000454015 DNAJC5Q9H3Z4 198 aa21.75■■□□□ 1.07
LINC01011-203ENST00000454015 NCAPD3P42695 1498 aa21.7■■□□□ 1.06
LINC01011-203ENST00000454015 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.05
LINC01011-203ENST00000454015 CUX2O14529 1486 aa21.54■■□□□ 1.04
LINC01011-203ENST00000454015 HMGXB3Q12766 1538 aa21.49■■□□□ 1.03
LINC01011-203ENST00000454015 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
LINC01011-203ENST00000454015 SMARCA4P51532 1647 aa21.48■■□□□ 1.03
LINC01011-203ENST00000454015 ERCC6Q03468 1493 aa21.47■■□□□ 1.03
LINC01011-203ENST00000454015 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
LINC01011-203ENST00000454015 NESP48681 1621 aa21.35■■□□□ 1.01
LINC01011-203ENST00000454015 PEG3Q9GZU2 1588 aa21.33■■□□□ 1.01
LINC01011-203ENST00000454015 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
LINC01011-203ENST00000454015 MROH2BQ7Z745 1585 aa21.21■□□□□ 0.99
LINC01011-203ENST00000454015 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
LINC01011-203ENST00000454015 THOC2Q8NI27 1593 aaKnown RBP21.16■□□□□ 0.98
LINC01011-203ENST00000454015 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.97
LINC01011-203ENST00000454015 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.95
LINC01011-203ENST00000454015 CADPSQ9ULU8 1353 aa21.01■□□□□ 0.95
LINC01011-203ENST00000454015 WIZO95785 1651 aa20.9■□□□□ 0.94
LINC01011-203ENST00000454015 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
LINC01011-203ENST00000454015 WDR62O43379 1518 aa20.86■□□□□ 0.93
LINC01011-203ENST00000454015 CEP164Q9UPV0 1460 aa20.76■□□□□ 0.91
LINC01011-203ENST00000454015 CFTRP13569 1480 aa20.75■□□□□ 0.91
LINC01011-203ENST00000454015 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
LINC01011-203ENST00000454015 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
LINC01011-203ENST00000454015 TOP2AP11388 1531 aaKnown RBP20.65■□□□□ 0.9
LINC01011-203ENST00000454015 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
LINC01011-203ENST00000454015 URB2Q14146 1524 aaKnown RBP20.59■□□□□ 0.89
LINC01011-203ENST00000454015 OSCARQ8IYS5 282 aa20.54■□□□□ 0.88
LINC01011-203ENST00000454015 CCDC88BA6NC98 1476 aa20.44■□□□□ 0.86
LINC01011-203ENST00000454015 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
LINC01011-203ENST00000454015 IFT140Q96RY7 1462 aa20.37■□□□□ 0.85
LINC01011-203ENST00000454015 ZNF608Q9ULD9 1512 aaPredicted RBP20.36■□□□□ 0.85
LINC01011-203ENST00000454015 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
LINC01011-203ENST00000454015 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
LINC01011-203ENST00000454015 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
LINC01011-203ENST00000454015 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
LINC01011-203ENST00000454015 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
LINC01011-203ENST00000454015 DNMBPQ6XZF7 1577 aa20.23■□□□□ 0.83
LINC01011-203ENST00000454015 EIF4G3O43432 1585 aaKnown RBP20.21■□□□□ 0.83
LINC01011-203ENST00000454015 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
LINC01011-203ENST00000454015 TARBP1Q13395 1621 aaKnown RBP20.18■□□□□ 0.82
LINC01011-203ENST00000454015 AQRO60306 1485 aaKnown RBP eCLIP20.16■□□□□ 0.82
LINC01011-203ENST00000454015 POLA1P09884 1462 aaPredicted RBP20.13■□□□□ 0.81
LINC01011-203ENST00000454015 CYB5RLQ6IPT4 315 aa20.05■□□□□ 0.8
LINC01011-203ENST00000454015 CHD1O14646 1710 aa20.05■□□□□ 0.8
LINC01011-203ENST00000454015 RAD54L2Q9Y4B4 1467 aa20.04■□□□□ 0.8
LINC01011-203ENST00000454015 SOGA1O94964 1423 aa20.02■□□□□ 0.8
LINC01011-203ENST00000454015 TDRD9Q8NDG6 1382 aaKnown RBP20■□□□□ 0.79
LINC01011-203ENST00000454015 FBLN2P98095 1184 aa20■□□□□ 0.79
LINC01011-203ENST00000454015 ARAP1Q96P48 1450 aa19.99■□□□□ 0.79
LINC01011-203ENST00000454015 FGD5Q6ZNL6 1462 aa19.96■□□□□ 0.79
LINC01011-203ENST00000454015 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
LINC01011-203ENST00000454015 CUX1P39880 1505 aa19.92■□□□□ 0.78
LINC01011-203ENST00000454015 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
LINC01011-203ENST00000454015 CLASP1Q7Z460 1538 aa19.89■□□□□ 0.77
LINC01011-203ENST00000454015 MAGI1Q96QZ7 1491 aaPredicted RBP19.89■□□□□ 0.77
LINC01011-203ENST00000454015 GRIN2BQ13224 1484 aa19.87■□□□□ 0.77
LINC01011-203ENST00000454015 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
LINC01011-203ENST00000454015 TRHP20396 242 aaPredicted RBP19.83■□□□□ 0.77
LINC01011-203ENST00000454015 SYNJ2O15056 1496 aa19.83■□□□□ 0.76
LINC01011-203ENST00000454015 SYNJ1O43426 1573 aa19.82■□□□□ 0.76
LINC01011-203ENST00000454015 GAPVD1Q14C86 1478 aa19.78■□□□□ 0.76
LINC01011-203ENST00000454015 ABCA10Q8WWZ4 1543 aa19.75■□□□□ 0.75
LINC01011-203ENST00000454015 ABCA5Q8WWZ7 1642 aa19.71■□□□□ 0.75
LINC01011-203ENST00000454015 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
LINC01011-203ENST00000454015 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
LINC01011-203ENST00000454015 SUPT5HO00267 1087 aaKnown RBP19.62■□□□□ 0.73
LINC01011-203ENST00000454015 GRIN2AQ12879 1464 aa19.61■□□□□ 0.73
LINC01011-203ENST00000454015 NUP160Q12769 1436 aa19.58■□□□□ 0.72
LINC01011-203ENST00000454015 TOP2BQ02880 1626 aa19.56■□□□□ 0.72
LINC01011-203ENST00000454015 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
LINC01011-203ENST00000454015 ERCC6L2Q5T890 1561 aa19.55■□□□□ 0.72
LINC01011-203ENST00000454015 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
LINC01011-203ENST00000454015 CEP170Q5SW79 1584 aa19.53■□□□□ 0.72
LINC01011-203ENST00000454015 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.72
LINC01011-203ENST00000454015 SHROOM2Q13796 1616 aa19.49■□□□□ 0.71
LINC01011-203ENST00000454015 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
LINC01011-203ENST00000454015 PRG4Q92954 1404 aaPredicted RBP19.37■□□□□ 0.69
LINC01011-203ENST00000454015 JPH4Q96JJ6 628 aa19.37■□□□□ 0.69
LINC01011-203ENST00000454015 AEBP2Q6ZN18 517 aaPredicted RBP19.35■□□□□ 0.69
LINC01011-203ENST00000454015 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms