RNA–Protein interactions for RNA: ENST00000453863.5

RNF220-206, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-206ENST00000453863 NISCHQ9Y2I1 1504 aa22.07■■□□□ 1.12
RNF220-206ENST00000453863 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
RNF220-206ENST00000453863 ABCC9O60706 1549 aa19.24■□□□□ 0.67
RNF220-206ENST00000453863 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
RNF220-206ENST00000453863 NACADO15069 1562 aa18.54■□□□□ 0.56
RNF220-206ENST00000453863 MYO15BQ96JP2 1530 aa18.42■□□□□ 0.54
RNF220-206ENST00000453863 ZCCHC6Q5VYS8 1495 aaKnown RBP18.4■□□□□ 0.54
RNF220-206ENST00000453863 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
RNF220-206ENST00000453863 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
RNF220-206ENST00000453863 UNC13AQ9UPW8 1703 aa18.11■□□□□ 0.49
RNF220-206ENST00000453863 SCRIBQ14160 1630 aa17.95■□□□□ 0.46
RNF220-206ENST00000453863 BICRAQ9NZM4 1560 aa17.91■□□□□ 0.46
RNF220-206ENST00000453863 SHROOM4Q9ULL8 1493 aa17.9■□□□□ 0.46
RNF220-206ENST00000453863 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
RNF220-206ENST00000453863 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
RNF220-206ENST00000453863 EIF4G1Q04637 1599 aaKnown RBP17.5■□□□□ 0.39
RNF220-206ENST00000453863 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
RNF220-206ENST00000453863 CECR2Q9BXF3 1484 aa17.32■□□□□ 0.36
RNF220-206ENST00000453863 BAZ1AQ9NRL2 1556 aaPredicted RBP17.18■□□□□ 0.34
RNF220-206ENST00000453863 SMARCA4P51532 1647 aa17.18■□□□□ 0.34
RNF220-206ENST00000453863 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
RNF220-206ENST00000453863 HMGXB3Q12766 1538 aa17.04■□□□□ 0.32
RNF220-206ENST00000453863 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
RNF220-206ENST00000453863 ATAD2BQ9ULI0 1458 aa17.04■□□□□ 0.32
RNF220-206ENST00000453863 PEG3Q9GZU2 1588 aa17.01■□□□□ 0.31
RNF220-206ENST00000453863 MROH2BQ7Z745 1585 aa16.97■□□□□ 0.31
RNF220-206ENST00000453863 BAZ1BQ9UIG0 1483 aaKnown RBP16.96■□□□□ 0.31
RNF220-206ENST00000453863 WIZO95785 1651 aa16.8■□□□□ 0.28
RNF220-206ENST00000453863 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
RNF220-206ENST00000453863 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
RNF220-206ENST00000453863 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
RNF220-206ENST00000453863 ERCC6Q03468 1493 aa16.68■□□□□ 0.26
RNF220-206ENST00000453863 NESP48681 1621 aa16.59■□□□□ 0.25
RNF220-206ENST00000453863 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
RNF220-206ENST00000453863 CADPSQ9ULU8 1353 aa16.53■□□□□ 0.24
RNF220-206ENST00000453863 CUX2O14529 1486 aa16.51■□□□□ 0.23
RNF220-206ENST00000453863 KIF21AQ7Z4S6 1674 aa16.5■□□□□ 0.23
RNF220-206ENST00000453863 THOC2Q8NI27 1593 aaKnown RBP16.45■□□□□ 0.22
RNF220-206ENST00000453863 CFTRP13569 1480 aa16.44■□□□□ 0.22
RNF220-206ENST00000453863 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
RNF220-206ENST00000453863 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
RNF220-206ENST00000453863 CEP164Q9UPV0 1460 aa16.41■□□□□ 0.22
RNF220-206ENST00000453863 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
RNF220-206ENST00000453863 MRC2Q9UBG0 1479 aa16.38■□□□□ 0.21
RNF220-206ENST00000453863 WDR62O43379 1518 aa16.32■□□□□ 0.2
RNF220-206ENST00000453863 SUPT5HO00267 1087 aaKnown RBP16.27■□□□□ 0.2
RNF220-206ENST00000453863 URB2Q14146 1524 aaKnown RBP16.18■□□□□ 0.18
RNF220-206ENST00000453863 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
RNF220-206ENST00000453863 DNMBPQ6XZF7 1577 aa16.13■□□□□ 0.17
RNF220-206ENST00000453863 TOPBP1Q92547 1522 aa16.1■□□□□ 0.17
RNF220-206ENST00000453863 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
RNF220-206ENST00000453863 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
RNF220-206ENST00000453863 CUX1P39880 1505 aa15.94■□□□□ 0.14
RNF220-206ENST00000453863 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
RNF220-206ENST00000453863 EIF4G3O43432 1585 aaKnown RBP15.93■□□□□ 0.14
RNF220-206ENST00000453863 WDR97A6NE52 1622 aa15.93■□□□□ 0.14
RNF220-206ENST00000453863 FGD5Q6ZNL6 1462 aa15.92■□□□□ 0.14
RNF220-206ENST00000453863 DNAJC5Q9H3Z4 198 aa15.91■□□□□ 0.14
RNF220-206ENST00000453863 ZNF608Q9ULD9 1512 aaPredicted RBP15.89■□□□□ 0.13
RNF220-206ENST00000453863 SOGA1O94964 1423 aa15.87■□□□□ 0.13
RNF220-206ENST00000453863 BIVM-ERCC5R4GMW8 1640 aa15.86■□□□□ 0.13
RNF220-206ENST00000453863 WRNQ14191 1432 aaPredicted RBP eCLIP15.86■□□□□ 0.13
RNF220-206ENST00000453863 TOP2BQ02880 1626 aa15.85■□□□□ 0.13
RNF220-206ENST00000453863 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
RNF220-206ENST00000453863 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
RNF220-206ENST00000453863 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.125e-7■■■■□ 19.4
RNF220-206ENST00000453863 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
RNF220-206ENST00000453863 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
RNF220-206ENST00000453863 GRIN2BQ13224 1484 aa15.75■□□□□ 0.11
RNF220-206ENST00000453863 PBRM1Q86U86 1689 aa15.75■□□□□ 0.11
RNF220-206ENST00000453863 MAGI1Q96QZ7 1491 aaPredicted RBP15.74■□□□□ 0.11
RNF220-206ENST00000453863 ABCA5Q8WWZ7 1642 aa15.74■□□□□ 0.11
RNF220-206ENST00000453863 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
RNF220-206ENST00000453863 CHD1O14646 1710 aa15.73■□□□□ 0.11
RNF220-206ENST00000453863 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
RNF220-206ENST00000453863 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.11
RNF220-206ENST00000453863 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
RNF220-206ENST00000453863 FBLN2P98095 1184 aa15.64■□□□□ 0.09
RNF220-206ENST00000453863 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
RNF220-206ENST00000453863 ADAMTS12P58397 1594 aa15.62■□□□□ 0.09
RNF220-206ENST00000453863 CHMP7Q8WUX9 453 aaPredicted RBP15.61■□□□□ 0.09
RNF220-206ENST00000453863 FHAD1B1AJZ9 1412 aa15.55■□□□□ 0.08
RNF220-206ENST00000453863 KIF27Q86VH2 1401 aa15.55■□□□□ 0.08
RNF220-206ENST00000453863 GRIN2AQ12879 1464 aa15.54■□□□□ 0.08
RNF220-206ENST00000453863 CLASP1Q7Z460 1538 aa15.53■□□□□ 0.08
RNF220-206ENST00000453863 CUL7Q14999 1698 aa15.53■□□□□ 0.08
RNF220-206ENST00000453863 RIMBP3CA6NJZ7 1639 aa15.53■□□□□ 0.08
RNF220-206ENST00000453863 RIMBP3BA6NNM3 1639 aa15.53■□□□□ 0.08
RNF220-206ENST00000453863 RIMBP3Q9UFD9 1639 aa15.53■□□□□ 0.08
RNF220-206ENST00000453863 ARHGEF11O15085 1522 aa15.53■□□□□ 0.08
RNF220-206ENST00000453863 NUP160Q12769 1436 aa15.45■□□□□ 0.06
RNF220-206ENST00000453863 CEP170Q5SW79 1584 aa15.44■□□□□ 0.06
RNF220-206ENST00000453863 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
RNF220-206ENST00000453863 RUSC2Q8N2Y8 1516 aa15.38■□□□□ 0.05
RNF220-206ENST00000453863 IGF1RP08069 1367 aa15.38■□□□□ 0.05
RNF220-206ENST00000453863 SHROOM2Q13796 1616 aa15.37■□□□□ 0.05
RNF220-206ENST00000453863 ARAP1Q96P48 1450 aa15.37■□□□□ 0.05
RNF220-206ENST00000453863 CARMIL1Q5VZK9 1371 aa15.35■□□□□ 0.05
RNF220-206ENST00000453863 KIAA0586Q9BVV6 1533 aa15.3■□□□□ 0.04
RNF220-206ENST00000453863 RAPGEF2Q9Y4G8 1499 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms