RNA–Protein interactions for RNA: ENST00000453824.1

BRD8-213, Transcript of bromodomain containing 8, humanhuman

TSL 5

Gene BRD8, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-213ENST00000453824 NISCHQ9Y2I1 1504 aa24.13■■□□□ 1.45
BRD8-213ENST00000453824 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
BRD8-213ENST00000453824 ABCC9O60706 1549 aa21.67■■□□□ 1.06
BRD8-213ENST00000453824 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
BRD8-213ENST00000453824 NACADO15069 1562 aa20.51■□□□□ 0.87
BRD8-213ENST00000453824 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
BRD8-213ENST00000453824 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
BRD8-213ENST00000453824 UNC13AQ9UPW8 1703 aa20.25■□□□□ 0.83
BRD8-213ENST00000453824 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
BRD8-213ENST00000453824 PABPN1Q86U42 306 aaKnown RBP eCLIP20.13■□□□□ 0.81
BRD8-213ENST00000453824 BICRAQ9NZM4 1560 aa20.05■□□□□ 0.8
BRD8-213ENST00000453824 ZCCHC6Q5VYS8 1495 aaKnown RBP19.99■□□□□ 0.79
BRD8-213ENST00000453824 DCAF1Q9Y4B6 1507 aa19.95■□□□□ 0.78
BRD8-213ENST00000453824 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
BRD8-213ENST00000453824 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
BRD8-213ENST00000453824 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
BRD8-213ENST00000453824 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
BRD8-213ENST00000453824 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
BRD8-213ENST00000453824 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
BRD8-213ENST00000453824 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
BRD8-213ENST00000453824 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
BRD8-213ENST00000453824 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
BRD8-213ENST00000453824 HMGXB3Q12766 1538 aa18.79■□□□□ 0.6
BRD8-213ENST00000453824 BAZ1AQ9NRL2 1556 aaPredicted RBP18.75■□□□□ 0.59
BRD8-213ENST00000453824 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
BRD8-213ENST00000453824 CUX2O14529 1486 aa18.71■□□□□ 0.59
BRD8-213ENST00000453824 DNAJC5Q9H3Z4 198 aa18.69■□□□□ 0.58
BRD8-213ENST00000453824 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
BRD8-213ENST00000453824 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
BRD8-213ENST00000453824 NESP48681 1621 aa18.61■□□□□ 0.57
BRD8-213ENST00000453824 MROH2BQ7Z745 1585 aa18.58■□□□□ 0.56
BRD8-213ENST00000453824 LAMC3Q9Y6N6 1575 aa18.52■□□□□ 0.56
BRD8-213ENST00000453824 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
BRD8-213ENST00000453824 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
BRD8-213ENST00000453824 WIZO95785 1651 aa18.39■□□□□ 0.53
BRD8-213ENST00000453824 PDS5BQ9NTI5 1447 aa18.39■□□□□ 0.53
BRD8-213ENST00000453824 CADPSQ9ULU8 1353 aa18.31■□□□□ 0.52
BRD8-213ENST00000453824 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
BRD8-213ENST00000453824 WDR62O43379 1518 aa18.2■□□□□ 0.5
BRD8-213ENST00000453824 RSF1Q96T23 1441 aaPredicted RBP18.16■□□□□ 0.5
BRD8-213ENST00000453824 CEP164Q9UPV0 1460 aa18.16■□□□□ 0.5
BRD8-213ENST00000453824 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
BRD8-213ENST00000453824 CFTRP13569 1480 aa18.12■□□□□ 0.49
BRD8-213ENST00000453824 FANCD2Q9BXW9 1451 aa18.12■□□□□ 0.49
BRD8-213ENST00000453824 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
BRD8-213ENST00000453824 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
BRD8-213ENST00000453824 CCDC88BA6NC98 1476 aa17.91■□□□□ 0.46
BRD8-213ENST00000453824 TRIM41Q8WV44 630 aa17.84■□□□□ 0.45
BRD8-213ENST00000453824 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
BRD8-213ENST00000453824 IFT140Q96RY7 1462 aa17.79■□□□□ 0.44
BRD8-213ENST00000453824 TOPBP1Q92547 1522 aa17.78■□□□□ 0.44
BRD8-213ENST00000453824 ABCC8Q09428 1581 aa17.76■□□□□ 0.43
BRD8-213ENST00000453824 ZNF608Q9ULD9 1512 aaPredicted RBP17.75■□□□□ 0.43
BRD8-213ENST00000453824 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
BRD8-213ENST00000453824 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
BRD8-213ENST00000453824 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
BRD8-213ENST00000453824 RIMBP3CA6NJZ7 1639 aa17.65■□□□□ 0.42
BRD8-213ENST00000453824 RIMBP3BA6NNM3 1639 aa17.65■□□□□ 0.42
BRD8-213ENST00000453824 RIMBP3Q9UFD9 1639 aa17.65■□□□□ 0.42
BRD8-213ENST00000453824 CHD1O14646 1710 aa17.59■□□□□ 0.41
BRD8-213ENST00000453824 POLA1P09884 1462 aaPredicted RBP17.59■□□□□ 0.41
BRD8-213ENST00000453824 AQRO60306 1485 aaKnown RBP eCLIP17.57■□□□□ 0.42e-6■■□□□ 12
BRD8-213ENST00000453824 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
BRD8-213ENST00000453824 RAD54L2Q9Y4B4 1467 aa17.51■□□□□ 0.39
BRD8-213ENST00000453824 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
BRD8-213ENST00000453824 SOGA1O94964 1423 aa17.5■□□□□ 0.39
BRD8-213ENST00000453824 FGD5Q6ZNL6 1462 aa17.48■□□□□ 0.39
BRD8-213ENST00000453824 CUX1P39880 1505 aa17.47■□□□□ 0.39
BRD8-213ENST00000453824 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
BRD8-213ENST00000453824 FBLN2P98095 1184 aa17.45■□□□□ 0.38
BRD8-213ENST00000453824 SNAPC4Q5SXM2 1469 aa17.42■□□□□ 0.38
BRD8-213ENST00000453824 CYB5RLQ6IPT4 315 aa17.39■□□□□ 0.37
BRD8-213ENST00000453824 MAGI1Q96QZ7 1491 aaPredicted RBP17.38■□□□□ 0.37
BRD8-213ENST00000453824 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
BRD8-213ENST00000453824 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
BRD8-213ENST00000453824 PBRM1Q86U86 1689 aa17.36■□□□□ 0.37
BRD8-213ENST00000453824 CLASP1Q7Z460 1538 aa17.36■□□□□ 0.37
BRD8-213ENST00000453824 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
BRD8-213ENST00000453824 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.36
BRD8-213ENST00000453824 SYNJ2O15056 1496 aa17.32■□□□□ 0.36
BRD8-213ENST00000453824 SUPT5HO00267 1087 aaKnown RBP17.32■□□□□ 0.36
BRD8-213ENST00000453824 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
BRD8-213ENST00000453824 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
BRD8-213ENST00000453824 ABCA10Q8WWZ4 1543 aa17.29■□□□□ 0.36
BRD8-213ENST00000453824 BIVM-ERCC5R4GMW8 1640 aa17.23■□□□□ 0.35
BRD8-213ENST00000453824 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
BRD8-213ENST00000453824 TOP2BQ02880 1626 aa17.21■□□□□ 0.35
BRD8-213ENST00000453824 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
BRD8-213ENST00000453824 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
BRD8-213ENST00000453824 GRIN2AQ12879 1464 aa17.15■□□□□ 0.34
BRD8-213ENST00000453824 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
BRD8-213ENST00000453824 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
BRD8-213ENST00000453824 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
BRD8-213ENST00000453824 NUP160Q12769 1436 aa17.08■□□□□ 0.32
BRD8-213ENST00000453824 ERCC6L2Q5T890 1561 aa17.06■□□□□ 0.32
BRD8-213ENST00000453824 SHROOM2Q13796 1616 aa17.06■□□□□ 0.32
BRD8-213ENST00000453824 RUSC2Q8N2Y8 1516 aa16.92■□□□□ 0.3
BRD8-213ENST00000453824 PRG4Q92954 1404 aaPredicted RBP16.91■□□□□ 0.3
BRD8-213ENST00000453824 JPH4Q96JJ6 628 aa16.89■□□□□ 0.29
BRD8-213ENST00000453824 CUL7Q14999 1698 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms