RNA–Protein interactions for RNA: ENST00000453724.5

RPE-215, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-215ENST00000453724 NISCHQ9Y2I1 1504 aa15.01□□□□□ -0.01
RPE-215ENST00000453724 CCDC180Q9P1Z9 1646 aa13.46□□□□□ -0.25
RPE-215ENST00000453724 ABCC9O60706 1549 aa13.3□□□□□ -0.28
RPE-215ENST00000453724 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
RPE-215ENST00000453724 NACADO15069 1562 aa12.56□□□□□ -0.4
RPE-215ENST00000453724 ZCCHC6Q5VYS8 1495 aaKnown RBP12.55□□□□□ -0.4
RPE-215ENST00000453724 MYO15BQ96JP2 1530 aa12.55□□□□□ -0.4
RPE-215ENST00000453724 RB1CC1Q8TDY2 1594 aa12.54□□□□□ -0.4
RPE-215ENST00000453724 DCAF1Q9Y4B6 1507 aa12.52□□□□□ -0.41
RPE-215ENST00000453724 UNC13AQ9UPW8 1703 aa12.36□□□□□ -0.43
RPE-215ENST00000453724 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
RPE-215ENST00000453724 DCAF8L2P0C7V8 631 aa12.29□□□□□ -0.44
RPE-215ENST00000453724 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
RPE-215ENST00000453724 SCRIBQ14160 1630 aa12.14□□□□□ -0.47
RPE-215ENST00000453724 SHROOM4Q9ULL8 1493 aa12.12□□□□□ -0.47
RPE-215ENST00000453724 CC2D2AQ9P2K1 1620 aa12.01□□□□□ -0.49
RPE-215ENST00000453724 CECR2Q9BXF3 1484 aa11.97□□□□□ -0.49
RPE-215ENST00000453724 EIF4G1Q04637 1599 aaKnown RBP11.9□□□□□ -0.5
RPE-215ENST00000453724 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
RPE-215ENST00000453724 BAZ1AQ9NRL2 1556 aaPredicted RBP11.68□□□□□ -0.54
RPE-215ENST00000453724 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
RPE-215ENST00000453724 SMARCA2P51531 1590 aa11.59□□□□□ -0.55
RPE-215ENST00000453724 PEG3Q9GZU2 1588 aa11.59□□□□□ -0.55
RPE-215ENST00000453724 HMGXB3Q12766 1538 aa11.55□□□□□ -0.56
RPE-215ENST00000453724 MROH2BQ7Z745 1585 aa11.52□□□□□ -0.57
RPE-215ENST00000453724 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
RPE-215ENST00000453724 ATAD2BQ9ULI0 1458 aa11.51□□□□□ -0.57
RPE-215ENST00000453724 CUX2O14529 1486 aa11.5□□□□□ -0.57
RPE-215ENST00000453724 ERCC6Q03468 1493 aa11.45□□□□□ -0.58
RPE-215ENST00000453724 WIZO95785 1651 aa11.45□□□□□ -0.58
RPE-215ENST00000453724 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
RPE-215ENST00000453724 RSF1Q96T23 1441 aaPredicted RBP11.41□□□□□ -0.58
RPE-215ENST00000453724 NESP48681 1621 aa11.39□□□□□ -0.59
RPE-215ENST00000453724 TOP2AP11388 1531 aaKnown RBP11.37□□□□□ -0.59
RPE-215ENST00000453724 THOC2Q8NI27 1593 aaKnown RBP11.31□□□□□ -0.6
RPE-215ENST00000453724 PRDM2Q13029 1718 aa11.29□□□□□ -0.6
RPE-215ENST00000453724 LAMC3Q9Y6N6 1575 aa11.27□□□□□ -0.61
RPE-215ENST00000453724 KIF21AQ7Z4S6 1674 aa11.26□□□□□ -0.61
RPE-215ENST00000453724 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
RPE-215ENST00000453724 CCDC88BA6NC98 1476 aa11.14□□□□□ -0.63
RPE-215ENST00000453724 CADPSQ9ULU8 1353 aa11.14□□□□□ -0.63
RPE-215ENST00000453724 CFTRP13569 1480 aa11.13□□□□□ -0.63
RPE-215ENST00000453724 PDS5BQ9NTI5 1447 aa11.11□□□□□ -0.63
RPE-215ENST00000453724 SUPT5HO00267 1087 aaKnown RBP11.07□□□□□ -0.64
RPE-215ENST00000453724 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
RPE-215ENST00000453724 WDR62O43379 1518 aa11.06□□□□□ -0.64
RPE-215ENST00000453724 CEP164Q9UPV0 1460 aa11.05□□□□□ -0.64
RPE-215ENST00000453724 FANCD2Q9BXW9 1451 aa11.03□□□□□ -0.64
RPE-215ENST00000453724 ABCC8Q09428 1581 aa10.96□□□□□ -0.65
RPE-215ENST00000453724 DNMBPQ6XZF7 1577 aa10.94□□□□□ -0.66
RPE-215ENST00000453724 URB2Q14146 1524 aaKnown RBP10.9□□□□□ -0.66
RPE-215ENST00000453724 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
RPE-215ENST00000453724 RIMBP3CA6NJZ7 1639 aa10.9□□□□□ -0.66
RPE-215ENST00000453724 RIMBP3BA6NNM3 1639 aa10.9□□□□□ -0.66
RPE-215ENST00000453724 RIMBP3Q9UFD9 1639 aa10.9□□□□□ -0.66
RPE-215ENST00000453724 TOPBP1Q92547 1522 aa10.88□□□□□ -0.67
RPE-215ENST00000453724 BIVM-ERCC5R4GMW8 1640 aa10.87□□□□□ -0.67
RPE-215ENST00000453724 WDR97A6NE52 1622 aa10.84□□□□□ -0.67
RPE-215ENST00000453724 TOP2BQ02880 1626 aa10.84□□□□□ -0.67
RPE-215ENST00000453724 CUX1P39880 1505 aa10.83□□□□□ -0.68
RPE-215ENST00000453724 ZNF608Q9ULD9 1512 aaPredicted RBP10.82□□□□□ -0.68
RPE-215ENST00000453724 IFT140Q96RY7 1462 aa10.81□□□□□ -0.68
RPE-215ENST00000453724 ARHGEF11O15085 1522 aa10.8□□□□□ -0.68
RPE-215ENST00000453724 TARBP1Q13395 1621 aaKnown RBP10.8□□□□□ -0.68
RPE-215ENST00000453724 POLA1P09884 1462 aaPredicted RBP10.79□□□□□ -0.68
RPE-215ENST00000453724 WRNQ14191 1432 aaPredicted RBP eCLIP10.78□□□□□ -0.68
RPE-215ENST00000453724 SYNJ1O43426 1573 aa10.77□□□□□ -0.68
RPE-215ENST00000453724 FGD5Q6ZNL6 1462 aa10.77□□□□□ -0.69
RPE-215ENST00000453724 EIF4G3O43432 1585 aaKnown RBP10.75□□□□□ -0.69
RPE-215ENST00000453724 CHD1O14646 1710 aa10.75□□□□□ -0.69
RPE-215ENST00000453724 PBRM1Q86U86 1689 aa10.73□□□□□ -0.69
RPE-215ENST00000453724 CYB5RLQ6IPT4 315 aa10.71□□□□□ -0.69
RPE-215ENST00000453724 ABCA10Q8WWZ4 1543 aa10.71□□□□□ -0.69
RPE-215ENST00000453724 ABCA5Q8WWZ7 1642 aa10.7□□□□□ -0.7
RPE-215ENST00000453724 ARAP1Q96P48 1450 aa10.7□□□□□ -0.7
RPE-215ENST00000453724 SOGA1O94964 1423 aa10.7□□□□□ -0.7
RPE-215ENST00000453724 AQRO60306 1485 aaKnown RBP eCLIP10.67□□□□□ -0.72e-6■■□□□ 13.2
RPE-215ENST00000453724 RAD54L2Q9Y4B4 1467 aa10.67□□□□□ -0.7
RPE-215ENST00000453724 TRHP20396 242 aaPredicted RBP10.65□□□□□ -0.7
RPE-215ENST00000453724 MAGI1Q96QZ7 1491 aaPredicted RBP10.63□□□□□ -0.71
RPE-215ENST00000453724 GRIN2BQ13224 1484 aa10.62□□□□□ -0.71
RPE-215ENST00000453724 GAPVD1Q14C86 1478 aa10.62□□□□□ -0.71
RPE-215ENST00000453724 ERICH3Q5RHP9 1530 aa10.62□□□□□ -0.71
RPE-215ENST00000453724 CUL7Q14999 1698 aa10.6□□□□□ -0.71
RPE-215ENST00000453724 FBLN2P98095 1184 aa10.6□□□□□ -0.71
RPE-215ENST00000453724 ADAMTS12P58397 1594 aa10.58□□□□□ -0.72
RPE-215ENST00000453724 KIF27Q86VH2 1401 aa10.58□□□□□ -0.72
RPE-215ENST00000453724 SNAPC4Q5SXM2 1469 aa10.57□□□□□ -0.72
RPE-215ENST00000453724 TDRD9Q8NDG6 1382 aaKnown RBP10.57□□□□□ -0.72
RPE-215ENST00000453724 CLASP1Q7Z460 1538 aa10.57□□□□□ -0.72
RPE-215ENST00000453724 SYNJ2O15056 1496 aa10.55□□□□□ -0.72
RPE-215ENST00000453724 FHAD1B1AJZ9 1412 aa10.51□□□□□ -0.73
RPE-215ENST00000453724 EEA1Q15075 1411 aa10.5□□□□□ -0.73
RPE-215ENST00000453724 GRIN2AQ12879 1464 aa10.49□□□□□ -0.73
RPE-215ENST00000453724 AEBP2Q6ZN18 517 aaPredicted RBP10.49□□□□□ -0.73
RPE-215ENST00000453724 CTTNBP2Q8WZ74 1663 aa10.45□□□□□ -0.74
RPE-215ENST00000453724 CHMP7Q8WUX9 453 aaPredicted RBP10.45□□□□□ -0.74
RPE-215ENST00000453724 ERCC6L2Q5T890 1561 aa10.44□□□□□ -0.74
RPE-215ENST00000453724 CEP170Q5SW79 1584 aa10.43□□□□□ -0.74
RPE-215ENST00000453724 RUSC2Q8N2Y8 1516 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms