RNA–Protein interactions for RNA: ENST00000453653.5

PLEKHA3-203, Transcript of pleckstrin homology domain containing A3, humanhuman

TSL 3

Gene PLEKHA3, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHA3-203ENST00000453653 NISCHQ9Y2I1 1504 aa53.14■■■■■ 6.1
PLEKHA3-203ENST00000453653 CCDC180Q9P1Z9 1646 aa47.52■■■■■ 5.2
PLEKHA3-203ENST00000453653 ABCC9O60706 1549 aa47.34■■■■■ 5.17
PLEKHA3-203ENST00000453653 RB1CC1Q8TDY2 1594 aa45.13■■■■■ 4.82
PLEKHA3-203ENST00000453653 NACADO15069 1562 aa44.88■■■■■ 4.78
PLEKHA3-203ENST00000453653 DCAF8L2P0C7V8 631 aa44.83■■■■■ 4.77
PLEKHA3-203ENST00000453653 MYO15BQ96JP2 1530 aa44.32■■■■■ 4.69
PLEKHA3-203ENST00000453653 DNAJC5BQ9UF47 199 aa44.15■■■■■ 4.66
PLEKHA3-203ENST00000453653 PABPN1Q86U42 306 aaKnown RBP eCLIP44.14■■■■■ 4.66
PLEKHA3-203ENST00000453653 UNC13AQ9UPW8 1703 aa44.1■■■■■ 4.65
PLEKHA3-203ENST00000453653 ZCCHC6Q5VYS8 1495 aaKnown RBP44.09■■■■■ 4.65
PLEKHA3-203ENST00000453653 DCAF1Q9Y4B6 1507 aa43.87■■■■■ 4.61
PLEKHA3-203ENST00000453653 BICRAQ9NZM4 1560 aa43.8■■■■■ 4.6
PLEKHA3-203ENST00000453653 SCRIBQ14160 1630 aa43.4■■■■■ 4.54
PLEKHA3-203ENST00000453653 SHROOM4Q9ULL8 1493 aa43.2■■■■■ 4.51
PLEKHA3-203ENST00000453653 CC2D2AQ9P2K1 1620 aa42.75■■■■■ 4.43
PLEKHA3-203ENST00000453653 EIF4G1Q04637 1599 aaKnown RBP42.72■■■■■ 4.43
PLEKHA3-203ENST00000453653 CECR2Q9BXF3 1484 aa42.6■■■■■ 4.41
PLEKHA3-203ENST00000453653 NCAPD3P42695 1498 aa41.43■■■■■ 4.22
PLEKHA3-203ENST00000453653 SMARCA4P51532 1647 aa41.39■■■■■ 4.22
PLEKHA3-203ENST00000453653 ATAD2BQ9ULI0 1458 aa41.37■■■■■ 4.21
PLEKHA3-203ENST00000453653 SMARCA2P51531 1590 aa41.25■■■■■ 4.19
PLEKHA3-203ENST00000453653 BAZ1AQ9NRL2 1556 aaPredicted RBP41.23■■■■■ 4.19
PLEKHA3-203ENST00000453653 HMGXB3Q12766 1538 aa41.14■■■■■ 4.18
PLEKHA3-203ENST00000453653 BAZ1BQ9UIG0 1483 aaKnown RBP41■■■■■ 4.15
PLEKHA3-203ENST00000453653 MROH2BQ7Z745 1585 aa40.97■■■■■ 4.15
PLEKHA3-203ENST00000453653 PEG3Q9GZU2 1588 aa40.95■■■■■ 4.15
PLEKHA3-203ENST00000453653 ERCC6Q03468 1493 aa40.85■■■■■ 4.13
PLEKHA3-203ENST00000453653 NESP48681 1621 aa40.75■■■■■ 4.11
PLEKHA3-203ENST00000453653 CUX2O14529 1486 aa40.63■■■■■ 4.09
PLEKHA3-203ENST00000453653 WIZO95785 1651 aa40.5■■■■■ 4.07
PLEKHA3-203ENST00000453653 LAMC3Q9Y6N6 1575 aa40.45■■■■■ 4.07
PLEKHA3-203ENST00000453653 DNAJC5Q9H3Z4 198 aa40.31■■■■■ 4.04
PLEKHA3-203ENST00000453653 PDS5BQ9NTI5 1447 aa40.24■■■■■ 4.03
PLEKHA3-203ENST00000453653 THOC2Q8NI27 1593 aaKnown RBP40.23■■■■■ 4.03
PLEKHA3-203ENST00000453653 RSF1Q96T23 1441 aaPredicted RBP40.22■■■■■ 4.03
PLEKHA3-203ENST00000453653 CADPSQ9ULU8 1353 aa40.22■■■■■ 4.03
PLEKHA3-203ENST00000453653 KIF21AQ7Z4S6 1674 aa40.19■■■■■ 4.02
PLEKHA3-203ENST00000453653 TOP2AP11388 1531 aaKnown RBP39.98■■■■□ 3.99
PLEKHA3-203ENST00000453653 MRC2Q9UBG0 1479 aa39.87■■■■□ 3.97
PLEKHA3-203ENST00000453653 CFTRP13569 1480 aa39.8■■■■□ 3.96
PLEKHA3-203ENST00000453653 CEP164Q9UPV0 1460 aa39.78■■■■□ 3.96
PLEKHA3-203ENST00000453653 FANCD2Q9BXW9 1451 aa39.76■■■■□ 3.96
PLEKHA3-203ENST00000453653 WDR62O43379 1518 aa39.75■■■■□ 3.95
PLEKHA3-203ENST00000453653 CCDC88BA6NC98 1476 aa39.56■■■■□ 3.92
PLEKHA3-203ENST00000453653 URB2Q14146 1524 aaKnown RBP39.42■■■■□ 3.9
PLEKHA3-203ENST00000453653 PRDM2Q13029 1718 aa39.39■■■■□ 3.9
PLEKHA3-203ENST00000453653 TOPBP1Q92547 1522 aa39.04■■■■□ 3.84
PLEKHA3-203ENST00000453653 IFT140Q96RY7 1462 aa38.96■■■■□ 3.83
PLEKHA3-203ENST00000453653 ABCC8Q09428 1581 aa38.94■■■■□ 3.82
PLEKHA3-203ENST00000453653 DNMBPQ6XZF7 1577 aa38.91■■■■□ 3.82
PLEKHA3-203ENST00000453653 ZNF608Q9ULD9 1512 aaPredicted RBP38.9■■■■□ 3.82
PLEKHA3-203ENST00000453653 OSCARQ8IYS5 282 aa38.86■■■■□ 3.81
PLEKHA3-203ENST00000453653 SUPT5HO00267 1087 aaKnown RBP38.73■■■■□ 3.79
PLEKHA3-203ENST00000453653 TRIM41Q8WV44 630 aa38.73■■■■□ 3.79
PLEKHA3-203ENST00000453653 EIF4G3O43432 1585 aaKnown RBP38.68■■■■□ 3.78
PLEKHA3-203ENST00000453653 POLA1P09884 1462 aaPredicted RBP38.66■■■■□ 3.78
PLEKHA3-203ENST00000453653 TARBP1Q13395 1621 aaKnown RBP38.65■■■■□ 3.78
PLEKHA3-203ENST00000453653 AQRO60306 1485 aaKnown RBP eCLIP38.59■■■■□ 3.774e-6■□□□□ 10.8
PLEKHA3-203ENST00000453653 RAD54L2Q9Y4B4 1467 aa38.54■■■■□ 3.76
PLEKHA3-203ENST00000453653 SOGA1O94964 1423 aa38.5■■■■□ 3.75
PLEKHA3-203ENST00000453653 CUX1P39880 1505 aa38.48■■■■□ 3.75
PLEKHA3-203ENST00000453653 FGD5Q6ZNL6 1462 aa38.47■■■■□ 3.75
PLEKHA3-203ENST00000453653 TDRD9Q8NDG6 1382 aaKnown RBP38.41■■■■□ 3.74
PLEKHA3-203ENST00000453653 CHD1O14646 1710 aa38.33■■■■□ 3.73
PLEKHA3-203ENST00000453653 FBLN2P98095 1184 aa38.32■■■■□ 3.72
PLEKHA3-203ENST00000453653 RIMBP3CA6NJZ7 1639 aa38.31■■■■□ 3.72
PLEKHA3-203ENST00000453653 RIMBP3BA6NNM3 1639 aa38.31■■■■□ 3.72
PLEKHA3-203ENST00000453653 RIMBP3Q9UFD9 1639 aa38.31■■■■□ 3.72
PLEKHA3-203ENST00000453653 WDR97A6NE52 1622 aa38.24■■■■□ 3.71
PLEKHA3-203ENST00000453653 ARHGEF11O15085 1522 aa38.22■■■■□ 3.71
PLEKHA3-203ENST00000453653 SNAPC4Q5SXM2 1469 aa38.21■■■■□ 3.71
PLEKHA3-203ENST00000453653 GRIN2BQ13224 1484 aa38.12■■■■□ 3.69
PLEKHA3-203ENST00000453653 MAGI1Q96QZ7 1491 aaPredicted RBP38.08■■■■□ 3.69
PLEKHA3-203ENST00000453653 CHMP7Q8WUX9 453 aaPredicted RBP38.06■■■■□ 3.68
PLEKHA3-203ENST00000453653 GAPVD1Q14C86 1478 aa38.03■■■■□ 3.68
PLEKHA3-203ENST00000453653 ABCA10Q8WWZ4 1543 aa38.02■■■■□ 3.68
PLEKHA3-203ENST00000453653 PBRM1Q86U86 1689 aa37.98■■■■□ 3.67
PLEKHA3-203ENST00000453653 CYB5RLQ6IPT4 315 aa37.97■■■■□ 3.67
PLEKHA3-203ENST00000453653 SYNJ2O15056 1496 aa37.96■■■■□ 3.67
PLEKHA3-203ENST00000453653 WRNQ14191 1432 aaPredicted RBP eCLIP37.95■■■■□ 3.67
PLEKHA3-203ENST00000453653 ABCA5Q8WWZ7 1642 aa37.94■■■■□ 3.66
PLEKHA3-203ENST00000453653 TOP2BQ02880 1626 aa37.91■■■■□ 3.66
PLEKHA3-203ENST00000453653 SYNJ1O43426 1573 aa37.91■■■■□ 3.66
PLEKHA3-203ENST00000453653 BIVM-ERCC5R4GMW8 1640 aa37.9■■■■□ 3.66
PLEKHA3-203ENST00000453653 CLASP1Q7Z460 1538 aa37.89■■■■□ 3.66
PLEKHA3-203ENST00000453653 ARAP1Q96P48 1450 aa37.88■■■■□ 3.65
PLEKHA3-203ENST00000453653 ADAMTS12P58397 1594 aa37.64■■■■□ 3.62
PLEKHA3-203ENST00000453653 GRIN2AQ12879 1464 aa37.63■■■■□ 3.61
PLEKHA3-203ENST00000453653 FHAD1B1AJZ9 1412 aa37.55■■■■□ 3.6
PLEKHA3-203ENST00000453653 ERICH3Q5RHP9 1530 aa37.55■■■■□ 3.6
PLEKHA3-203ENST00000453653 CEP170Q5SW79 1584 aa37.49■■■■□ 3.59
PLEKHA3-203ENST00000453653 NUP160Q12769 1436 aa37.48■■■■□ 3.59
PLEKHA3-203ENST00000453653 TRHP20396 242 aaPredicted RBP37.47■■■■□ 3.59
PLEKHA3-203ENST00000453653 ERCC6L2Q5T890 1561 aa37.36■■■■□ 3.57
PLEKHA3-203ENST00000453653 SHROOM2Q13796 1616 aa37.26■■■■□ 3.56
PLEKHA3-203ENST00000453653 KIF27Q86VH2 1401 aa37.2■■■■□ 3.55
PLEKHA3-203ENST00000453653 IGF1RP08069 1367 aa37.17■■■■□ 3.54
PLEKHA3-203ENST00000453653 PRG4Q92954 1404 aaPredicted RBP37.13■■■■□ 3.53
PLEKHA3-203ENST00000453653 JPH4Q96JJ6 628 aa37.13■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms