RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 NISCHQ9Y2I1 1504 aa73.86■■■■■ 9.41
CCDC117-206ENST00000453543 CCDC180Q9P1Z9 1646 aa65.85■■■■■ 8.13
CCDC117-206ENST00000453543 ABCC9O60706 1549 aa64.94■■■■■ 7.99
CCDC117-206ENST00000453543 RB1CC1Q8TDY2 1594 aa62.2■■■■■ 7.55
CCDC117-206ENST00000453543 NACADO15069 1562 aa62.01■■■■■ 7.52
CCDC117-206ENST00000453543 DCAF8L2P0C7V8 631 aa61.89■■■■■ 7.5
CCDC117-206ENST00000453543 MYO15BQ96JP2 1530 aa61.45■■■■■ 7.43
CCDC117-206ENST00000453543 ZCCHC6Q5VYS8 1495 aaKnown RBP61.44■■■■■ 7.43
CCDC117-206ENST00000453543 DCAF1Q9Y4B6 1507 aa61.04■■■■■ 7.36
CCDC117-206ENST00000453543 UNC13AQ9UPW8 1703 aa60.87■■■■■ 7.34
CCDC117-206ENST00000453543 PABPN1Q86U42 306 aaKnown RBP eCLIP60.6■■■■■ 7.29
CCDC117-206ENST00000453543 BICRAQ9NZM4 1560 aa60.41■■■■■ 7.26
CCDC117-206ENST00000453543 SCRIBQ14160 1630 aa60.12■■■■■ 7.21
CCDC117-206ENST00000453543 DNAJC5BQ9UF47 199 aa60.03■■■■■ 7.2
CCDC117-206ENST00000453543 SHROOM4Q9ULL8 1493 aa59.61■■■■■ 7.13
CCDC117-206ENST00000453543 EIF4G1Q04637 1599 aaKnown RBP58.82■■■■■ 7.01
CCDC117-206ENST00000453543 CC2D2AQ9P2K1 1620 aa58.7■■■■■ 6.99
CCDC117-206ENST00000453543 CECR2Q9BXF3 1484 aa58.36■■■■■ 6.93
CCDC117-206ENST00000453543 SMARCA4P51532 1647 aa57.43■■■■■ 6.78
CCDC117-206ENST00000453543 BAZ1AQ9NRL2 1556 aaPredicted RBP57.26■■■■■ 6.76
CCDC117-206ENST00000453543 NCAPD3P42695 1498 aa57.22■■■■■ 6.75
CCDC117-206ENST00000453543 ATAD2BQ9ULI0 1458 aa57.22■■■■■ 6.75
CCDC117-206ENST00000453543 SMARCA2P51531 1590 aa57.1■■■■■ 6.73
CCDC117-206ENST00000453543 MROH2BQ7Z745 1585 aa56.96■■■■■ 6.71
CCDC117-206ENST00000453543 HMGXB3Q12766 1538 aa56.91■■■■■ 6.7
CCDC117-206ENST00000453543 PEG3Q9GZU2 1588 aa56.84■■■■■ 6.69
CCDC117-206ENST00000453543 BAZ1BQ9UIG0 1483 aaKnown RBP56.71■■■■■ 6.67
CCDC117-206ENST00000453543 WIZO95785 1651 aa56.34■■■■■ 6.61
CCDC117-206ENST00000453543 RSF1Q96T23 1441 aaPredicted RBP56.11■■■■■ 6.57
CCDC117-206ENST00000453543 NESP48681 1621 aa56.08■■■■■ 6.57
CCDC117-206ENST00000453543 ERCC6Q03468 1493 aa55.96■■■■■ 6.55
CCDC117-206ENST00000453543 LAMC3Q9Y6N6 1575 aa55.8■■■■■ 6.52
CCDC117-206ENST00000453543 TOP2AP11388 1531 aaKnown RBP55.67■■■■■ 6.5
CCDC117-206ENST00000453543 CADPSQ9ULU8 1353 aa55.53■■■■■ 6.48
CCDC117-206ENST00000453543 CUX2O14529 1486 aa55.51■■■■■ 6.48
CCDC117-206ENST00000453543 PDS5BQ9NTI5 1447 aa55.41■■■■■ 6.46
CCDC117-206ENST00000453543 KIF21AQ7Z4S6 1674 aa55.4■■■■■ 6.46
CCDC117-206ENST00000453543 THOC2Q8NI27 1593 aaKnown RBP55.31■■■■■ 6.45
CCDC117-206ENST00000453543 CFTRP13569 1480 aa55.12■■■■■ 6.41
CCDC117-206ENST00000453543 CCDC88BA6NC98 1476 aa55.01■■■■■ 6.4
CCDC117-206ENST00000453543 FANCD2Q9BXW9 1451 aa54.93■■■■■ 6.38
CCDC117-206ENST00000453543 MRC2Q9UBG0 1479 aa54.92■■■■■ 6.38
CCDC117-206ENST00000453543 CEP164Q9UPV0 1460 aa54.9■■■■■ 6.38
CCDC117-206ENST00000453543 WDR62O43379 1518 aa54.76■■■■■ 6.36
CCDC117-206ENST00000453543 PRDM2Q13029 1718 aa54.7■■■■■ 6.35
CCDC117-206ENST00000453543 URB2Q14146 1524 aaKnown RBP54.44■■■■■ 6.31
CCDC117-206ENST00000453543 DNAJC5Q9H3Z4 198 aa54.35■■■■■ 6.29
CCDC117-206ENST00000453543 SUPT5HO00267 1087 aaKnown RBP54.34■■■■■ 6.29
CCDC117-206ENST00000453543 TOPBP1Q92547 1522 aa54.01■■■■■ 6.24
CCDC117-206ENST00000453543 DNMBPQ6XZF7 1577 aa53.9■■■■■ 6.22
CCDC117-206ENST00000453543 ABCC8Q09428 1581 aa53.89■■■■■ 6.22
CCDC117-206ENST00000453543 IFT140Q96RY7 1462 aa53.74■■■■■ 6.19
CCDC117-206ENST00000453543 ZNF608Q9ULD9 1512 aaPredicted RBP53.62■■■■■ 6.17
CCDC117-206ENST00000453543 POLA1P09884 1462 aaPredicted RBP53.52■■■■■ 6.16
CCDC117-206ENST00000453543 TARBP1Q13395 1621 aaKnown RBP53.48■■■■■ 6.15
CCDC117-206ENST00000453543 CUX1P39880 1505 aa53.46■■■■■ 6.15
CCDC117-206ENST00000453543 EIF4G3O43432 1585 aaKnown RBP53.37■■■■■ 6.13
CCDC117-206ENST00000453543 FGD5Q6ZNL6 1462 aa53.33■■■■■ 6.13
CCDC117-206ENST00000453543 RAD54L2Q9Y4B4 1467 aa53.32■■■■■ 6.13
CCDC117-206ENST00000453543 SOGA1O94964 1423 aa53.26■■■■■ 6.12
CCDC117-206ENST00000453543 AQRO60306 1485 aaKnown RBP eCLIP53.23■■■■■ 6.116e-7■■■□□ 15.2
CCDC117-206ENST00000453543 OSCARQ8IYS5 282 aa53.11■■■■■ 6.09
CCDC117-206ENST00000453543 TDRD9Q8NDG6 1382 aaKnown RBP53.05■■■■■ 6.08
CCDC117-206ENST00000453543 WDR97A6NE52 1622 aa52.95■■■■■ 6.07
CCDC117-206ENST00000453543 WRNQ14191 1432 aaPredicted RBP eCLIP52.9■■■■■ 6.06
CCDC117-206ENST00000453543 BIVM-ERCC5R4GMW8 1640 aa52.86■■■■■ 6.05
CCDC117-206ENST00000453543 SYNJ1O43426 1573 aa52.85■■■■■ 6.05
CCDC117-206ENST00000453543 TOP2BQ02880 1626 aa52.84■■■■■ 6.05
CCDC117-206ENST00000453543 CHD1O14646 1710 aa52.8■■■■■ 6.04
CCDC117-206ENST00000453543 ABCA10Q8WWZ4 1543 aa52.76■■■■■ 6.04
CCDC117-206ENST00000453543 SNAPC4Q5SXM2 1469 aa52.73■■■■■ 6.03
CCDC117-206ENST00000453543 GRIN2BQ13224 1484 aa52.69■■■■■ 6.03
CCDC117-206ENST00000453543 GAPVD1Q14C86 1478 aa52.65■■■■■ 6.02
CCDC117-206ENST00000453543 FBLN2P98095 1184 aa52.65■■■■■ 6.02
CCDC117-206ENST00000453543 ABCA5Q8WWZ7 1642 aa52.63■■■■■ 6.02
CCDC117-206ENST00000453543 PBRM1Q86U86 1689 aa52.61■■■■■ 6.01
CCDC117-206ENST00000453543 MAGI1Q96QZ7 1491 aaPredicted RBP52.6■■■■■ 6.01
CCDC117-206ENST00000453543 TRIM41Q8WV44 630 aa52.42■■■■■ 5.98
CCDC117-206ENST00000453543 SYNJ2O15056 1496 aa52.41■■■■■ 5.98
CCDC117-206ENST00000453543 CHMP7Q8WUX9 453 aaPredicted RBP52.4■■■■■ 5.98
CCDC117-206ENST00000453543 RIMBP3CA6NJZ7 1639 aa52.4■■■■■ 5.98
CCDC117-206ENST00000453543 RIMBP3BA6NNM3 1639 aa52.4■■■■■ 5.98
CCDC117-206ENST00000453543 RIMBP3Q9UFD9 1639 aa52.4■■■■■ 5.98
CCDC117-206ENST00000453543 ARHGEF11O15085 1522 aa52.32■■■■■ 5.97
CCDC117-206ENST00000453543 CLASP1Q7Z460 1538 aa52.2■■■■■ 5.95
CCDC117-206ENST00000453543 ADAMTS12P58397 1594 aa52.17■■■■■ 5.94
CCDC117-206ENST00000453543 ERICH3Q5RHP9 1530 aa52.11■■■■■ 5.93
CCDC117-206ENST00000453543 GRIN2AQ12879 1464 aa52.05■■■■■ 5.92
CCDC117-206ENST00000453543 FHAD1B1AJZ9 1412 aa52.01■■■■■ 5.92
CCDC117-206ENST00000453543 ARAP1Q96P48 1450 aa51.89■■■■■ 5.9
CCDC117-206ENST00000453543 CEP170Q5SW79 1584 aa51.84■■■■■ 5.89
CCDC117-206ENST00000453543 CYB5RLQ6IPT4 315 aa51.84■■■■■ 5.89
CCDC117-206ENST00000453543 NUP160Q12769 1436 aa51.82■■■■■ 5.89
CCDC117-206ENST00000453543 KIF27Q86VH2 1401 aa51.81■■■■■ 5.88
CCDC117-206ENST00000453543 IGF1RP08069 1367 aa51.67■■■■■ 5.86
CCDC117-206ENST00000453543 CUL7Q14999 1698 aa51.56■■■■■ 5.84
CCDC117-206ENST00000453543 SHROOM2Q13796 1616 aa51.5■■■■■ 5.84
CCDC117-206ENST00000453543 ERCC6L2Q5T890 1561 aa51.5■■■■■ 5.84
CCDC117-206ENST00000453543 RUSC2Q8N2Y8 1516 aa51.42■■■■■ 5.82
CCDC117-206ENST00000453543 CARMIL1Q5VZK9 1371 aa51.34■■■■■ 5.81
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms