RNA–Protein interactions for RNA: ENST00000453401.6

NIN-207, Transcript of ninein, humanhuman

TSL 1 (best)

Gene NIN, Length 1,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-207ENST00000453401 NISCHQ9Y2I1 1504 aa51.75■■■■■ 5.87
NIN-207ENST00000453401 CCDC180Q9P1Z9 1646 aa46.08■■■■■ 4.97
NIN-207ENST00000453401 ABCC9O60706 1549 aa45.44■■■■■ 4.86
NIN-207ENST00000453401 RB1CC1Q8TDY2 1594 aa43.53■■■■■ 4.56
NIN-207ENST00000453401 DCAF8L2P0C7V8 631 aa43.42■■■■■ 4.54
NIN-207ENST00000453401 NACADO15069 1562 aa43.4■■■■■ 4.54
NIN-207ENST00000453401 ZCCHC6Q5VYS8 1495 aaKnown RBP43.05■■■■■ 4.48
NIN-207ENST00000453401 MYO15BQ96JP2 1530 aa43.01■■■■■ 4.48
NIN-207ENST00000453401 DCAF1Q9Y4B6 1507 aa42.75■■■■■ 4.43
NIN-207ENST00000453401 UNC13AQ9UPW8 1703 aa42.54■■■■■ 4.4
NIN-207ENST00000453401 PABPN1Q86U42 306 aaKnown RBP eCLIP42.44■■■■■ 4.38
NIN-207ENST00000453401 BICRAQ9NZM4 1560 aa42.25■■■■■ 4.35
NIN-207ENST00000453401 SCRIBQ14160 1630 aa42.11■■■■■ 4.33
NIN-207ENST00000453401 DNAJC5BQ9UF47 199 aa41.95■■■■■ 4.31
NIN-207ENST00000453401 SHROOM4Q9ULL8 1493 aa41.7■■■■■ 4.27
NIN-207ENST00000453401 EIF4G1Q04637 1599 aaKnown RBP41.15■■■■■ 4.18
NIN-207ENST00000453401 CC2D2AQ9P2K1 1620 aa41.05■■■■■ 4.16
NIN-207ENST00000453401 CECR2Q9BXF3 1484 aa40.83■■■■■ 4.13
NIN-207ENST00000453401 SMARCA4P51532 1647 aa40.21■■■■■ 4.03
NIN-207ENST00000453401 BAZ1AQ9NRL2 1556 aaPredicted RBP40.11■■■■■ 4.01
NIN-207ENST00000453401 ATAD2BQ9ULI0 1458 aa40.07■■■■■ 4.01
NIN-207ENST00000453401 NCAPD3P42695 1498 aa40.06■■■■■ 4
NIN-207ENST00000453401 SMARCA2P51531 1590 aa39.98■■■■□ 3.99
NIN-207ENST00000453401 MROH2BQ7Z745 1585 aa39.9■■■■□ 3.98
NIN-207ENST00000453401 HMGXB3Q12766 1538 aa39.83■■■■□ 3.97
NIN-207ENST00000453401 PEG3Q9GZU2 1588 aa39.79■■■■□ 3.96
NIN-207ENST00000453401 BAZ1BQ9UIG0 1483 aaKnown RBP39.73■■■■□ 3.95
NIN-207ENST00000453401 WIZO95785 1651 aa39.46■■■■□ 3.91
NIN-207ENST00000453401 RSF1Q96T23 1441 aaPredicted RBP39.34■■■■□ 3.89
NIN-207ENST00000453401 NESP48681 1621 aa39.25■■■■□ 3.87
NIN-207ENST00000453401 ERCC6Q03468 1493 aa39.17■■■■□ 3.86
NIN-207ENST00000453401 LAMC3Q9Y6N6 1575 aa39.04■■■■□ 3.84
NIN-207ENST00000453401 TOP2AP11388 1531 aaKnown RBP39■■■■□ 3.83
NIN-207ENST00000453401 CADPSQ9ULU8 1353 aa38.89■■■■□ 3.82
NIN-207ENST00000453401 PDS5BQ9NTI5 1447 aa38.8■■■■□ 3.8
NIN-207ENST00000453401 CUX2O14529 1486 aa38.8■■■■□ 3.8
NIN-207ENST00000453401 KIF21AQ7Z4S6 1674 aa38.75■■■■□ 3.79
NIN-207ENST00000453401 THOC2Q8NI27 1593 aaKnown RBP38.67■■■■□ 3.78
NIN-207ENST00000453401 CFTRP13569 1480 aa38.6■■■■□ 3.77
NIN-207ENST00000453401 CCDC88BA6NC98 1476 aa38.56■■■■□ 3.76
NIN-207ENST00000453401 FANCD2Q9BXW9 1451 aa38.47■■■■□ 3.75
NIN-207ENST00000453401 MRC2Q9UBG0 1479 aa38.44■■■■□ 3.74
NIN-207ENST00000453401 CEP164Q9UPV0 1460 aa38.44■■■■□ 3.74
NIN-207ENST00000453401 WDR62O43379 1518 aa38.3■■■■□ 3.72
NIN-207ENST00000453401 PRDM2Q13029 1718 aa38.26■■■■□ 3.71
NIN-207ENST00000453401 SUPT5HO00267 1087 aaKnown RBP38.21■■■■□ 3.71
NIN-207ENST00000453401 URB2Q14146 1524 aaKnown RBP38.11■■■■□ 3.69
NIN-207ENST00000453401 DNAJC5Q9H3Z4 198 aa37.95■■■■□ 3.67
NIN-207ENST00000453401 TOPBP1Q92547 1522 aa37.82■■■■□ 3.65
NIN-207ENST00000453401 ABCC8Q09428 1581 aa37.74■■■■□ 3.63
NIN-207ENST00000453401 DNMBPQ6XZF7 1577 aa37.74■■■■□ 3.63
NIN-207ENST00000453401 IFT140Q96RY7 1462 aa37.63■■■■□ 3.61
NIN-207ENST00000453401 ZNF608Q9ULD9 1512 aaPredicted RBP37.52■■■■□ 3.6
NIN-207ENST00000453401 POLA1P09884 1462 aaPredicted RBP37.49■■■■□ 3.59
NIN-207ENST00000453401 CUX1P39880 1505 aa37.45■■■■□ 3.59
NIN-207ENST00000453401 TARBP1Q13395 1621 aaKnown RBP37.42■■■■□ 3.58
NIN-207ENST00000453401 FGD5Q6ZNL6 1462 aa37.36■■■■□ 3.57
NIN-207ENST00000453401 RAD54L2Q9Y4B4 1467 aa37.36■■■■□ 3.57
NIN-207ENST00000453401 EIF4G3O43432 1585 aaKnown RBP37.35■■■■□ 3.57
NIN-207ENST00000453401 SOGA1O94964 1423 aa37.32■■■■□ 3.57
NIN-207ENST00000453401 AQRO60306 1485 aaKnown RBP eCLIP37.28■■■■□ 3.56
NIN-207ENST00000453401 TDRD9Q8NDG6 1382 aaKnown RBP37.18■■■■□ 3.54
NIN-207ENST00000453401 OSCARQ8IYS5 282 aa37.18■■■■□ 3.54
NIN-207ENST00000453401 WRNQ14191 1432 aaPredicted RBP eCLIP37.1■■■■□ 3.53
NIN-207ENST00000453401 WDR97A6NE52 1622 aa37.05■■■■□ 3.52
NIN-207ENST00000453401 SYNJ1O43426 1573 aa37.04■■■■□ 3.52
NIN-207ENST00000453401 TOP2BQ02880 1626 aa37.02■■■■□ 3.52
NIN-207ENST00000453401 BIVM-ERCC5R4GMW8 1640 aa37.02■■■■□ 3.52
NIN-207ENST00000453401 ABCA10Q8WWZ4 1543 aa36.96■■■■□ 3.51
NIN-207ENST00000453401 SNAPC4Q5SXM2 1469 aa36.92■■■■□ 3.5
NIN-207ENST00000453401 CHD1O14646 1710 aa36.92■■■■□ 3.5
NIN-207ENST00000453401 GRIN2BQ13224 1484 aa36.92■■■■□ 3.5
NIN-207ENST00000453401 FBLN2P98095 1184 aa36.91■■■■□ 3.5
NIN-207ENST00000453401 GAPVD1Q14C86 1478 aa36.88■■■■□ 3.5
NIN-207ENST00000453401 ABCA5Q8WWZ7 1642 aa36.84■■■■□ 3.49
NIN-207ENST00000453401 MAGI1Q96QZ7 1491 aaPredicted RBP36.82■■■■□ 3.49
NIN-207ENST00000453401 PBRM1Q86U86 1689 aa36.81■■■■□ 3.48
NIN-207ENST00000453401 CHMP7Q8WUX9 453 aaPredicted RBP36.73■■■■□ 3.47
NIN-207ENST00000453401 SYNJ2O15056 1496 aa36.7■■■■□ 3.47
NIN-207ENST00000453401 TRIM41Q8WV44 630 aa36.67■■■■□ 3.46
NIN-207ENST00000453401 RIMBP3CA6NJZ7 1639 aa36.62■■■■□ 3.45
NIN-207ENST00000453401 RIMBP3BA6NNM3 1639 aa36.62■■■■□ 3.45
NIN-207ENST00000453401 RIMBP3Q9UFD9 1639 aa36.62■■■■□ 3.45
NIN-207ENST00000453401 ARHGEF11O15085 1522 aa36.59■■■■□ 3.45
NIN-207ENST00000453401 ADAMTS12P58397 1594 aa36.52■■■■□ 3.44
NIN-207ENST00000453401 ERICH3Q5RHP9 1530 aa36.51■■■■□ 3.43
NIN-207ENST00000453401 CLASP1Q7Z460 1538 aa36.51■■■■□ 3.43
NIN-207ENST00000453401 GRIN2AQ12879 1464 aa36.44■■■■□ 3.42
NIN-207ENST00000453401 FHAD1B1AJZ9 1412 aa36.44■■■■□ 3.42
NIN-207ENST00000453401 KIF27Q86VH2 1401 aa36.34■■■■□ 3.41
NIN-207ENST00000453401 CYB5RLQ6IPT4 315 aa36.29■■■■□ 3.4
NIN-207ENST00000453401 ARAP1Q96P48 1450 aa36.29■■■■□ 3.4
NIN-207ENST00000453401 NUP160Q12769 1436 aa36.28■■■■□ 3.4
NIN-207ENST00000453401 CEP170Q5SW79 1584 aa36.28■■■■□ 3.4
NIN-207ENST00000453401 IGF1RP08069 1367 aa36.23■■■■□ 3.39
NIN-207ENST00000453401 CUL7Q14999 1698 aa36.12■■■■□ 3.37
NIN-207ENST00000453401 ERCC6L2Q5T890 1561 aa36.03■■■■□ 3.36
NIN-207ENST00000453401 SHROOM2Q13796 1616 aa36.02■■■■□ 3.36
NIN-207ENST00000453401 CARMIL1Q5VZK9 1371 aa36.02■■■■□ 3.36
NIN-207ENST00000453401 RUSC2Q8N2Y8 1516 aa35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms