RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
PTPA-224ENST00000453358 ABCC9O60706 1549 aa29.84■■■□□ 2.37
PTPA-224ENST00000453358 CCDC180Q9P1Z9 1646 aa29.57■■■□□ 2.32
PTPA-224ENST00000453358 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
PTPA-224ENST00000453358 DNAJC5BQ9UF47 199 aa28.25■■■□□ 2.11
PTPA-224ENST00000453358 NACADO15069 1562 aa28.03■■■□□ 2.08
PTPA-224ENST00000453358 DCAF8L2P0C7V8 631 aa27.81■■■□□ 2.04
PTPA-224ENST00000453358 PABPN1Q86U42 306 aaKnown RBP eCLIP27.75■■■□□ 2.03
PTPA-224ENST00000453358 UNC13AQ9UPW8 1703 aa27.62■■■□□ 2.01
PTPA-224ENST00000453358 MYO15BQ96JP2 1530 aa27.58■■■□□ 2.01
PTPA-224ENST00000453358 BICRAQ9NZM4 1560 aa27.49■■□□□ 1.99
PTPA-224ENST00000453358 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
PTPA-224ENST00000453358 DCAF1Q9Y4B6 1507 aa27.15■■□□□ 1.94
PTPA-224ENST00000453358 SHROOM4Q9ULL8 1493 aa27.09■■□□□ 1.93
PTPA-224ENST00000453358 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
PTPA-224ENST00000453358 CC2D2AQ9P2K1 1620 aa26.94■■□□□ 1.9
PTPA-224ENST00000453358 CECR2Q9BXF3 1484 aa26.91■■□□□ 1.9
PTPA-224ENST00000453358 EIF4G1Q04637 1599 aaKnown RBP26.82■■□□□ 1.88
PTPA-224ENST00000453358 DNAJC5Q9H3Z4 198 aa26.1■■□□□ 1.77
PTPA-224ENST00000453358 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
PTPA-224ENST00000453358 CUX2O14529 1486 aa25.82■■□□□ 1.72
PTPA-224ENST00000453358 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
PTPA-224ENST00000453358 ERCC6Q03468 1493 aa25.76■■□□□ 1.71
PTPA-224ENST00000453358 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
PTPA-224ENST00000453358 SMARCA2P51531 1590 aa25.68■■□□□ 1.7
PTPA-224ENST00000453358 HMGXB3Q12766 1538 aa25.68■■□□□ 1.7
PTPA-224ENST00000453358 NESP48681 1621 aa25.57■■□□□ 1.68
PTPA-224ENST00000453358 BAZ1AQ9NRL2 1556 aaPredicted RBP25.52■■□□□ 1.68
PTPA-224ENST00000453358 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
PTPA-224ENST00000453358 PEG3Q9GZU2 1588 aa25.45■■□□□ 1.66
PTPA-224ENST00000453358 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
PTPA-224ENST00000453358 LAMC3Q9Y6N6 1575 aa25.34■■□□□ 1.65
PTPA-224ENST00000453358 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
PTPA-224ENST00000453358 PDS5BQ9NTI5 1447 aa25.2■■□□□ 1.63
PTPA-224ENST00000453358 KIF21AQ7Z4S6 1674 aa25.2■■□□□ 1.62
PTPA-224ENST00000453358 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
PTPA-224ENST00000453358 MRC2Q9UBG0 1479 aa25.01■■□□□ 1.59
PTPA-224ENST00000453358 WIZO95785 1651 aa24.99■■□□□ 1.59
PTPA-224ENST00000453358 WDR62O43379 1518 aa24.96■■□□□ 1.59
PTPA-224ENST00000453358 CEP164Q9UPV0 1460 aa24.85■■□□□ 1.57
PTPA-224ENST00000453358 TRIM41Q8WV44 630 aa24.83■■□□□ 1.57
PTPA-224ENST00000453358 FANCD2Q9BXW9 1451 aa24.81■■□□□ 1.56
PTPA-224ENST00000453358 CFTRP13569 1480 aa24.77■■□□□ 1.56
PTPA-224ENST00000453358 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
PTPA-224ENST00000453358 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
PTPA-224ENST00000453358 URB2Q14146 1524 aaKnown RBP24.64■■□□□ 1.53
PTPA-224ENST00000453358 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
PTPA-224ENST00000453358 PRDM2Q13029 1718 aa24.44■■□□□ 1.5
PTPA-224ENST00000453358 CCDC88BA6NC98 1476 aa24.4■■□□□ 1.5
PTPA-224ENST00000453358 ZNF608Q9ULD9 1512 aaPredicted RBP24.37■■□□□ 1.49
PTPA-224ENST00000453358 IFT140Q96RY7 1462 aa24.37■■□□□ 1.49
PTPA-224ENST00000453358 TOPBP1Q92547 1522 aa24.32■■□□□ 1.48
PTPA-224ENST00000453358 RIMBP3CA6NJZ7 1639 aa24.3■■□□□ 1.48
PTPA-224ENST00000453358 RIMBP3BA6NNM3 1639 aa24.3■■□□□ 1.48
PTPA-224ENST00000453358 RIMBP3Q9UFD9 1639 aa24.3■■□□□ 1.48
PTPA-224ENST00000453358 ABCC8Q09428 1581 aa24.24■■□□□ 1.47
PTPA-224ENST00000453358 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
PTPA-224ENST00000453358 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.46
PTPA-224ENST00000453358 DNMBPQ6XZF7 1577 aa24.19■■□□□ 1.46
PTPA-224ENST00000453358 TARBP1Q13395 1621 aaKnown RBP24.11■■□□□ 1.45
PTPA-224ENST00000453358 AQRO60306 1485 aaKnown RBP eCLIP24.11■■□□□ 1.456e-7■■□□□ 11.9
PTPA-224ENST00000453358 POLA1P09884 1462 aaPredicted RBP24.06■■□□□ 1.44
PTPA-224ENST00000453358 CHD1O14646 1710 aa24.04■■□□□ 1.44
PTPA-224ENST00000453358 CYB5RLQ6IPT4 315 aa24.04■■□□□ 1.44
PTPA-224ENST00000453358 RAD54L2Q9Y4B4 1467 aa23.98■■□□□ 1.43
PTPA-224ENST00000453358 FBLN2P98095 1184 aa23.97■■□□□ 1.43
PTPA-224ENST00000453358 ARAP1Q96P48 1450 aa23.96■■□□□ 1.43
PTPA-224ENST00000453358 SOGA1O94964 1423 aa23.93■■□□□ 1.42
PTPA-224ENST00000453358 TDRD9Q8NDG6 1382 aaKnown RBP23.92■■□□□ 1.42
PTPA-224ENST00000453358 SNAPC4Q5SXM2 1469 aa23.86■■□□□ 1.41
PTPA-224ENST00000453358 FGD5Q6ZNL6 1462 aa23.86■■□□□ 1.41
PTPA-224ENST00000453358 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
PTPA-224ENST00000453358 TRHP20396 242 aaPredicted RBP23.83■■□□□ 1.41
PTPA-224ENST00000453358 CUX1P39880 1505 aa23.81■■□□□ 1.4
PTPA-224ENST00000453358 CLASP1Q7Z460 1538 aa23.81■■□□□ 1.4
PTPA-224ENST00000453358 MAGI1Q96QZ7 1491 aaPredicted RBP23.78■■□□□ 1.4
PTPA-224ENST00000453358 CHMP7Q8WUX9 453 aaPredicted RBP23.77■■□□□ 1.4
PTPA-224ENST00000453358 GRIN2BQ13224 1484 aa23.75■■□□□ 1.39
PTPA-224ENST00000453358 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
PTPA-224ENST00000453358 SYNJ2O15056 1496 aa23.7■■□□□ 1.38
PTPA-224ENST00000453358 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
PTPA-224ENST00000453358 PBRM1Q86U86 1689 aa23.61■■□□□ 1.37
PTPA-224ENST00000453358 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
PTPA-224ENST00000453358 ABCA5Q8WWZ7 1642 aa23.56■■□□□ 1.36
PTPA-224ENST00000453358 GRIN2AQ12879 1464 aa23.46■■□□□ 1.35
PTPA-224ENST00000453358 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
PTPA-224ENST00000453358 ERCC6L2Q5T890 1561 aa23.42■■□□□ 1.34
PTPA-224ENST00000453358 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
PTPA-224ENST00000453358 ADAMTS12P58397 1594 aa23.4■■□□□ 1.34
PTPA-224ENST00000453358 NUP160Q12769 1436 aa23.4■■□□□ 1.34
PTPA-224ENST00000453358 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
PTPA-224ENST00000453358 TOP2BQ02880 1626 aa23.34■■□□□ 1.33
PTPA-224ENST00000453358 BIVM-ERCC5R4GMW8 1640 aa23.34■■□□□ 1.33
PTPA-224ENST00000453358 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.33
PTPA-224ENST00000453358 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
PTPA-224ENST00000453358 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
PTPA-224ENST00000453358 ERICH3Q5RHP9 1530 aa23.28■■□□□ 1.32
PTPA-224ENST00000453358 PRG4Q92954 1404 aaPredicted RBP23.17■■□□□ 1.3
PTPA-224ENST00000453358 JPH4Q96JJ6 628 aa23.14■■□□□ 1.29
PTPA-224ENST00000453358 KIF13AQ9H1H9 1805 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms