RNA–Protein interactions for RNA: ENST00000453166.2

IGKV2D-28-201, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

APPRIS P1

Gene IGKV2D-28, Length 396 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-201ENST00000453166 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
IGKV2D-28-201ENST00000453166 ABCC9O60706 1549 aa27.03■■□□□ 1.92
IGKV2D-28-201ENST00000453166 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
IGKV2D-28-201ENST00000453166 DNAJC5BQ9UF47 199 aa26.04■■□□□ 1.76
IGKV2D-28-201ENST00000453166 RB1CC1Q8TDY2 1594 aa25.35■■□□□ 1.65
IGKV2D-28-201ENST00000453166 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.59
IGKV2D-28-201ENST00000453166 NACADO15069 1562 aa24.97■■□□□ 1.59
IGKV2D-28-201ENST00000453166 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.58
IGKV2D-28-201ENST00000453166 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
IGKV2D-28-201ENST00000453166 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
IGKV2D-28-201ENST00000453166 DNAJC5Q9H3Z4 198 aa24.46■■□□□ 1.51
IGKV2D-28-201ENST00000453166 CECR2Q9BXF3 1484 aa24.41■■□□□ 1.5
IGKV2D-28-201ENST00000453166 CC2D2AQ9P2K1 1620 aa24.41■■□□□ 1.5
IGKV2D-28-201ENST00000453166 MYO15BQ96JP2 1530 aa24.32■■□□□ 1.48
IGKV2D-28-201ENST00000453166 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
IGKV2D-28-201ENST00000453166 EIF4G1Q04637 1599 aaKnown RBP24.14■■□□□ 1.45
IGKV2D-28-201ENST00000453166 SCRIBQ14160 1630 aa23.9■■□□□ 1.42
IGKV2D-28-201ENST00000453166 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
IGKV2D-28-201ENST00000453166 DCAF1Q9Y4B6 1507 aa23.73■■□□□ 1.39
IGKV2D-28-201ENST00000453166 CUX2O14529 1486 aa23.6■■□□□ 1.37
IGKV2D-28-201ENST00000453166 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
IGKV2D-28-201ENST00000453166 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
IGKV2D-28-201ENST00000453166 NCAPD3P42695 1498 aa23.03■■□□□ 1.28
IGKV2D-28-201ENST00000453166 NESP48681 1621 aa23.01■■□□□ 1.27
IGKV2D-28-201ENST00000453166 THOC2Q8NI27 1593 aaKnown RBP22.99■■□□□ 1.27
IGKV2D-28-201ENST00000453166 ATAD2BQ9ULI0 1458 aa22.86■■□□□ 1.25
IGKV2D-28-201ENST00000453166 HMGXB3Q12766 1538 aa22.84■■□□□ 1.25
IGKV2D-28-201ENST00000453166 SMARCA2P51531 1590 aa22.79■■□□□ 1.24
IGKV2D-28-201ENST00000453166 KIF21AQ7Z4S6 1674 aa22.77■■□□□ 1.24
IGKV2D-28-201ENST00000453166 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
IGKV2D-28-201ENST00000453166 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
IGKV2D-28-201ENST00000453166 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
IGKV2D-28-201ENST00000453166 BAZ1AQ9NRL2 1556 aaPredicted RBP22.54■■□□□ 1.2
IGKV2D-28-201ENST00000453166 PDS5BQ9NTI5 1447 aa22.51■■□□□ 1.19
IGKV2D-28-201ENST00000453166 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
IGKV2D-28-201ENST00000453166 WDR62O43379 1518 aa22.44■■□□□ 1.18
IGKV2D-28-201ENST00000453166 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
IGKV2D-28-201ENST00000453166 OSCARQ8IYS5 282 aa22.29■■□□□ 1.16
IGKV2D-28-201ENST00000453166 RIMBP3CA6NJZ7 1639 aa22.27■■□□□ 1.16
IGKV2D-28-201ENST00000453166 RIMBP3BA6NNM3 1639 aa22.27■■□□□ 1.16
IGKV2D-28-201ENST00000453166 RIMBP3Q9UFD9 1639 aa22.27■■□□□ 1.16
IGKV2D-28-201ENST00000453166 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
IGKV2D-28-201ENST00000453166 MROH2BQ7Z745 1585 aa22.22■■□□□ 1.15
IGKV2D-28-201ENST00000453166 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
IGKV2D-28-201ENST00000453166 ARHGEF11O15085 1522 aa22.08■■□□□ 1.13
IGKV2D-28-201ENST00000453166 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
IGKV2D-28-201ENST00000453166 URB2Q14146 1524 aaKnown RBP21.98■■□□□ 1.11
IGKV2D-28-201ENST00000453166 WIZO95785 1651 aa21.96■■□□□ 1.11
IGKV2D-28-201ENST00000453166 TRHP20396 242 aaPredicted RBP21.88■■□□□ 1.09
IGKV2D-28-201ENST00000453166 CFTRP13569 1480 aa21.88■■□□□ 1.09
IGKV2D-28-201ENST00000453166 CYB5RLQ6IPT4 315 aa21.86■■□□□ 1.09
IGKV2D-28-201ENST00000453166 ZNF608Q9ULD9 1512 aaPredicted RBP21.84■■□□□ 1.09
IGKV2D-28-201ENST00000453166 AEBP2Q6ZN18 517 aaPredicted RBP21.82■■□□□ 1.08
IGKV2D-28-201ENST00000453166 ARAP1Q96P48 1450 aa21.81■■□□□ 1.08
IGKV2D-28-201ENST00000453166 CHD1O14646 1710 aa21.77■■□□□ 1.08
IGKV2D-28-201ENST00000453166 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
IGKV2D-28-201ENST00000453166 IFT140Q96RY7 1462 aa21.73■■□□□ 1.07
IGKV2D-28-201ENST00000453166 EIF4G3O43432 1585 aaKnown RBP21.73■■□□□ 1.07
IGKV2D-28-201ENST00000453166 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
IGKV2D-28-201ENST00000453166 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.04
IGKV2D-28-201ENST00000453166 TOPBP1Q92547 1522 aa21.58■■□□□ 1.04
IGKV2D-28-201ENST00000453166 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
IGKV2D-28-201ENST00000453166 AQRO60306 1485 aaKnown RBP eCLIP21.49■■□□□ 1.03
IGKV2D-28-201ENST00000453166 FBLN2P98095 1184 aa21.45■■□□□ 1.02
IGKV2D-28-201ENST00000453166 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
IGKV2D-28-201ENST00000453166 CLASP1Q7Z460 1538 aa21.43■■□□□ 1.02
IGKV2D-28-201ENST00000453166 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
IGKV2D-28-201ENST00000453166 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
IGKV2D-28-201ENST00000453166 CCDC88BA6NC98 1476 aa21.3■■□□□ 1
IGKV2D-28-201ENST00000453166 SYNJ1O43426 1573 aa21.3■■□□□ 1
IGKV2D-28-201ENST00000453166 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
IGKV2D-28-201ENST00000453166 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
IGKV2D-28-201ENST00000453166 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
IGKV2D-28-201ENST00000453166 GAPVD1Q14C86 1478 aa21.21■□□□□ 0.99
IGKV2D-28-201ENST00000453166 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
IGKV2D-28-201ENST00000453166 MAGI1Q96QZ7 1491 aaPredicted RBP21.16■□□□□ 0.98
IGKV2D-28-201ENST00000453166 CHMP7Q8WUX9 453 aaPredicted RBP21.14■□□□□ 0.97
IGKV2D-28-201ENST00000453166 SOGA1O94964 1423 aa21.12■□□□□ 0.97
IGKV2D-28-201ENST00000453166 SYNJ2O15056 1496 aa21.11■□□□□ 0.97
IGKV2D-28-201ENST00000453166 KIF13AQ9H1H9 1805 aa21.09■□□□□ 0.97
IGKV2D-28-201ENST00000453166 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
IGKV2D-28-201ENST00000453166 FGD5Q6ZNL6 1462 aa21.07■□□□□ 0.96
IGKV2D-28-201ENST00000453166 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
IGKV2D-28-201ENST00000453166 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
IGKV2D-28-201ENST00000453166 ILDR1Q86SU0 546 aaPredicted RBP21.05■□□□□ 0.96
IGKV2D-28-201ENST00000453166 CUX1P39880 1505 aa20.93■□□□□ 0.94
IGKV2D-28-201ENST00000453166 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
IGKV2D-28-201ENST00000453166 ABCA5Q8WWZ7 1642 aa20.87■□□□□ 0.93
IGKV2D-28-201ENST00000453166 SHROOM2Q13796 1616 aa20.85■□□□□ 0.93
IGKV2D-28-201ENST00000453166 KDM4FA0A1W2PPD8 638 aa20.84■□□□□ 0.93
IGKV2D-28-201ENST00000453166 GRIN2AQ12879 1464 aa20.83■□□□□ 0.93
IGKV2D-28-201ENST00000453166 NUP160Q12769 1436 aa20.78■□□□□ 0.92
IGKV2D-28-201ENST00000453166 ADAMTS12P58397 1594 aa20.77■□□□□ 0.92
IGKV2D-28-201ENST00000453166 KDM6BO15054 1643 aa20.76■□□□□ 0.91
IGKV2D-28-201ENST00000453166 ABCA10Q8WWZ4 1543 aa20.74■□□□□ 0.91
IGKV2D-28-201ENST00000453166 DIP2BQ9P265 1576 aa20.74■□□□□ 0.91
IGKV2D-28-201ENST00000453166 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
IGKV2D-28-201ENST00000453166 TSPOAP1O95153 1857 aa20.69■□□□□ 0.9
IGKV2D-28-201ENST00000453166 FAM69CQ0P6D2 419 aa20.69■□□□□ 0.9
IGKV2D-28-201ENST00000453166 MAPKBP1O60336 1514 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms