RNA–Protein interactions for RNA: ENST00000453141.5

HDLBP-226, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-226ENST00000453141 NISCHQ9Y2I1 1504 aa18.7■□□□□ 0.58
HDLBP-226ENST00000453141 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
HDLBP-226ENST00000453141 ABCC9O60706 1549 aa16.69■□□□□ 0.26
HDLBP-226ENST00000453141 RB1CC1Q8TDY2 1594 aa15.93■□□□□ 0.14
HDLBP-226ENST00000453141 NACADO15069 1562 aa15.83■□□□□ 0.13
HDLBP-226ENST00000453141 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
HDLBP-226ENST00000453141 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
HDLBP-226ENST00000453141 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
HDLBP-226ENST00000453141 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
HDLBP-226ENST00000453141 ZCCHC6Q5VYS8 1495 aaKnown RBP15.52■□□□□ 0.08
HDLBP-226ENST00000453141 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.08
HDLBP-226ENST00000453141 DCAF1Q9Y4B6 1507 aa15.47■□□□□ 0.07
HDLBP-226ENST00000453141 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
HDLBP-226ENST00000453141 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
HDLBP-226ENST00000453141 SCRIBQ14160 1630 aa15.28■□□□□ 0.04
HDLBP-226ENST00000453141 CC2D2AQ9P2K1 1620 aa15.09■□□□□ 0.01
HDLBP-226ENST00000453141 EIF4G1Q04637 1599 aaKnown RBP15.08■□□□□ 0
HDLBP-226ENST00000453141 CECR2Q9BXF3 1484 aa15.03■□□□□ -0
HDLBP-226ENST00000453141 NCAPD3P42695 1498 aa14.61□□□□□ -0.07
HDLBP-226ENST00000453141 SMARCA4P51532 1647 aa14.59□□□□□ -0.07
HDLBP-226ENST00000453141 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
HDLBP-226ENST00000453141 SMARCA2P51531 1590 aa14.55□□□□□ -0.08
HDLBP-226ENST00000453141 BAZ1AQ9NRL2 1556 aaPredicted RBP14.53□□□□□ -0.08
HDLBP-226ENST00000453141 HMGXB3Q12766 1538 aa14.53□□□□□ -0.08
HDLBP-226ENST00000453141 PEG3Q9GZU2 1588 aa14.45□□□□□ -0.1
HDLBP-226ENST00000453141 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
HDLBP-226ENST00000453141 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
HDLBP-226ENST00000453141 MROH2BQ7Z745 1585 aa14.4□□□□□ -0.1
HDLBP-226ENST00000453141 CUX2O14529 1486 aa14.38□□□□□ -0.11
HDLBP-226ENST00000453141 NESP48681 1621 aa14.35□□□□□ -0.11
HDLBP-226ENST00000453141 LAMC3Q9Y6N6 1575 aa14.29□□□□□ -0.12
HDLBP-226ENST00000453141 DNAJC5Q9H3Z4 198 aa14.26□□□□□ -0.13
HDLBP-226ENST00000453141 WIZO95785 1651 aa14.23□□□□□ -0.13
HDLBP-226ENST00000453141 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
HDLBP-226ENST00000453141 PDS5BQ9NTI5 1447 aa14.2□□□□□ -0.14
HDLBP-226ENST00000453141 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
HDLBP-226ENST00000453141 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
HDLBP-226ENST00000453141 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
HDLBP-226ENST00000453141 MRC2Q9UBG0 1479 aa14.07□□□□□ -0.16
HDLBP-226ENST00000453141 TOP2AP11388 1531 aaKnown RBP14.07□□□□□ -0.16
HDLBP-226ENST00000453141 WDR62O43379 1518 aa14.04□□□□□ -0.16
HDLBP-226ENST00000453141 AEBP2Q6ZN18 517 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-226ENST00000453141 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
HDLBP-226ENST00000453141 CFTRP13569 1480 aa14.02□□□□□ -0.16
HDLBP-226ENST00000453141 FANCD2Q9BXW9 1451 aa14.01□□□□□ -0.17
HDLBP-226ENST00000453141 CCDC88BA6NC98 1476 aa13.9□□□□□ -0.18
HDLBP-226ENST00000453141 PRDM2Q13029 1718 aa13.89□□□□□ -0.19
HDLBP-226ENST00000453141 URB2Q14146 1524 aaKnown RBP13.89□□□□□ -0.19
HDLBP-226ENST00000453141 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
HDLBP-226ENST00000453141 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
HDLBP-226ENST00000453141 ABCC8Q09428 1581 aa13.73□□□□□ -0.21
HDLBP-226ENST00000453141 DNMBPQ6XZF7 1577 aa13.71□□□□□ -0.21
HDLBP-226ENST00000453141 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
HDLBP-226ENST00000453141 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
HDLBP-226ENST00000453141 TRIM41Q8WV44 630 aa13.66□□□□□ -0.22
HDLBP-226ENST00000453141 EIF4G3O43432 1585 aaKnown RBP13.66□□□□□ -0.22
HDLBP-226ENST00000453141 TARBP1Q13395 1621 aaKnown RBP13.63□□□□□ -0.23
HDLBP-226ENST00000453141 POLA1P09884 1462 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-226ENST00000453141 AQRO60306 1485 aaKnown RBP eCLIP13.58□□□□□ -0.242e-8■■■■□ 19.8
HDLBP-226ENST00000453141 RAD54L2Q9Y4B4 1467 aa13.55□□□□□ -0.24
HDLBP-226ENST00000453141 SOGA1O94964 1423 aa13.55□□□□□ -0.24
HDLBP-226ENST00000453141 FGD5Q6ZNL6 1462 aa13.54□□□□□ -0.24
HDLBP-226ENST00000453141 CUX1P39880 1505 aa13.54□□□□□ -0.24
HDLBP-226ENST00000453141 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
HDLBP-226ENST00000453141 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
HDLBP-226ENST00000453141 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
HDLBP-226ENST00000453141 SUPT5HO00267 1087 aaKnown RBP13.52□□□□□ -0.25
HDLBP-226ENST00000453141 WDR97A6NE52 1622 aa13.52□□□□□ -0.25
HDLBP-226ENST00000453141 CHD1O14646 1710 aa13.52□□□□□ -0.25
HDLBP-226ENST00000453141 ARHGEF11O15085 1522 aa13.51□□□□□ -0.25
HDLBP-226ENST00000453141 TDRD9Q8NDG6 1382 aaKnown RBP13.51□□□□□ -0.25
HDLBP-226ENST00000453141 FBLN2P98095 1184 aa13.47□□□□□ -0.25
HDLBP-226ENST00000453141 SNAPC4Q5SXM2 1469 aa13.46□□□□□ -0.25
HDLBP-226ENST00000453141 GRIN2BQ13224 1484 aa13.43□□□□□ -0.26
HDLBP-226ENST00000453141 MAGI1Q96QZ7 1491 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-226ENST00000453141 ABCA10Q8WWZ4 1543 aa13.39□□□□□ -0.27
HDLBP-226ENST00000453141 SYNJ2O15056 1496 aa13.39□□□□□ -0.27
HDLBP-226ENST00000453141 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
HDLBP-226ENST00000453141 PBRM1Q86U86 1689 aa13.39□□□□□ -0.27
HDLBP-226ENST00000453141 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
HDLBP-226ENST00000453141 SYNJ1O43426 1573 aa13.38□□□□□ -0.27
HDLBP-226ENST00000453141 CHMP7Q8WUX9 453 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-226ENST00000453141 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
HDLBP-226ENST00000453141 ARAP1Q96P48 1450 aa13.37□□□□□ -0.27
HDLBP-226ENST00000453141 CYB5RLQ6IPT4 315 aa13.36□□□□□ -0.27
HDLBP-226ENST00000453141 TOP2BQ02880 1626 aa13.35□□□□□ -0.27
HDLBP-226ENST00000453141 WRNQ14191 1432 aaPredicted RBP eCLIP13.35□□□□□ -0.27
HDLBP-226ENST00000453141 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
HDLBP-226ENST00000453141 ADAMTS12P58397 1594 aa13.28□□□□□ -0.28
HDLBP-226ENST00000453141 GRIN2AQ12879 1464 aa13.27□□□□□ -0.29
HDLBP-226ENST00000453141 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
HDLBP-226ENST00000453141 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
HDLBP-226ENST00000453141 CEP170Q5SW79 1584 aa13.21□□□□□ -0.29
HDLBP-226ENST00000453141 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-226ENST00000453141 NUP160Q12769 1436 aa13.21□□□□□ -0.3
HDLBP-226ENST00000453141 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
HDLBP-226ENST00000453141 SHROOM2Q13796 1616 aa13.16□□□□□ -0.3
HDLBP-226ENST00000453141 RUSC2Q8N2Y8 1516 aa13.09□□□□□ -0.31
HDLBP-226ENST00000453141 KIF27Q86VH2 1401 aa13.07□□□□□ -0.32
HDLBP-226ENST00000453141 PRG4Q92954 1404 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms