RNA–Protein interactions for RNA: ENST00000453137.1

ALK-203, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 3

Gene ALK, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-203ENST00000453137 NISCHQ9Y2I1 1504 aa38.13■■■■□ 3.69
ALK-203ENST00000453137 ABCC9O60706 1549 aa34.34■■■■□ 3.09
ALK-203ENST00000453137 CCDC180Q9P1Z9 1646 aa34.29■■■■□ 3.08
ALK-203ENST00000453137 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.82
ALK-203ENST00000453137 DNAJC5BQ9UF47 199 aa32.53■■■□□ 2.8
ALK-203ENST00000453137 NACADO15069 1562 aa32.45■■■□□ 2.78
ALK-203ENST00000453137 DCAF8L2P0C7V8 631 aa32.23■■■□□ 2.75
ALK-203ENST00000453137 MYO15BQ96JP2 1530 aa31.97■■■□□ 2.71
ALK-203ENST00000453137 PABPN1Q86U42 306 aaKnown RBP eCLIP31.94■■■□□ 2.7
ALK-203ENST00000453137 UNC13AQ9UPW8 1703 aa31.87■■■□□ 2.69
ALK-203ENST00000453137 BICRAQ9NZM4 1560 aa31.71■■■□□ 2.67
ALK-203ENST00000453137 ZCCHC6Q5VYS8 1495 aaKnown RBP31.59■■■□□ 2.65
ALK-203ENST00000453137 DCAF1Q9Y4B6 1507 aa31.53■■■□□ 2.64
ALK-203ENST00000453137 SHROOM4Q9ULL8 1493 aa31.34■■■□□ 2.61
ALK-203ENST00000453137 SCRIBQ14160 1630 aa31.2■■■□□ 2.59
ALK-203ENST00000453137 CC2D2AQ9P2K1 1620 aa31.02■■■□□ 2.56
ALK-203ENST00000453137 CECR2Q9BXF3 1484 aa30.97■■■□□ 2.55
ALK-203ENST00000453137 EIF4G1Q04637 1599 aaKnown RBP30.94■■■□□ 2.54
ALK-203ENST00000453137 DNAJC5Q9H3Z4 198 aa29.99■■■□□ 2.39
ALK-203ENST00000453137 NCAPD3P42695 1498 aa29.93■■■□□ 2.38
ALK-203ENST00000453137 ATAD2BQ9ULI0 1458 aa29.81■■■□□ 2.36
ALK-203ENST00000453137 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
ALK-203ENST00000453137 SMARCA4P51532 1647 aa29.77■■■□□ 2.36
ALK-203ENST00000453137 HMGXB3Q12766 1538 aa29.72■■■□□ 2.35
ALK-203ENST00000453137 ERCC6Q03468 1493 aa29.71■■■□□ 2.35
ALK-203ENST00000453137 CUX2O14529 1486 aa29.69■■■□□ 2.34
ALK-203ENST00000453137 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.34
ALK-203ENST00000453137 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
ALK-203ENST00000453137 PEG3Q9GZU2 1588 aa29.49■■■□□ 2.31
ALK-203ENST00000453137 NESP48681 1621 aa29.47■■■□□ 2.31
ALK-203ENST00000453137 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
ALK-203ENST00000453137 LAMC3Q9Y6N6 1575 aa29.3■■■□□ 2.28
ALK-203ENST00000453137 THOC2Q8NI27 1593 aaKnown RBP29.21■■■□□ 2.27
ALK-203ENST00000453137 PDS5BQ9NTI5 1447 aa29.14■■■□□ 2.26
ALK-203ENST00000453137 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
ALK-203ENST00000453137 CADPSQ9ULU8 1353 aa29.02■■■□□ 2.24
ALK-203ENST00000453137 WIZO95785 1651 aa28.99■■■□□ 2.23
ALK-203ENST00000453137 MRC2Q9UBG0 1479 aa28.88■■■□□ 2.21
ALK-203ENST00000453137 WDR62O43379 1518 aa28.79■■■□□ 2.2
ALK-203ENST00000453137 CEP164Q9UPV0 1460 aa28.76■■■□□ 2.19
ALK-203ENST00000453137 RSF1Q96T23 1441 aaPredicted RBP28.73■■■□□ 2.19
ALK-203ENST00000453137 FANCD2Q9BXW9 1451 aa28.7■■■□□ 2.18
ALK-203ENST00000453137 CFTRP13569 1480 aa28.67■■■□□ 2.18
ALK-203ENST00000453137 TOP2AP11388 1531 aaKnown RBP28.67■■■□□ 2.18
ALK-203ENST00000453137 TRIM41Q8WV44 630 aa28.48■■■□□ 2.15
ALK-203ENST00000453137 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
ALK-203ENST00000453137 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
ALK-203ENST00000453137 CCDC88BA6NC98 1476 aa28.31■■■□□ 2.12
ALK-203ENST00000453137 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
ALK-203ENST00000453137 IFT140Q96RY7 1462 aa28.17■■■□□ 2.1
ALK-203ENST00000453137 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
ALK-203ENST00000453137 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
ALK-203ENST00000453137 ZNF608Q9ULD9 1512 aaPredicted RBP28.09■■■□□ 2.09
ALK-203ENST00000453137 DNMBPQ6XZF7 1577 aa28.04■■■□□ 2.08
ALK-203ENST00000453137 EIF4G3O43432 1585 aaKnown RBP27.96■■■□□ 2.07
ALK-203ENST00000453137 RIMBP3CA6NJZ7 1639 aa27.95■■■□□ 2.06
ALK-203ENST00000453137 RIMBP3BA6NNM3 1639 aa27.95■■■□□ 2.06
ALK-203ENST00000453137 RIMBP3Q9UFD9 1639 aa27.95■■■□□ 2.06
ALK-203ENST00000453137 TARBP1Q13395 1621 aaKnown RBP27.88■■■□□ 2.05
ALK-203ENST00000453137 ARHGEF11O15085 1522 aa27.87■■■□□ 2.05
ALK-203ENST00000453137 POLA1P09884 1462 aaPredicted RBP27.84■■■□□ 2.05
ALK-203ENST00000453137 AQRO60306 1485 aaKnown RBP eCLIP27.83■■■□□ 2.05
ALK-203ENST00000453137 CHD1O14646 1710 aa27.75■■■□□ 2.03
ALK-203ENST00000453137 RAD54L2Q9Y4B4 1467 aa27.71■■■□□ 2.03
ALK-203ENST00000453137 SOGA1O94964 1423 aa27.71■■■□□ 2.03
ALK-203ENST00000453137 FBLN2P98095 1184 aa27.71■■■□□ 2.03
ALK-203ENST00000453137 FGD5Q6ZNL6 1462 aa27.65■■■□□ 2.02
ALK-203ENST00000453137 TDRD9Q8NDG6 1382 aaKnown RBP27.65■■■□□ 2.02
ALK-203ENST00000453137 WDR97A6NE52 1622 aa27.65■■■□□ 2.02
ALK-203ENST00000453137 CYB5RLQ6IPT4 315 aa27.63■■■□□ 2.01
ALK-203ENST00000453137 CUX1P39880 1505 aa27.6■■■□□ 2.01
ALK-203ENST00000453137 ARAP1Q96P48 1450 aa27.59■■■□□ 2.01
ALK-203ENST00000453137 SNAPC4Q5SXM2 1469 aa27.57■■■□□ 2
ALK-203ENST00000453137 MAGI1Q96QZ7 1491 aaPredicted RBP27.52■■■□□ 2
ALK-203ENST00000453137 GRIN2BQ13224 1484 aa27.51■■□□□ 1.99
ALK-203ENST00000453137 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
ALK-203ENST00000453137 SYNJ1O43426 1573 aa27.46■■□□□ 1.99
ALK-203ENST00000453137 CLASP1Q7Z460 1538 aa27.44■■□□□ 1.98
ALK-203ENST00000453137 SYNJ2O15056 1496 aa27.43■■□□□ 1.98
ALK-203ENST00000453137 SUPT5HO00267 1087 aaKnown RBP27.4■■□□□ 1.98
ALK-203ENST00000453137 GAPVD1Q14C86 1478 aa27.39■■□□□ 1.98
ALK-203ENST00000453137 TRHP20396 242 aaPredicted RBP27.37■■□□□ 1.97
ALK-203ENST00000453137 PBRM1Q86U86 1689 aa27.36■■□□□ 1.97
ALK-203ENST00000453137 ABCA10Q8WWZ4 1543 aa27.35■■□□□ 1.97
ALK-203ENST00000453137 ABCA5Q8WWZ7 1642 aa27.3■■□□□ 1.96
ALK-203ENST00000453137 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
ALK-203ENST00000453137 TOP2BQ02880 1626 aa27.16■■□□□ 1.94
ALK-203ENST00000453137 BIVM-ERCC5R4GMW8 1640 aa27.15■■□□□ 1.94
ALK-203ENST00000453137 GRIN2AQ12879 1464 aa27.14■■□□□ 1.94
ALK-203ENST00000453137 ADAMTS12P58397 1594 aa27.11■■□□□ 1.93
ALK-203ENST00000453137 FHAD1B1AJZ9 1412 aa27.05■■□□□ 1.92
ALK-203ENST00000453137 NUP160Q12769 1436 aa27.05■■□□□ 1.92
ALK-203ENST00000453137 ERICH3Q5RHP9 1530 aa27.02■■□□□ 1.92
ALK-203ENST00000453137 CEP170Q5SW79 1584 aa27.01■■□□□ 1.92
ALK-203ENST00000453137 ERCC6L2Q5T890 1561 aa27■■□□□ 1.91
ALK-203ENST00000453137 SHROOM2Q13796 1616 aa26.93■■□□□ 1.9
ALK-203ENST00000453137 PRG4Q92954 1404 aaPredicted RBP26.8■■□□□ 1.88
ALK-203ENST00000453137 JPH4Q96JJ6 628 aa26.76■■□□□ 1.87
ALK-203ENST00000453137 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
ALK-203ENST00000453137 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms