RNA–Protein interactions for RNA: ENST00000453113.6

GCA-206, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 652 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-206ENST00000453113 NISCHQ9Y2I1 1504 aa26.5■■□□□ 1.83
GCA-206ENST00000453113 CCDC180Q9P1Z9 1646 aa23.66■■□□□ 1.38
GCA-206ENST00000453113 ABCC9O60706 1549 aa23.08■■□□□ 1.29
GCA-206ENST00000453113 RB1CC1Q8TDY2 1594 aa22.24■■□□□ 1.15
GCA-206ENST00000453113 NACADO15069 1562 aa22.2■■□□□ 1.14
GCA-206ENST00000453113 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
GCA-206ENST00000453113 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
GCA-206ENST00000453113 DCAF8L2P0C7V8 631 aa22■■□□□ 1.11
GCA-206ENST00000453113 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
GCA-206ENST00000453113 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
GCA-206ENST00000453113 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
GCA-206ENST00000453113 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
GCA-206ENST00000453113 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
GCA-206ENST00000453113 SHROOM4Q9ULL8 1493 aa21.38■■□□□ 1.01
GCA-206ENST00000453113 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
GCA-206ENST00000453113 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
GCA-206ENST00000453113 CC2D2AQ9P2K1 1620 aa20.92■□□□□ 0.94
GCA-206ENST00000453113 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
GCA-206ENST00000453113 SMARCA4P51532 1647 aa20.61■□□□□ 0.89
GCA-206ENST00000453113 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
GCA-206ENST00000453113 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
GCA-206ENST00000453113 ATAD2BQ9ULI0 1458 aa20.46■□□□□ 0.87
GCA-206ENST00000453113 NCAPD3P42695 1498 aa20.44■□□□□ 0.86
GCA-206ENST00000453113 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
GCA-206ENST00000453113 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
GCA-206ENST00000453113 HMGXB3Q12766 1538 aa20.41■□□□□ 0.86
GCA-206ENST00000453113 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
GCA-206ENST00000453113 WIZO95785 1651 aa20.21■□□□□ 0.83
GCA-206ENST00000453113 RSF1Q96T23 1441 aaPredicted RBP20.14■□□□□ 0.81
GCA-206ENST00000453113 TOP2AP11388 1531 aaKnown RBP20.02■□□□□ 0.8
GCA-206ENST00000453113 NESP48681 1621 aa19.97■□□□□ 0.79
GCA-206ENST00000453113 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
GCA-206ENST00000453113 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
GCA-206ENST00000453113 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
GCA-206ENST00000453113 KIF21AQ7Z4S6 1674 aa19.79■□□□□ 0.76
GCA-206ENST00000453113 PDS5BQ9NTI5 1447 aa19.77■□□□□ 0.76
GCA-206ENST00000453113 THOC2Q8NI27 1593 aaKnown RBP19.75■□□□□ 0.75
GCA-206ENST00000453113 CUX2O14529 1486 aa19.74■□□□□ 0.75
GCA-206ENST00000453113 CFTRP13569 1480 aa19.73■□□□□ 0.75
GCA-206ENST00000453113 CCDC88BA6NC98 1476 aa19.72■□□□□ 0.75
GCA-206ENST00000453113 PRDM2Q13029 1718 aa19.69■□□□□ 0.74
GCA-206ENST00000453113 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
GCA-206ENST00000453113 CEP164Q9UPV0 1460 aa19.63■□□□□ 0.73
GCA-206ENST00000453113 MRC2Q9UBG0 1479 aa19.61■□□□□ 0.73
GCA-206ENST00000453113 WDR62O43379 1518 aa19.57■□□□□ 0.72
GCA-206ENST00000453113 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.72
GCA-206ENST00000453113 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
GCA-206ENST00000453113 DNMBPQ6XZF7 1577 aa19.33■□□□□ 0.69
GCA-206ENST00000453113 TOPBP1Q92547 1522 aa19.33■□□□□ 0.68
GCA-206ENST00000453113 ABCC8Q09428 1581 aa19.31■□□□□ 0.68
GCA-206ENST00000453113 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
GCA-206ENST00000453113 CUX1P39880 1505 aa19.17■□□□□ 0.66
GCA-206ENST00000453113 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
GCA-206ENST00000453113 TARBP1Q13395 1621 aaKnown RBP19.14■□□□□ 0.65
GCA-206ENST00000453113 ZNF608Q9ULD9 1512 aaPredicted RBP19.11■□□□□ 0.65
GCA-206ENST00000453113 FGD5Q6ZNL6 1462 aa19.11■□□□□ 0.65
GCA-206ENST00000453113 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
GCA-206ENST00000453113 DNAJC5Q9H3Z4 198 aa19.07■□□□□ 0.64
GCA-206ENST00000453113 RAD54L2Q9Y4B4 1467 aa19.04■□□□□ 0.64
GCA-206ENST00000453113 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
GCA-206ENST00000453113 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
GCA-206ENST00000453113 SOGA1O94964 1423 aa19.02■□□□□ 0.64
GCA-206ENST00000453113 TOP2BQ02880 1626 aa19.01■□□□□ 0.63
GCA-206ENST00000453113 SYNJ1O43426 1573 aa19.01■□□□□ 0.63
GCA-206ENST00000453113 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
GCA-206ENST00000453113 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.63
GCA-206ENST00000453113 ABCA10Q8WWZ4 1543 aa18.92■□□□□ 0.62
GCA-206ENST00000453113 TDRD9Q8NDG6 1382 aaKnown RBP18.91■□□□□ 0.62
GCA-206ENST00000453113 ABCA5Q8WWZ7 1642 aa18.9■□□□□ 0.62
GCA-206ENST00000453113 PBRM1Q86U86 1689 aa18.88■□□□□ 0.61
GCA-206ENST00000453113 CHD1O14646 1710 aa18.86■□□□□ 0.61
GCA-206ENST00000453113 GRIN2BQ13224 1484 aa18.85■□□□□ 0.61
GCA-206ENST00000453113 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
GCA-206ENST00000453113 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
GCA-206ENST00000453113 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.6
GCA-206ENST00000453113 OSCARQ8IYS5 282 aa18.8■□□□□ 0.6
GCA-206ENST00000453113 SYNJ2O15056 1496 aa18.74■□□□□ 0.59
GCA-206ENST00000453113 ADAMTS12P58397 1594 aa18.72■□□□□ 0.59
GCA-206ENST00000453113 ERICH3Q5RHP9 1530 aa18.71■□□□□ 0.59
GCA-206ENST00000453113 FBLN2P98095 1184 aa18.69■□□□□ 0.58
GCA-206ENST00000453113 CLASP1Q7Z460 1538 aa18.65■□□□□ 0.58
GCA-206ENST00000453113 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
GCA-206ENST00000453113 GRIN2AQ12879 1464 aa18.63■□□□□ 0.57
GCA-206ENST00000453113 RIMBP3CA6NJZ7 1639 aa18.63■□□□□ 0.57
GCA-206ENST00000453113 RIMBP3BA6NNM3 1639 aa18.63■□□□□ 0.57
GCA-206ENST00000453113 RIMBP3Q9UFD9 1639 aa18.63■□□□□ 0.57
GCA-206ENST00000453113 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
GCA-206ENST00000453113 ARHGEF11O15085 1522 aa18.61■□□□□ 0.57
GCA-206ENST00000453113 KIF27Q86VH2 1401 aa18.6■□□□□ 0.57
GCA-206ENST00000453113 CUL7Q14999 1698 aa18.57■□□□□ 0.56
GCA-206ENST00000453113 CEP170Q5SW79 1584 aa18.55■□□□□ 0.56
GCA-206ENST00000453113 NUP160Q12769 1436 aa18.54■□□□□ 0.56
GCA-206ENST00000453113 IGF1RP08069 1367 aa18.49■□□□□ 0.55
GCA-206ENST00000453113 RUSC2Q8N2Y8 1516 aa18.46■□□□□ 0.55
GCA-206ENST00000453113 ARAP1Q96P48 1450 aa18.46■□□□□ 0.54
GCA-206ENST00000453113 SHROOM2Q13796 1616 aa18.45■□□□□ 0.54
GCA-206ENST00000453113 TRIM41Q8WV44 630 aa18.44■□□□□ 0.54
GCA-206ENST00000453113 CARMIL1Q5VZK9 1371 aa18.39■□□□□ 0.53
GCA-206ENST00000453113 ERCC6L2Q5T890 1561 aa18.36■□□□□ 0.53
GCA-206ENST00000453113 KIAA0586Q9BVV6 1533 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms