RNA–Protein interactions for RNA: ENST00000453081.5

TRO-218, Transcript of trophinin, humanhuman

TSL 4

Gene TRO, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-218ENST00000453081 NISCHQ9Y2I1 1504 aa29.94■■■□□ 2.38
TRO-218ENST00000453081 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
TRO-218ENST00000453081 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
TRO-218ENST00000453081 DCAF1Q9Y4B6 1507 aa24.86■■□□□ 1.57
TRO-218ENST00000453081 DCAF8L2P0C7V8 631 aa24.69■■□□□ 1.54
TRO-218ENST00000453081 MYO15BQ96JP2 1530 aa24.58■■□□□ 1.53
TRO-218ENST00000453081 ABCC9O60706 1549 aa24.51■■□□□ 1.51
TRO-218ENST00000453081 NACADO15069 1562 aa24.35■■□□□ 1.49
TRO-218ENST00000453081 SHROOM4Q9ULL8 1493 aa24.34■■□□□ 1.49
TRO-218ENST00000453081 RB1CC1Q8TDY2 1594 aa24.11■■□□□ 1.45
TRO-218ENST00000453081 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
TRO-218ENST00000453081 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
TRO-218ENST00000453081 UNC13AQ9UPW8 1703 aa23.36■■□□□ 1.33
TRO-218ENST00000453081 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
TRO-218ENST00000453081 BICRAQ9NZM4 1560 aa23.2■■□□□ 1.3
TRO-218ENST00000453081 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
TRO-218ENST00000453081 CECR2Q9BXF3 1484 aa23.14■■□□□ 1.29
TRO-218ENST00000453081 PABPN1Q86U42 306 aaKnown RBP eCLIP23.12■■□□□ 1.29
TRO-218ENST00000453081 MROH2BQ7Z745 1585 aa23.05■■□□□ 1.28
TRO-218ENST00000453081 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
TRO-218ENST00000453081 WIZO95785 1651 aa22.83■■□□□ 1.24
TRO-218ENST00000453081 PEG3Q9GZU2 1588 aa22.74■■□□□ 1.23
TRO-218ENST00000453081 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
TRO-218ENST00000453081 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
TRO-218ENST00000453081 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
TRO-218ENST00000453081 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
TRO-218ENST00000453081 EIF4G1Q04637 1599 aaKnown RBP22.57■■□□□ 1.2
TRO-218ENST00000453081 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
TRO-218ENST00000453081 CCDC88BA6NC98 1476 aa22.45■■□□□ 1.18
TRO-218ENST00000453081 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
TRO-218ENST00000453081 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
TRO-218ENST00000453081 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
TRO-218ENST00000453081 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
TRO-218ENST00000453081 CFTRP13569 1480 aa21.95■■□□□ 1.1
TRO-218ENST00000453081 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
TRO-218ENST00000453081 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
TRO-218ENST00000453081 CADPSQ9ULU8 1353 aa21.88■■□□□ 1.09
TRO-218ENST00000453081 EEA1Q15075 1411 aa21.8■■□□□ 1.08
TRO-218ENST00000453081 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
TRO-218ENST00000453081 TOP2BQ02880 1626 aa21.7■■□□□ 1.06
TRO-218ENST00000453081 FAM9AQ8IZU1 332 aaPredicted RBP21.7■■□□□ 1.06
TRO-218ENST00000453081 SYNJ1O43426 1573 aa21.7■■□□□ 1.06
TRO-218ENST00000453081 LAMC3Q9Y6N6 1575 aa21.68■■□□□ 1.06
TRO-218ENST00000453081 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
TRO-218ENST00000453081 LOC105371045A0A1W2PR82 267 aa21.65■■□□□ 1.06
TRO-218ENST00000453081 FANCD2Q9BXW9 1451 aa21.6■■□□□ 1.05
TRO-218ENST00000453081 PDS5BQ9NTI5 1447 aa21.57■■□□□ 1.04
TRO-218ENST00000453081 CSRNP3Q8WYN3 585 aa21.57■■□□□ 1.04
TRO-218ENST00000453081 SOGA1O94964 1423 aa21.56■■□□□ 1.04
TRO-218ENST00000453081 CUX1P39880 1505 aa21.55■■□□□ 1.04
TRO-218ENST00000453081 CEP164Q9UPV0 1460 aa21.48■■□□□ 1.03
TRO-218ENST00000453081 NESP48681 1621 aa21.47■■□□□ 1.03
TRO-218ENST00000453081 DNAJC5BQ9UF47 199 aa21.43■■□□□ 1.02
TRO-218ENST00000453081 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
TRO-218ENST00000453081 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
TRO-218ENST00000453081 RUSC2Q8N2Y8 1516 aa21.4■■□□□ 1.02
TRO-218ENST00000453081 GOLGA3Q08378 1498 aa21.39■■□□□ 1.02
TRO-218ENST00000453081 KIF21BO75037 1637 aa21.36■■□□□ 1.01
TRO-218ENST00000453081 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
TRO-218ENST00000453081 FGD5Q6ZNL6 1462 aa21.35■■□□□ 1.01
TRO-218ENST00000453081 TOPBP1Q92547 1522 aa21.34■■□□□ 1.01
TRO-218ENST00000453081 UBTFP17480 764 aaKnown RBP21.3■■□□□ 1
TRO-218ENST00000453081 EHMT2Q96KQ7 1210 aa21.29■■□□□ 1
TRO-218ENST00000453081 CUX2O14529 1486 aa21.26■□□□□ 0.99
TRO-218ENST00000453081 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
TRO-218ENST00000453081 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
TRO-218ENST00000453081 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
TRO-218ENST00000453081 ABCA10Q8WWZ4 1543 aa21.22■□□□□ 0.99
TRO-218ENST00000453081 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
TRO-218ENST00000453081 PRXQ9BXM0 1461 aa21.21■□□□□ 0.99
TRO-218ENST00000453081 MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
TRO-218ENST00000453081 CEP162Q5TB80 1403 aa21.17■□□□□ 0.98
TRO-218ENST00000453081 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.98
TRO-218ENST00000453081 IGF1RP08069 1367 aa21.14■□□□□ 0.98
TRO-218ENST00000453081 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
TRO-218ENST00000453081 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
TRO-218ENST00000453081 CARMIL1Q5VZK9 1371 aa21.08■□□□□ 0.96
TRO-218ENST00000453081 WDR62O43379 1518 aa21.05■□□□□ 0.96
TRO-218ENST00000453081 WDR97A6NE52 1622 aa21.03■□□□□ 0.96
TRO-218ENST00000453081 CLIP1P30622 1438 aa21.03■□□□□ 0.96
TRO-218ENST00000453081 CUL7Q14999 1698 aa21.02■□□□□ 0.95
TRO-218ENST00000453081 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
TRO-218ENST00000453081 GAPVD1Q14C86 1478 aa21■□□□□ 0.95
TRO-218ENST00000453081 TARBP1Q13395 1621 aaKnown RBP20.98■□□□□ 0.95
TRO-218ENST00000453081 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
TRO-218ENST00000453081 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
TRO-218ENST00000453081 TRIM26Q12899 539 aaPredicted RBP20.94■□□□□ 0.94
TRO-218ENST00000453081 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.94
TRO-218ENST00000453081 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
TRO-218ENST00000453081 GRIN2BQ13224 1484 aa20.86■□□□□ 0.93
TRO-218ENST00000453081 FHAD1B1AJZ9 1412 aa20.82■□□□□ 0.92
TRO-218ENST00000453081 APLP2Q06481 763 aa20.82■□□□□ 0.92
TRO-218ENST00000453081 PCGF6Q9BYE7 350 aa20.82■□□□□ 0.92
TRO-218ENST00000453081 AQRO60306 1485 aaKnown RBP eCLIP20.78■□□□□ 0.92
TRO-218ENST00000453081 PBRM1Q86U86 1689 aa20.77■□□□□ 0.92
TRO-218ENST00000453081 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
TRO-218ENST00000453081 ARAP1Q96P48 1450 aa20.72■□□□□ 0.91
TRO-218ENST00000453081 ARHGAP35Q9NRY4 1499 aa20.72■□□□□ 0.91
TRO-218ENST00000453081 EFCAB5A4FU69 1503 aa20.72■□□□□ 0.91
TRO-218ENST00000453081 ZNF608Q9ULD9 1512 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms