RNA–Protein interactions for RNA: ENST00000452917.2

SETD1A-202, Transcript of SET domain containing 1A, humanhuman

TSL 2

Gene SETD1A, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-202ENST00000452917 NISCHQ9Y2I1 1504 aa54.65■■■■■ 6.34
SETD1A-202ENST00000452917 CCDC180Q9P1Z9 1646 aa48.95■■■■■ 5.43
SETD1A-202ENST00000452917 ABCC9O60706 1549 aa48.78■■■■■ 5.4
SETD1A-202ENST00000452917 RB1CC1Q8TDY2 1594 aa46.51■■■■■ 5.04
SETD1A-202ENST00000452917 NACADO15069 1562 aa46.23■■■■■ 4.99
SETD1A-202ENST00000452917 DCAF8L2P0C7V8 631 aa46.09■■■■■ 4.97
SETD1A-202ENST00000452917 DNAJC5BQ9UF47 199 aa45.65■■■■■ 4.9
SETD1A-202ENST00000452917 MYO15BQ96JP2 1530 aa45.64■■■■■ 4.9
SETD1A-202ENST00000452917 UNC13AQ9UPW8 1703 aa45.55■■■■■ 4.88
SETD1A-202ENST00000452917 PABPN1Q86U42 306 aaKnown RBP eCLIP45.47■■■■■ 4.87
SETD1A-202ENST00000452917 ZCCHC6Q5VYS8 1495 aaKnown RBP45.29■■■■■ 4.84
SETD1A-202ENST00000452917 BICRAQ9NZM4 1560 aa45.17■■■■■ 4.82
SETD1A-202ENST00000452917 DCAF1Q9Y4B6 1507 aa45.13■■■■■ 4.82
SETD1A-202ENST00000452917 SCRIBQ14160 1630 aa44.61■■■■■ 4.73
SETD1A-202ENST00000452917 SHROOM4Q9ULL8 1493 aa44.51■■■■■ 4.72
SETD1A-202ENST00000452917 CC2D2AQ9P2K1 1620 aa44.1■■■■■ 4.65
SETD1A-202ENST00000452917 EIF4G1Q04637 1599 aaKnown RBP44.02■■■■■ 4.64
SETD1A-202ENST00000452917 CECR2Q9BXF3 1484 aa43.91■■■■■ 4.62
SETD1A-202ENST00000452917 NCAPD3P42695 1498 aa42.68■■■■■ 4.42
SETD1A-202ENST00000452917 SMARCA4P51532 1647 aa42.59■■■■■ 4.41
SETD1A-202ENST00000452917 ATAD2BQ9ULI0 1458 aa42.58■■■■■ 4.41
SETD1A-202ENST00000452917 SMARCA2P51531 1590 aa42.46■■■■■ 4.39
SETD1A-202ENST00000452917 BAZ1AQ9NRL2 1556 aaPredicted RBP42.39■■■■■ 4.38
SETD1A-202ENST00000452917 HMGXB3Q12766 1538 aa42.36■■■■■ 4.37
SETD1A-202ENST00000452917 BAZ1BQ9UIG0 1483 aaKnown RBP42.17■■■■■ 4.34
SETD1A-202ENST00000452917 PEG3Q9GZU2 1588 aa42.16■■■■■ 4.34
SETD1A-202ENST00000452917 MROH2BQ7Z745 1585 aa42.11■■■■■ 4.33
SETD1A-202ENST00000452917 ERCC6Q03468 1493 aa42.08■■■■■ 4.33
SETD1A-202ENST00000452917 NESP48681 1621 aa41.97■■■■■ 4.31
SETD1A-202ENST00000452917 CUX2O14529 1486 aa41.94■■■■■ 4.3
SETD1A-202ENST00000452917 DNAJC5Q9H3Z4 198 aa41.77■■■■■ 4.28
SETD1A-202ENST00000452917 LAMC3Q9Y6N6 1575 aa41.69■■■■■ 4.26
SETD1A-202ENST00000452917 WIZO95785 1651 aa41.65■■■■■ 4.26
SETD1A-202ENST00000452917 THOC2Q8NI27 1593 aaKnown RBP41.49■■■■■ 4.23
SETD1A-202ENST00000452917 KIF21AQ7Z4S6 1674 aa41.46■■■■■ 4.23
SETD1A-202ENST00000452917 PDS5BQ9NTI5 1447 aa41.44■■■■■ 4.23
SETD1A-202ENST00000452917 CADPSQ9ULU8 1353 aa41.4■■■■■ 4.22
SETD1A-202ENST00000452917 RSF1Q96T23 1441 aaPredicted RBP41.3■■■■■ 4.2
SETD1A-202ENST00000452917 TOP2AP11388 1531 aaKnown RBP41.08■■■■■ 4.17
SETD1A-202ENST00000452917 MRC2Q9UBG0 1479 aa41.06■■■■■ 4.16
SETD1A-202ENST00000452917 CFTRP13569 1480 aa40.96■■■■■ 4.15
SETD1A-202ENST00000452917 WDR62O43379 1518 aa40.95■■■■■ 4.15
SETD1A-202ENST00000452917 CEP164Q9UPV0 1460 aa40.94■■■■■ 4.14
SETD1A-202ENST00000452917 FANCD2Q9BXW9 1451 aa40.92■■■■■ 4.14
SETD1A-202ENST00000452917 CCDC88BA6NC98 1476 aa40.64■■■■■ 4.1
SETD1A-202ENST00000452917 PRDM2Q13029 1718 aa40.63■■■■■ 4.09
SETD1A-202ENST00000452917 URB2Q14146 1524 aaKnown RBP40.57■■■■■ 4.09
SETD1A-202ENST00000452917 TOPBP1Q92547 1522 aa40.17■■■■■ 4.02
SETD1A-202ENST00000452917 OSCARQ8IYS5 282 aa40.11■■■■■ 4.01
SETD1A-202ENST00000452917 IFT140Q96RY7 1462 aa40.11■■■■■ 4.01
SETD1A-202ENST00000452917 ABCC8Q09428 1581 aa40.1■■■■■ 4.01
SETD1A-202ENST00000452917 ZNF608Q9ULD9 1512 aaPredicted RBP40.05■■■■■ 4
SETD1A-202ENST00000452917 DNMBPQ6XZF7 1577 aa40.03■■■■■ 4
SETD1A-202ENST00000452917 TRIM41Q8WV44 630 aa40.01■■■■■ 4
SETD1A-202ENST00000452917 EIF4G3O43432 1585 aaKnown RBP39.83■■■■□ 3.97
SETD1A-202ENST00000452917 TARBP1Q13395 1621 aaKnown RBP39.82■■■■□ 3.96
SETD1A-202ENST00000452917 POLA1P09884 1462 aaPredicted RBP39.76■■■■□ 3.96
SETD1A-202ENST00000452917 AQRO60306 1485 aaKnown RBP eCLIP39.73■■■■□ 3.959e-8■■■■■ 30.5
SETD1A-202ENST00000452917 SUPT5HO00267 1087 aaKnown RBP39.65■■■■□ 3.94
SETD1A-202ENST00000452917 RAD54L2Q9Y4B4 1467 aa39.64■■■■□ 3.94
SETD1A-202ENST00000452917 SOGA1O94964 1423 aa39.61■■■■□ 3.93
SETD1A-202ENST00000452917 RIMBP3CA6NJZ7 1639 aa39.56■■■■□ 3.92
SETD1A-202ENST00000452917 RIMBP3BA6NNM3 1639 aa39.56■■■■□ 3.92
SETD1A-202ENST00000452917 RIMBP3Q9UFD9 1639 aa39.56■■■■□ 3.92
SETD1A-202ENST00000452917 CUX1P39880 1505 aa39.55■■■■□ 3.92
SETD1A-202ENST00000452917 CHD1O14646 1710 aa39.55■■■■□ 3.92
SETD1A-202ENST00000452917 FGD5Q6ZNL6 1462 aa39.55■■■■□ 3.92
SETD1A-202ENST00000452917 TDRD9Q8NDG6 1382 aaKnown RBP39.5■■■■□ 3.91
SETD1A-202ENST00000452917 FBLN2P98095 1184 aa39.44■■■■□ 3.9
SETD1A-202ENST00000452917 ARHGEF11O15085 1522 aa39.43■■■■□ 3.9
SETD1A-202ENST00000452917 WDR97A6NE52 1622 aa39.4■■■■□ 3.9
SETD1A-202ENST00000452917 SNAPC4Q5SXM2 1469 aa39.3■■■■□ 3.88
SETD1A-202ENST00000452917 GRIN2BQ13224 1484 aa39.22■■■■□ 3.87
SETD1A-202ENST00000452917 MAGI1Q96QZ7 1491 aaPredicted RBP39.2■■■■□ 3.87
SETD1A-202ENST00000452917 CYB5RLQ6IPT4 315 aa39.17■■■■□ 3.86
SETD1A-202ENST00000452917 CHMP7Q8WUX9 453 aaPredicted RBP39.17■■■■□ 3.86
SETD1A-202ENST00000452917 PBRM1Q86U86 1689 aa39.13■■■■□ 3.85
SETD1A-202ENST00000452917 GAPVD1Q14C86 1478 aa39.12■■■■□ 3.85
SETD1A-202ENST00000452917 ABCA10Q8WWZ4 1543 aa39.11■■■■□ 3.85
SETD1A-202ENST00000452917 SYNJ2O15056 1496 aa39.07■■■■□ 3.85
SETD1A-202ENST00000452917 ARAP1Q96P48 1450 aa39.05■■■■□ 3.84
SETD1A-202ENST00000452917 CLASP1Q7Z460 1538 aa39.05■■■■□ 3.84
SETD1A-202ENST00000452917 SYNJ1O43426 1573 aa39.04■■■■□ 3.84
SETD1A-202ENST00000452917 ABCA5Q8WWZ7 1642 aa39.03■■■■□ 3.84
SETD1A-202ENST00000452917 WRNQ14191 1432 aaPredicted RBP eCLIP38.98■■■■□ 3.83
SETD1A-202ENST00000452917 BIVM-ERCC5R4GMW8 1640 aa38.98■■■■□ 3.83
SETD1A-202ENST00000452917 TOP2BQ02880 1626 aa38.97■■■■□ 3.83
SETD1A-202ENST00000452917 GRIN2AQ12879 1464 aa38.72■■■■□ 3.79
SETD1A-202ENST00000452917 ADAMTS12P58397 1594 aa38.71■■■■□ 3.79
SETD1A-202ENST00000452917 TRHP20396 242 aaPredicted RBP38.67■■■■□ 3.78
SETD1A-202ENST00000452917 ERICH3Q5RHP9 1530 aa38.62■■■■□ 3.77
SETD1A-202ENST00000452917 FHAD1B1AJZ9 1412 aa38.62■■■■□ 3.77
SETD1A-202ENST00000452917 CEP170Q5SW79 1584 aa38.59■■■■□ 3.77
SETD1A-202ENST00000452917 NUP160Q12769 1436 aa38.58■■■■□ 3.77
SETD1A-202ENST00000452917 ERCC6L2Q5T890 1561 aa38.48■■■■□ 3.75
SETD1A-202ENST00000452917 SHROOM2Q13796 1616 aa38.41■■■■□ 3.74
SETD1A-202ENST00000452917 JPH4Q96JJ6 628 aa38.24■■■■□ 3.71
SETD1A-202ENST00000452917 PRG4Q92954 1404 aaPredicted RBP38.21■■■■□ 3.71
SETD1A-202ENST00000452917 KIF27Q86VH2 1401 aa38.2■■■■□ 3.71
SETD1A-202ENST00000452917 IGF1RP08069 1367 aa38.19■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms