RNA–Protein interactions for RNA: ENST00000452101.1

SPEG-213, Transcript of SPEG complex locus, humanhuman

TSL 4

Gene SPEG, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-213ENST00000452101 NISCHQ9Y2I1 1504 aa48.58■■■■■ 5.37
SPEG-213ENST00000452101 CCDC180Q9P1Z9 1646 aa43.45■■■■■ 4.55
SPEG-213ENST00000452101 ABCC9O60706 1549 aa42.74■■■■■ 4.43
SPEG-213ENST00000452101 RB1CC1Q8TDY2 1594 aa40.99■■■■■ 4.15
SPEG-213ENST00000452101 NACADO15069 1562 aa40.87■■■■■ 4.13
SPEG-213ENST00000452101 MYO15BQ96JP2 1530 aa40.56■■■■■ 4.08
SPEG-213ENST00000452101 DCAF8L2P0C7V8 631 aa40.45■■■■■ 4.07
SPEG-213ENST00000452101 ZCCHC6Q5VYS8 1495 aaKnown RBP40.41■■■■■ 4.06
SPEG-213ENST00000452101 UNC13AQ9UPW8 1703 aa40.25■■■■■ 4.03
SPEG-213ENST00000452101 DCAF1Q9Y4B6 1507 aa40.23■■■■■ 4.03
SPEG-213ENST00000452101 BICRAQ9NZM4 1560 aa39.89■■■■□ 3.98
SPEG-213ENST00000452101 PABPN1Q86U42 306 aaKnown RBP eCLIP39.81■■■■□ 3.96
SPEG-213ENST00000452101 DNAJC5BQ9UF47 199 aa39.67■■■■□ 3.94
SPEG-213ENST00000452101 SCRIBQ14160 1630 aa39.51■■■■□ 3.91
SPEG-213ENST00000452101 SHROOM4Q9ULL8 1493 aa39.37■■■■□ 3.89
SPEG-213ENST00000452101 EIF4G1Q04637 1599 aaKnown RBP38.79■■■■□ 3.8
SPEG-213ENST00000452101 CC2D2AQ9P2K1 1620 aa38.74■■■■□ 3.79
SPEG-213ENST00000452101 CECR2Q9BXF3 1484 aa38.46■■■■□ 3.75
SPEG-213ENST00000452101 SMARCA4P51532 1647 aa37.81■■■■□ 3.64
SPEG-213ENST00000452101 NCAPD3P42695 1498 aa37.72■■■■□ 3.63
SPEG-213ENST00000452101 ATAD2BQ9ULI0 1458 aa37.66■■■■□ 3.62
SPEG-213ENST00000452101 BAZ1AQ9NRL2 1556 aaPredicted RBP37.65■■■■□ 3.62
SPEG-213ENST00000452101 SMARCA2P51531 1590 aa37.59■■■■□ 3.61
SPEG-213ENST00000452101 HMGXB3Q12766 1538 aa37.52■■■■□ 3.6
SPEG-213ENST00000452101 PEG3Q9GZU2 1588 aa37.51■■■■□ 3.59
SPEG-213ENST00000452101 MROH2BQ7Z745 1585 aa37.44■■■■□ 3.58
SPEG-213ENST00000452101 BAZ1BQ9UIG0 1483 aaKnown RBP37.27■■■■□ 3.56
SPEG-213ENST00000452101 WIZO95785 1651 aa37.03■■■■□ 3.52
SPEG-213ENST00000452101 NESP48681 1621 aa36.93■■■■□ 3.5
SPEG-213ENST00000452101 RSF1Q96T23 1441 aaPredicted RBP36.84■■■■□ 3.49
SPEG-213ENST00000452101 ERCC6Q03468 1493 aa36.8■■■■□ 3.48
SPEG-213ENST00000452101 LAMC3Q9Y6N6 1575 aa36.79■■■■□ 3.48
SPEG-213ENST00000452101 CUX2O14529 1486 aa36.67■■■■□ 3.46
SPEG-213ENST00000452101 TOP2AP11388 1531 aaKnown RBP36.59■■■■□ 3.45
SPEG-213ENST00000452101 KIF21AQ7Z4S6 1674 aa36.56■■■■□ 3.44
SPEG-213ENST00000452101 THOC2Q8NI27 1593 aaKnown RBP36.54■■■■□ 3.44
SPEG-213ENST00000452101 CADPSQ9ULU8 1353 aa36.53■■■■□ 3.44
SPEG-213ENST00000452101 PDS5BQ9NTI5 1447 aa36.45■■■■□ 3.43
SPEG-213ENST00000452101 CFTRP13569 1480 aa36.3■■■■□ 3.4
SPEG-213ENST00000452101 MRC2Q9UBG0 1479 aa36.16■■■■□ 3.38
SPEG-213ENST00000452101 CCDC88BA6NC98 1476 aa36.13■■■■□ 3.37
SPEG-213ENST00000452101 WDR62O43379 1518 aa36.13■■■■□ 3.37
SPEG-213ENST00000452101 FANCD2Q9BXW9 1451 aa36.12■■■■□ 3.37
SPEG-213ENST00000452101 PRDM2Q13029 1718 aa36.11■■■■□ 3.37
SPEG-213ENST00000452101 CEP164Q9UPV0 1460 aa36.11■■■■□ 3.37
SPEG-213ENST00000452101 DNAJC5Q9H3Z4 198 aa35.99■■■■□ 3.35
SPEG-213ENST00000452101 URB2Q14146 1524 aaKnown RBP35.85■■■■□ 3.33
SPEG-213ENST00000452101 TOPBP1Q92547 1522 aa35.54■■■■□ 3.28
SPEG-213ENST00000452101 DNMBPQ6XZF7 1577 aa35.47■■■■□ 3.27
SPEG-213ENST00000452101 ABCC8Q09428 1581 aa35.47■■■■□ 3.27
SPEG-213ENST00000452101 IFT140Q96RY7 1462 aa35.38■■■■□ 3.25
SPEG-213ENST00000452101 SUPT5HO00267 1087 aaKnown RBP35.38■■■■□ 3.25
SPEG-213ENST00000452101 ZNF608Q9ULD9 1512 aaPredicted RBP35.3■■■■□ 3.24
SPEG-213ENST00000452101 TARBP1Q13395 1621 aaKnown RBP35.27■■■■□ 3.24
SPEG-213ENST00000452101 POLA1P09884 1462 aaPredicted RBP35.22■■■■□ 3.23
SPEG-213ENST00000452101 EIF4G3O43432 1585 aaKnown RBP35.17■■■■□ 3.22
SPEG-213ENST00000452101 CUX1P39880 1505 aa35.15■■■■□ 3.22
SPEG-213ENST00000452101 FGD5Q6ZNL6 1462 aa35.04■■■■□ 3.2
SPEG-213ENST00000452101 RAD54L2Q9Y4B4 1467 aa35.03■■■■□ 3.2
SPEG-213ENST00000452101 AQRO60306 1485 aaKnown RBP eCLIP34.99■■■■□ 3.192e-7■■■■■ 32.6
SPEG-213ENST00000452101 SOGA1O94964 1423 aa34.98■■■■□ 3.19
SPEG-213ENST00000452101 OSCARQ8IYS5 282 aa34.97■■■■□ 3.19
SPEG-213ENST00000452101 WDR97A6NE52 1622 aa34.92■■■■□ 3.18
SPEG-213ENST00000452101 CHD1O14646 1710 aa34.84■■■■□ 3.17
SPEG-213ENST00000452101 TDRD9Q8NDG6 1382 aaKnown RBP34.83■■■■□ 3.17
SPEG-213ENST00000452101 BIVM-ERCC5R4GMW8 1640 aa34.79■■■■□ 3.16
SPEG-213ENST00000452101 TOP2BQ02880 1626 aa34.75■■■■□ 3.15
SPEG-213ENST00000452101 SYNJ1O43426 1573 aa34.72■■■■□ 3.15
SPEG-213ENST00000452101 ABCA10Q8WWZ4 1543 aa34.71■■■■□ 3.15
SPEG-213ENST00000452101 WRNQ14191 1432 aaPredicted RBP eCLIP34.68■■■■□ 3.14
SPEG-213ENST00000452101 ABCA5Q8WWZ7 1642 aa34.68■■■■□ 3.14
SPEG-213ENST00000452101 PBRM1Q86U86 1689 aa34.66■■■■□ 3.14
SPEG-213ENST00000452101 SNAPC4Q5SXM2 1469 aa34.66■■■■□ 3.14
SPEG-213ENST00000452101 GRIN2BQ13224 1484 aa34.65■■■■□ 3.14
SPEG-213ENST00000452101 MAGI1Q96QZ7 1491 aaPredicted RBP34.63■■■■□ 3.13
SPEG-213ENST00000452101 RIMBP3CA6NJZ7 1639 aa34.61■■■■□ 3.13
SPEG-213ENST00000452101 RIMBP3BA6NNM3 1639 aa34.61■■■■□ 3.13
SPEG-213ENST00000452101 RIMBP3Q9UFD9 1639 aa34.61■■■■□ 3.13
SPEG-213ENST00000452101 GAPVD1Q14C86 1478 aa34.59■■■■□ 3.13
SPEG-213ENST00000452101 ARHGEF11O15085 1522 aa34.52■■■■□ 3.12
SPEG-213ENST00000452101 SYNJ2O15056 1496 aa34.5■■■■□ 3.11
SPEG-213ENST00000452101 FBLN2P98095 1184 aa34.48■■■■□ 3.11
SPEG-213ENST00000452101 TRIM41Q8WV44 630 aa34.47■■■■□ 3.11
SPEG-213ENST00000452101 CLASP1Q7Z460 1538 aa34.45■■■■□ 3.1
SPEG-213ENST00000452101 CHMP7Q8WUX9 453 aaPredicted RBP34.38■■■■□ 3.09
SPEG-213ENST00000452101 ADAMTS12P58397 1594 aa34.33■■■■□ 3.09
SPEG-213ENST00000452101 ERICH3Q5RHP9 1530 aa34.29■■■■□ 3.08
SPEG-213ENST00000452101 GRIN2AQ12879 1464 aa34.23■■■■□ 3.07
SPEG-213ENST00000452101 ARAP1Q96P48 1450 aa34.23■■■■□ 3.07
SPEG-213ENST00000452101 FHAD1B1AJZ9 1412 aa34.18■■■■□ 3.06
SPEG-213ENST00000452101 CEP170Q5SW79 1584 aa34.14■■■■□ 3.06
SPEG-213ENST00000452101 NUP160Q12769 1436 aa34.13■■■■□ 3.05
SPEG-213ENST00000452101 CYB5RLQ6IPT4 315 aa34.08■■■■□ 3.05
SPEG-213ENST00000452101 SHROOM2Q13796 1616 aa34.01■■■■□ 3.03
SPEG-213ENST00000452101 KIF27Q86VH2 1401 aa33.96■■■■□ 3.03
SPEG-213ENST00000452101 IGF1RP08069 1367 aa33.93■■■■□ 3.02
SPEG-213ENST00000452101 ERCC6L2Q5T890 1561 aa33.93■■■■□ 3.02
SPEG-213ENST00000452101 CUL7Q14999 1698 aa33.91■■■■□ 3.02
SPEG-213ENST00000452101 RUSC2Q8N2Y8 1516 aa33.86■■■■□ 3.01
SPEG-213ENST00000452101 PRG4Q92954 1404 aaPredicted RBP33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms