RNA–Protein interactions for RNA: ENST00000451891.4

PRPH-202, Transcript of peripherin, humanhuman

TSL 5

Gene PRPH, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH-202ENST00000451891 NISCHQ9Y2I1 1504 aa55.03■■■■■ 6.4
PRPH-202ENST00000451891 CCDC180Q9P1Z9 1646 aa48.94■■■■■ 5.42
PRPH-202ENST00000451891 ABCC9O60706 1549 aa48.02■■■■■ 5.28
PRPH-202ENST00000451891 RB1CC1Q8TDY2 1594 aa46.09■■■■■ 4.97
PRPH-202ENST00000451891 DCAF8L2P0C7V8 631 aa46.05■■■■■ 4.96
PRPH-202ENST00000451891 NACADO15069 1562 aa46■■■■■ 4.95
PRPH-202ENST00000451891 ZCCHC6Q5VYS8 1495 aaKnown RBP45.83■■■■■ 4.93
PRPH-202ENST00000451891 MYO15BQ96JP2 1530 aa45.67■■■■■ 4.9
PRPH-202ENST00000451891 DCAF1Q9Y4B6 1507 aa45.47■■■■■ 4.87
PRPH-202ENST00000451891 UNC13AQ9UPW8 1703 aa45.11■■■■■ 4.81
PRPH-202ENST00000451891 PABPN1Q86U42 306 aaKnown RBP eCLIP44.86■■■■■ 4.77
PRPH-202ENST00000451891 BICRAQ9NZM4 1560 aa44.74■■■■■ 4.75
PRPH-202ENST00000451891 SCRIBQ14160 1630 aa44.74■■■■■ 4.75
PRPH-202ENST00000451891 SHROOM4Q9ULL8 1493 aa44.16■■■■■ 4.66
PRPH-202ENST00000451891 DNAJC5BQ9UF47 199 aa44.12■■■■■ 4.65
PRPH-202ENST00000451891 EIF4G1Q04637 1599 aaKnown RBP43.56■■■■■ 4.56
PRPH-202ENST00000451891 CC2D2AQ9P2K1 1620 aa43.4■■■■■ 4.54
PRPH-202ENST00000451891 CECR2Q9BXF3 1484 aa43.11■■■■■ 4.49
PRPH-202ENST00000451891 SMARCA4P51532 1647 aa42.74■■■■■ 4.43
PRPH-202ENST00000451891 BAZ1AQ9NRL2 1556 aaPredicted RBP42.65■■■■■ 4.42
PRPH-202ENST00000451891 ATAD2BQ9ULI0 1458 aa42.5■■■■■ 4.39
PRPH-202ENST00000451891 MROH2BQ7Z745 1585 aa42.45■■■■■ 4.39
PRPH-202ENST00000451891 NCAPD3P42695 1498 aa42.44■■■■■ 4.38
PRPH-202ENST00000451891 SMARCA2P51531 1590 aa42.42■■■■■ 4.38
PRPH-202ENST00000451891 PEG3Q9GZU2 1588 aa42.27■■■■■ 4.36
PRPH-202ENST00000451891 HMGXB3Q12766 1538 aa42.25■■■■■ 4.35
PRPH-202ENST00000451891 BAZ1BQ9UIG0 1483 aaKnown RBP42.16■■■■■ 4.34
PRPH-202ENST00000451891 WIZO95785 1651 aa42.01■■■■■ 4.32
PRPH-202ENST00000451891 RSF1Q96T23 1441 aaPredicted RBP41.92■■■■■ 4.3
PRPH-202ENST00000451891 NESP48681 1621 aa41.55■■■■■ 4.24
PRPH-202ENST00000451891 TOP2AP11388 1531 aaKnown RBP41.51■■■■■ 4.24
PRPH-202ENST00000451891 LAMC3Q9Y6N6 1575 aa41.36■■■■■ 4.21
PRPH-202ENST00000451891 ERCC6Q03468 1493 aa41.35■■■■■ 4.21
PRPH-202ENST00000451891 CADPSQ9ULU8 1353 aa41.22■■■■■ 4.19
PRPH-202ENST00000451891 PDS5BQ9NTI5 1447 aa41.07■■■■■ 4.16
PRPH-202ENST00000451891 KIF21AQ7Z4S6 1674 aa41.04■■■■■ 4.16
PRPH-202ENST00000451891 CCDC88BA6NC98 1476 aa41.04■■■■■ 4.16
PRPH-202ENST00000451891 CFTRP13569 1480 aa40.96■■■■■ 4.15
PRPH-202ENST00000451891 THOC2Q8NI27 1593 aaKnown RBP40.91■■■■■ 4.14
PRPH-202ENST00000451891 CUX2O14529 1486 aa40.89■■■■■ 4.14
PRPH-202ENST00000451891 SUPT5HO00267 1087 aaKnown RBP40.86■■■■■ 4.13
PRPH-202ENST00000451891 FANCD2Q9BXW9 1451 aa40.78■■■■■ 4.12
PRPH-202ENST00000451891 CEP164Q9UPV0 1460 aa40.73■■■■■ 4.11
PRPH-202ENST00000451891 MRC2Q9UBG0 1479 aa40.69■■■■■ 4.1
PRPH-202ENST00000451891 PRDM2Q13029 1718 aa40.67■■■■■ 4.1
PRPH-202ENST00000451891 WDR62O43379 1518 aa40.55■■■■■ 4.08
PRPH-202ENST00000451891 URB2Q14146 1524 aaKnown RBP40.41■■■■■ 4.06
PRPH-202ENST00000451891 TOPBP1Q92547 1522 aa40.12■■■■■ 4.01
PRPH-202ENST00000451891 DNMBPQ6XZF7 1577 aa40.07■■■■■ 4.01
PRPH-202ENST00000451891 ABCC8Q09428 1581 aa40.05■■■■■ 4
PRPH-202ENST00000451891 IFT140Q96RY7 1462 aa39.86■■■■□ 3.97
PRPH-202ENST00000451891 CUX1P39880 1505 aa39.83■■■■□ 3.97
PRPH-202ENST00000451891 POLA1P09884 1462 aaPredicted RBP39.78■■■■□ 3.96
PRPH-202ENST00000451891 ZNF608Q9ULD9 1512 aaPredicted RBP39.75■■■■□ 3.95
PRPH-202ENST00000451891 DNAJC5Q9H3Z4 198 aa39.71■■■■□ 3.95
PRPH-202ENST00000451891 TARBP1Q13395 1621 aaKnown RBP39.7■■■■□ 3.95
PRPH-202ENST00000451891 FGD5Q6ZNL6 1462 aa39.69■■■■□ 3.94
PRPH-202ENST00000451891 RAD54L2Q9Y4B4 1467 aa39.65■■■■□ 3.94
PRPH-202ENST00000451891 SOGA1O94964 1423 aa39.6■■■■□ 3.93
PRPH-202ENST00000451891 EIF4G3O43432 1585 aaKnown RBP39.59■■■■□ 3.93
PRPH-202ENST00000451891 WRNQ14191 1432 aaPredicted RBP eCLIP39.52■■■■□ 3.92
PRPH-202ENST00000451891 AQRO60306 1485 aaKnown RBP eCLIP39.5■■■■□ 3.91
PRPH-202ENST00000451891 SYNJ1O43426 1573 aa39.48■■■■□ 3.91
PRPH-202ENST00000451891 TOP2BQ02880 1626 aa39.44■■■■□ 3.9
PRPH-202ENST00000451891 BIVM-ERCC5R4GMW8 1640 aa39.44■■■■□ 3.9
PRPH-202ENST00000451891 TDRD9Q8NDG6 1382 aaKnown RBP39.43■■■■□ 3.9
PRPH-202ENST00000451891 WDR97A6NE52 1622 aa39.37■■■■□ 3.89
PRPH-202ENST00000451891 ABCA10Q8WWZ4 1543 aa39.27■■■■□ 3.88
PRPH-202ENST00000451891 OSCARQ8IYS5 282 aa39.19■■■■□ 3.86
PRPH-202ENST00000451891 ABCA5Q8WWZ7 1642 aa39.15■■■■□ 3.86
PRPH-202ENST00000451891 GAPVD1Q14C86 1478 aa39.15■■■■□ 3.86
PRPH-202ENST00000451891 GRIN2BQ13224 1484 aa39.14■■■■□ 3.86
PRPH-202ENST00000451891 SNAPC4Q5SXM2 1469 aa39.14■■■■□ 3.86
PRPH-202ENST00000451891 PBRM1Q86U86 1689 aa39.11■■■■□ 3.85
PRPH-202ENST00000451891 CHD1O14646 1710 aa39.11■■■■□ 3.85
PRPH-202ENST00000451891 FBLN2P98095 1184 aa39.04■■■■□ 3.84
PRPH-202ENST00000451891 MAGI1Q96QZ7 1491 aaPredicted RBP39.03■■■■□ 3.84
PRPH-202ENST00000451891 SYNJ2O15056 1496 aa38.9■■■■□ 3.82
PRPH-202ENST00000451891 CHMP7Q8WUX9 453 aaPredicted RBP38.89■■■■□ 3.82
PRPH-202ENST00000451891 ADAMTS12P58397 1594 aa38.79■■■■□ 3.8
PRPH-202ENST00000451891 ERICH3Q5RHP9 1530 aa38.79■■■■□ 3.8
PRPH-202ENST00000451891 FHAD1B1AJZ9 1412 aa38.68■■■■□ 3.78
PRPH-202ENST00000451891 KIF27Q86VH2 1401 aa38.68■■■■□ 3.78
PRPH-202ENST00000451891 GRIN2AQ12879 1464 aa38.66■■■■□ 3.78
PRPH-202ENST00000451891 CLASP1Q7Z460 1538 aa38.65■■■■□ 3.78
PRPH-202ENST00000451891 RIMBP3CA6NJZ7 1639 aa38.64■■■■□ 3.78
PRPH-202ENST00000451891 RIMBP3BA6NNM3 1639 aa38.64■■■■□ 3.78
PRPH-202ENST00000451891 RIMBP3Q9UFD9 1639 aa38.64■■■■□ 3.78
PRPH-202ENST00000451891 ARHGEF11O15085 1522 aa38.6■■■■□ 3.77
PRPH-202ENST00000451891 TRIM41Q8WV44 630 aa38.54■■■■□ 3.76
PRPH-202ENST00000451891 IGF1RP08069 1367 aa38.54■■■■□ 3.76
PRPH-202ENST00000451891 CEP170Q5SW79 1584 aa38.49■■■■□ 3.75
PRPH-202ENST00000451891 NUP160Q12769 1436 aa38.46■■■■□ 3.75
PRPH-202ENST00000451891 CUL7Q14999 1698 aa38.44■■■■□ 3.74
PRPH-202ENST00000451891 RUSC2Q8N2Y8 1516 aa38.4■■■■□ 3.74
PRPH-202ENST00000451891 ARAP1Q96P48 1450 aa38.31■■■■□ 3.72
PRPH-202ENST00000451891 CARMIL1Q5VZK9 1371 aa38.31■■■■□ 3.72
PRPH-202ENST00000451891 CYB5RLQ6IPT4 315 aa38.25■■■■□ 3.71
PRPH-202ENST00000451891 SHROOM2Q13796 1616 aa38.2■■■■□ 3.7
PRPH-202ENST00000451891 ERCC6L2Q5T890 1561 aa38.18■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms