RNA–Protein interactions for RNA: ENST00000451781.1

FAM239B-203, Transcript of family with sequence similarity 239 member B, humanhuman

TSL 3

Gene FAM239B, Length 490 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239B-203ENST00000451781 NISCHQ9Y2I1 1504 aa51.23■■■■■ 5.79
FAM239B-203ENST00000451781 CCDC180Q9P1Z9 1646 aa45.8■■■■■ 4.92
FAM239B-203ENST00000451781 ABCC9O60706 1549 aa45.12■■■■■ 4.81
FAM239B-203ENST00000451781 RB1CC1Q8TDY2 1594 aa43.29■■■■■ 4.52
FAM239B-203ENST00000451781 NACADO15069 1562 aa43.12■■■■■ 4.49
FAM239B-203ENST00000451781 DCAF8L2P0C7V8 631 aa43■■■■■ 4.47
FAM239B-203ENST00000451781 MYO15BQ96JP2 1530 aa42.69■■■■■ 4.42
FAM239B-203ENST00000451781 ZCCHC6Q5VYS8 1495 aaKnown RBP42.61■■■■■ 4.41
FAM239B-203ENST00000451781 DCAF1Q9Y4B6 1507 aa42.37■■■■■ 4.37
FAM239B-203ENST00000451781 UNC13AQ9UPW8 1703 aa42.27■■■■■ 4.36
FAM239B-203ENST00000451781 PABPN1Q86U42 306 aaKnown RBP eCLIP42.05■■■■■ 4.32
FAM239B-203ENST00000451781 BICRAQ9NZM4 1560 aa41.89■■■■■ 4.3
FAM239B-203ENST00000451781 SCRIBQ14160 1630 aa41.76■■■■■ 4.28
FAM239B-203ENST00000451781 DNAJC5BQ9UF47 199 aa41.6■■■■■ 4.25
FAM239B-203ENST00000451781 SHROOM4Q9ULL8 1493 aa41.51■■■■■ 4.24
FAM239B-203ENST00000451781 EIF4G1Q04637 1599 aaKnown RBP40.87■■■■■ 4.13
FAM239B-203ENST00000451781 CC2D2AQ9P2K1 1620 aa40.8■■■■■ 4.12
FAM239B-203ENST00000451781 CECR2Q9BXF3 1484 aa40.59■■■■■ 4.09
FAM239B-203ENST00000451781 SMARCA4P51532 1647 aa39.87■■■■□ 3.97
FAM239B-203ENST00000451781 BAZ1AQ9NRL2 1556 aaPredicted RBP39.79■■■■□ 3.96
FAM239B-203ENST00000451781 NCAPD3P42695 1498 aa39.72■■■■□ 3.95
FAM239B-203ENST00000451781 SMARCA2P51531 1590 aa39.71■■■■□ 3.95
FAM239B-203ENST00000451781 ATAD2BQ9ULI0 1458 aa39.7■■■■□ 3.95
FAM239B-203ENST00000451781 HMGXB3Q12766 1538 aa39.56■■■■□ 3.92
FAM239B-203ENST00000451781 MROH2BQ7Z745 1585 aa39.46■■■■□ 3.91
FAM239B-203ENST00000451781 PEG3Q9GZU2 1588 aa39.45■■■■□ 3.91
FAM239B-203ENST00000451781 BAZ1BQ9UIG0 1483 aaKnown RBP39.43■■■■□ 3.9
FAM239B-203ENST00000451781 WIZO95785 1651 aa39.06■■■■□ 3.84
FAM239B-203ENST00000451781 ERCC6Q03468 1493 aa39■■■■□ 3.83
FAM239B-203ENST00000451781 NESP48681 1621 aa38.9■■■■□ 3.82
FAM239B-203ENST00000451781 RSF1Q96T23 1441 aaPredicted RBP38.86■■■■□ 3.81
FAM239B-203ENST00000451781 LAMC3Q9Y6N6 1575 aa38.82■■■■□ 3.8
FAM239B-203ENST00000451781 CUX2O14529 1486 aa38.67■■■■□ 3.78
FAM239B-203ENST00000451781 TOP2AP11388 1531 aaKnown RBP38.64■■■■□ 3.78
FAM239B-203ENST00000451781 PDS5BQ9NTI5 1447 aa38.56■■■■□ 3.76
FAM239B-203ENST00000451781 CADPSQ9ULU8 1353 aa38.56■■■■□ 3.76
FAM239B-203ENST00000451781 KIF21AQ7Z4S6 1674 aa38.5■■■■□ 3.75
FAM239B-203ENST00000451781 THOC2Q8NI27 1593 aaKnown RBP38.44■■■■□ 3.74
FAM239B-203ENST00000451781 CFTRP13569 1480 aa38.25■■■■□ 3.71
FAM239B-203ENST00000451781 MRC2Q9UBG0 1479 aa38.19■■■■□ 3.7
FAM239B-203ENST00000451781 CEP164Q9UPV0 1460 aa38.19■■■■□ 3.7
FAM239B-203ENST00000451781 FANCD2Q9BXW9 1451 aa38.16■■■■□ 3.7
FAM239B-203ENST00000451781 CCDC88BA6NC98 1476 aa38.13■■■■□ 3.69
FAM239B-203ENST00000451781 WDR62O43379 1518 aa38.06■■■■□ 3.68
FAM239B-203ENST00000451781 PRDM2Q13029 1718 aa38.05■■■■□ 3.68
FAM239B-203ENST00000451781 DNAJC5Q9H3Z4 198 aa37.83■■■■□ 3.65
FAM239B-203ENST00000451781 URB2Q14146 1524 aaKnown RBP37.77■■■■□ 3.64
FAM239B-203ENST00000451781 SUPT5HO00267 1087 aaKnown RBP37.65■■■■□ 3.62
FAM239B-203ENST00000451781 ABCC8Q09428 1581 aa37.51■■■■□ 3.6
FAM239B-203ENST00000451781 TOPBP1Q92547 1522 aa37.5■■■■□ 3.59
FAM239B-203ENST00000451781 DNMBPQ6XZF7 1577 aa37.46■■■■□ 3.59
FAM239B-203ENST00000451781 IFT140Q96RY7 1462 aa37.38■■■■□ 3.57
FAM239B-203ENST00000451781 ZNF608Q9ULD9 1512 aaPredicted RBP37.19■■■■□ 3.54
FAM239B-203ENST00000451781 POLA1P09884 1462 aaPredicted RBP37.15■■■■□ 3.54
FAM239B-203ENST00000451781 TARBP1Q13395 1621 aaKnown RBP37.11■■■■□ 3.53
FAM239B-203ENST00000451781 EIF4G3O43432 1585 aaKnown RBP37.11■■■■□ 3.53
FAM239B-203ENST00000451781 CUX1P39880 1505 aa37.06■■■■□ 3.52
FAM239B-203ENST00000451781 FGD5Q6ZNL6 1462 aa37.02■■■■□ 3.52
FAM239B-203ENST00000451781 SOGA1O94964 1423 aa36.99■■■■□ 3.51
FAM239B-203ENST00000451781 RAD54L2Q9Y4B4 1467 aa36.97■■■■□ 3.51
FAM239B-203ENST00000451781 OSCARQ8IYS5 282 aa36.96■■■■□ 3.51
FAM239B-203ENST00000451781 AQRO60306 1485 aaKnown RBP eCLIP36.94■■■■□ 3.5
FAM239B-203ENST00000451781 WDR97A6NE52 1622 aa36.86■■■■□ 3.49
FAM239B-203ENST00000451781 TDRD9Q8NDG6 1382 aaKnown RBP36.81■■■■□ 3.48
FAM239B-203ENST00000451781 CHD1O14646 1710 aa36.72■■■■□ 3.47
FAM239B-203ENST00000451781 WRNQ14191 1432 aaPredicted RBP eCLIP36.71■■■■□ 3.47
FAM239B-203ENST00000451781 BIVM-ERCC5R4GMW8 1640 aa36.69■■■■□ 3.46
FAM239B-203ENST00000451781 TOP2BQ02880 1626 aa36.68■■■■□ 3.46
FAM239B-203ENST00000451781 SNAPC4Q5SXM2 1469 aa36.64■■■■□ 3.46
FAM239B-203ENST00000451781 FBLN2P98095 1184 aa36.64■■■■□ 3.46
FAM239B-203ENST00000451781 GRIN2BQ13224 1484 aa36.63■■■■□ 3.45
FAM239B-203ENST00000451781 SYNJ1O43426 1573 aa36.63■■■■□ 3.45
FAM239B-203ENST00000451781 ABCA10Q8WWZ4 1543 aa36.63■■■■□ 3.45
FAM239B-203ENST00000451781 MAGI1Q96QZ7 1491 aaPredicted RBP36.59■■■■□ 3.45
FAM239B-203ENST00000451781 PBRM1Q86U86 1689 aa36.58■■■■□ 3.45
FAM239B-203ENST00000451781 GAPVD1Q14C86 1478 aa36.57■■■■□ 3.45
FAM239B-203ENST00000451781 ABCA5Q8WWZ7 1642 aa36.55■■■■□ 3.44
FAM239B-203ENST00000451781 TRIM41Q8WV44 630 aa36.52■■■■□ 3.44
FAM239B-203ENST00000451781 CHMP7Q8WUX9 453 aaPredicted RBP36.46■■■■□ 3.43
FAM239B-203ENST00000451781 RIMBP3CA6NJZ7 1639 aa36.45■■■■□ 3.43
FAM239B-203ENST00000451781 RIMBP3BA6NNM3 1639 aa36.45■■■■□ 3.43
FAM239B-203ENST00000451781 RIMBP3Q9UFD9 1639 aa36.45■■■■□ 3.43
FAM239B-203ENST00000451781 SYNJ2O15056 1496 aa36.43■■■■□ 3.42
FAM239B-203ENST00000451781 ARHGEF11O15085 1522 aa36.39■■■■□ 3.42
FAM239B-203ENST00000451781 CLASP1Q7Z460 1538 aa36.26■■■■□ 3.4
FAM239B-203ENST00000451781 ADAMTS12P58397 1594 aa36.24■■■■□ 3.39
FAM239B-203ENST00000451781 ERICH3Q5RHP9 1530 aa36.21■■■■□ 3.39
FAM239B-203ENST00000451781 GRIN2AQ12879 1464 aa36.16■■■■□ 3.38
FAM239B-203ENST00000451781 FHAD1B1AJZ9 1412 aa36.14■■■■□ 3.38
FAM239B-203ENST00000451781 ARAP1Q96P48 1450 aa36.05■■■■□ 3.36
FAM239B-203ENST00000451781 CYB5RLQ6IPT4 315 aa36.05■■■■□ 3.36
FAM239B-203ENST00000451781 KIF27Q86VH2 1401 aa35.99■■■■□ 3.35
FAM239B-203ENST00000451781 CEP170Q5SW79 1584 aa35.98■■■■□ 3.35
FAM239B-203ENST00000451781 NUP160Q12769 1436 aa35.97■■■■□ 3.35
FAM239B-203ENST00000451781 CUL7Q14999 1698 aa35.87■■■■□ 3.33
FAM239B-203ENST00000451781 IGF1RP08069 1367 aa35.8■■■■□ 3.32
FAM239B-203ENST00000451781 SHROOM2Q13796 1616 aa35.77■■■■□ 3.32
FAM239B-203ENST00000451781 RUSC2Q8N2Y8 1516 aa35.72■■■■□ 3.31
FAM239B-203ENST00000451781 ERCC6L2Q5T890 1561 aa35.7■■■■□ 3.31
FAM239B-203ENST00000451781 CARMIL1Q5VZK9 1371 aa35.63■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms