RNA–Protein interactions for RNA: ENST00000451734.1

NIFK-204, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 3

Gene NIFK, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-204ENST00000451734 NISCHQ9Y2I1 1504 aa42.59■■■■■ 4.41
NIFK-204ENST00000451734 CCDC180Q9P1Z9 1646 aa37.85■■■■□ 3.65
NIFK-204ENST00000451734 ABCC9O60706 1549 aa37.54■■■■□ 3.6
NIFK-204ENST00000451734 RB1CC1Q8TDY2 1594 aa35.85■■■■□ 3.33
NIFK-204ENST00000451734 DCAF8L2P0C7V8 631 aa35.84■■■■□ 3.33
NIFK-204ENST00000451734 NACADO15069 1562 aa35.76■■■■□ 3.31
NIFK-204ENST00000451734 MYO15BQ96JP2 1530 aa35.45■■■■□ 3.27
NIFK-204ENST00000451734 ZCCHC6Q5VYS8 1495 aaKnown RBP35.4■■■■□ 3.26
NIFK-204ENST00000451734 DCAF1Q9Y4B6 1507 aa35.18■■■■□ 3.22
NIFK-204ENST00000451734 PABPN1Q86U42 306 aaKnown RBP eCLIP35.12■■■■□ 3.21
NIFK-204ENST00000451734 UNC13AQ9UPW8 1703 aa34.92■■■■□ 3.18
NIFK-204ENST00000451734 DNAJC5BQ9UF47 199 aa34.87■■■■□ 3.17
NIFK-204ENST00000451734 BICRAQ9NZM4 1560 aa34.83■■■■□ 3.17
NIFK-204ENST00000451734 SCRIBQ14160 1630 aa34.62■■■■□ 3.13
NIFK-204ENST00000451734 SHROOM4Q9ULL8 1493 aa34.38■■■■□ 3.09
NIFK-204ENST00000451734 EIF4G1Q04637 1599 aaKnown RBP33.93■■■■□ 3.02
NIFK-204ENST00000451734 CC2D2AQ9P2K1 1620 aa33.86■■■■□ 3.01
NIFK-204ENST00000451734 CECR2Q9BXF3 1484 aa33.76■■■□□ 2.99
NIFK-204ENST00000451734 NCAPD3P42695 1498 aa33.08■■■□□ 2.89
NIFK-204ENST00000451734 SMARCA4P51532 1647 aa33.06■■■□□ 2.88
NIFK-204ENST00000451734 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
NIFK-204ENST00000451734 BAZ1AQ9NRL2 1556 aaPredicted RBP32.99■■■□□ 2.87
NIFK-204ENST00000451734 SMARCA2P51531 1590 aa32.92■■■□□ 2.86
NIFK-204ENST00000451734 MROH2BQ7Z745 1585 aa32.84■■■□□ 2.85
NIFK-204ENST00000451734 HMGXB3Q12766 1538 aa32.8■■■□□ 2.84
NIFK-204ENST00000451734 PEG3Q9GZU2 1588 aa32.74■■■□□ 2.83
NIFK-204ENST00000451734 BAZ1BQ9UIG0 1483 aaKnown RBP32.73■■■□□ 2.83
NIFK-204ENST00000451734 WIZO95785 1651 aa32.4■■■□□ 2.78
NIFK-204ENST00000451734 NESP48681 1621 aa32.4■■■□□ 2.78
NIFK-204ENST00000451734 RSF1Q96T23 1441 aaPredicted RBP32.39■■■□□ 2.78
NIFK-204ENST00000451734 ERCC6Q03468 1493 aa32.35■■■□□ 2.77
NIFK-204ENST00000451734 LAMC3Q9Y6N6 1575 aa32.15■■■□□ 2.74
NIFK-204ENST00000451734 CADPSQ9ULU8 1353 aa32.12■■■□□ 2.73
NIFK-204ENST00000451734 CUX2O14529 1486 aa32.1■■■□□ 2.73
NIFK-204ENST00000451734 TOP2AP11388 1531 aaKnown RBP32.05■■■□□ 2.72
NIFK-204ENST00000451734 PDS5BQ9NTI5 1447 aa32.03■■■□□ 2.72
NIFK-204ENST00000451734 THOC2Q8NI27 1593 aaKnown RBP31.86■■■□□ 2.69
NIFK-204ENST00000451734 KIF21AQ7Z4S6 1674 aa31.84■■■□□ 2.69
NIFK-204ENST00000451734 CFTRP13569 1480 aa31.84■■■□□ 2.69
NIFK-204ENST00000451734 CCDC88BA6NC98 1476 aa31.75■■■□□ 2.67
NIFK-204ENST00000451734 FANCD2Q9BXW9 1451 aa31.72■■■□□ 2.67
NIFK-204ENST00000451734 MRC2Q9UBG0 1479 aa31.72■■■□□ 2.67
NIFK-204ENST00000451734 CEP164Q9UPV0 1460 aa31.67■■■□□ 2.66
NIFK-204ENST00000451734 DNAJC5Q9H3Z4 198 aa31.6■■■□□ 2.65
NIFK-204ENST00000451734 WDR62O43379 1518 aa31.59■■■□□ 2.65
NIFK-204ENST00000451734 URB2Q14146 1524 aaKnown RBP31.43■■■□□ 2.62
NIFK-204ENST00000451734 SUPT5HO00267 1087 aaKnown RBP31.39■■■□□ 2.62
NIFK-204ENST00000451734 PRDM2Q13029 1718 aa31.3■■■□□ 2.6
NIFK-204ENST00000451734 TOPBP1Q92547 1522 aa31.16■■■□□ 2.58
NIFK-204ENST00000451734 ABCC8Q09428 1581 aa31.1■■■□□ 2.57
NIFK-204ENST00000451734 IFT140Q96RY7 1462 aa31.05■■■□□ 2.56
NIFK-204ENST00000451734 DNMBPQ6XZF7 1577 aa31.05■■■□□ 2.56
NIFK-204ENST00000451734 ZNF608Q9ULD9 1512 aaPredicted RBP30.98■■■□□ 2.55
NIFK-204ENST00000451734 POLA1P09884 1462 aaPredicted RBP30.89■■■□□ 2.53
NIFK-204ENST00000451734 CUX1P39880 1505 aa30.82■■■□□ 2.52
NIFK-204ENST00000451734 OSCARQ8IYS5 282 aa30.81■■■□□ 2.52
NIFK-204ENST00000451734 RAD54L2Q9Y4B4 1467 aa30.8■■■□□ 2.52
NIFK-204ENST00000451734 TARBP1Q13395 1621 aaKnown RBP30.8■■■□□ 2.52
NIFK-204ENST00000451734 SOGA1O94964 1423 aa30.79■■■□□ 2.52
NIFK-204ENST00000451734 AQRO60306 1485 aaKnown RBP eCLIP30.78■■■□□ 2.527e-7■■■■■ 31
NIFK-204ENST00000451734 FGD5Q6ZNL6 1462 aa30.76■■■□□ 2.52
NIFK-204ENST00000451734 EIF4G3O43432 1585 aaKnown RBP30.72■■■□□ 2.51
NIFK-204ENST00000451734 TDRD9Q8NDG6 1382 aaKnown RBP30.69■■■□□ 2.5
NIFK-204ENST00000451734 WRNQ14191 1432 aaPredicted RBP eCLIP30.52■■■□□ 2.48
NIFK-204ENST00000451734 FBLN2P98095 1184 aa30.5■■■□□ 2.47
NIFK-204ENST00000451734 WDR97A6NE52 1622 aa30.47■■■□□ 2.47
NIFK-204ENST00000451734 ABCA10Q8WWZ4 1543 aa30.44■■■□□ 2.46
NIFK-204ENST00000451734 SNAPC4Q5SXM2 1469 aa30.44■■■□□ 2.46
NIFK-204ENST00000451734 TRIM41Q8WV44 630 aa30.43■■■□□ 2.46
NIFK-204ENST00000451734 GRIN2BQ13224 1484 aa30.43■■■□□ 2.46
NIFK-204ENST00000451734 SYNJ1O43426 1573 aa30.41■■■□□ 2.46
NIFK-204ENST00000451734 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
NIFK-204ENST00000451734 GAPVD1Q14C86 1478 aa30.39■■■□□ 2.46
NIFK-204ENST00000451734 BIVM-ERCC5R4GMW8 1640 aa30.36■■■□□ 2.45
NIFK-204ENST00000451734 CHMP7Q8WUX9 453 aaPredicted RBP30.35■■■□□ 2.45
NIFK-204ENST00000451734 MAGI1Q96QZ7 1491 aaPredicted RBP30.35■■■□□ 2.45
NIFK-204ENST00000451734 CHD1O14646 1710 aa30.34■■■□□ 2.45
NIFK-204ENST00000451734 ABCA5Q8WWZ7 1642 aa30.28■■■□□ 2.44
NIFK-204ENST00000451734 SYNJ2O15056 1496 aa30.26■■■□□ 2.44
NIFK-204ENST00000451734 ARHGEF11O15085 1522 aa30.23■■■□□ 2.43
NIFK-204ENST00000451734 RIMBP3CA6NJZ7 1639 aa30.22■■■□□ 2.43
NIFK-204ENST00000451734 RIMBP3BA6NNM3 1639 aa30.22■■■□□ 2.43
NIFK-204ENST00000451734 RIMBP3Q9UFD9 1639 aa30.22■■■□□ 2.43
NIFK-204ENST00000451734 PBRM1Q86U86 1689 aa30.19■■■□□ 2.42
NIFK-204ENST00000451734 CLASP1Q7Z460 1538 aa30.11■■■□□ 2.41
NIFK-204ENST00000451734 CYB5RLQ6IPT4 315 aa30.07■■■□□ 2.4
NIFK-204ENST00000451734 FHAD1B1AJZ9 1412 aa30.05■■■□□ 2.4
NIFK-204ENST00000451734 ADAMTS12P58397 1594 aa30.03■■■□□ 2.4
NIFK-204ENST00000451734 ERICH3Q5RHP9 1530 aa30.03■■■□□ 2.4
NIFK-204ENST00000451734 GRIN2AQ12879 1464 aa30.03■■■□□ 2.4
NIFK-204ENST00000451734 ARAP1Q96P48 1450 aa29.99■■■□□ 2.39
NIFK-204ENST00000451734 NUP160Q12769 1436 aa29.94■■■□□ 2.38
NIFK-204ENST00000451734 KIF27Q86VH2 1401 aa29.9■■■□□ 2.38
NIFK-204ENST00000451734 IGF1RP08069 1367 aa29.89■■■□□ 2.37
NIFK-204ENST00000451734 CEP170Q5SW79 1584 aa29.87■■■□□ 2.37
NIFK-204ENST00000451734 ERCC6L2Q5T890 1561 aa29.71■■■□□ 2.35
NIFK-204ENST00000451734 JPH4Q96JJ6 628 aa29.69■■■□□ 2.34
NIFK-204ENST00000451734 CARMIL1Q5VZK9 1371 aa29.68■■■□□ 2.34
NIFK-204ENST00000451734 SHROOM2Q13796 1616 aa29.65■■■□□ 2.34
NIFK-204ENST00000451734 CUL7Q14999 1698 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms