RNA–Protein interactions for RNA: ENST00000451724.6

LRP1-203, Transcript of LDL receptor related protein 1, humanhuman

TSL 5

Gene LRP1, Length 1,284 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-203ENST00000451724 NISCHQ9Y2I1 1504 aa43.58■■■■■ 4.57
LRP1-203ENST00000451724 CCDC180Q9P1Z9 1646 aa39.16■■■■□ 3.86
LRP1-203ENST00000451724 ABCC9O60706 1549 aa38.87■■■■□ 3.81
LRP1-203ENST00000451724 RB1CC1Q8TDY2 1594 aa37.14■■■■□ 3.54
LRP1-203ENST00000451724 NACADO15069 1562 aa36.92■■■■□ 3.5
LRP1-203ENST00000451724 DCAF8L2P0C7V8 631 aa36.54■■■■□ 3.44
LRP1-203ENST00000451724 MYO15BQ96JP2 1530 aa36.49■■■■□ 3.43
LRP1-203ENST00000451724 UNC13AQ9UPW8 1703 aa36.33■■■■□ 3.41
LRP1-203ENST00000451724 DNAJC5BQ9UF47 199 aa36.23■■■■□ 3.39
LRP1-203ENST00000451724 ZCCHC6Q5VYS8 1495 aaKnown RBP36.18■■■■□ 3.38
LRP1-203ENST00000451724 PABPN1Q86U42 306 aaKnown RBP eCLIP36.12■■■■□ 3.37
LRP1-203ENST00000451724 DCAF1Q9Y4B6 1507 aa36.06■■■■□ 3.36
LRP1-203ENST00000451724 BICRAQ9NZM4 1560 aa36.03■■■■□ 3.36
LRP1-203ENST00000451724 SHROOM4Q9ULL8 1493 aa35.65■■■■□ 3.3
LRP1-203ENST00000451724 SCRIBQ14160 1630 aa35.61■■■■□ 3.29
LRP1-203ENST00000451724 CC2D2AQ9P2K1 1620 aa35.17■■■■□ 3.22
LRP1-203ENST00000451724 EIF4G1Q04637 1599 aaKnown RBP35.15■■■■□ 3.22
LRP1-203ENST00000451724 CECR2Q9BXF3 1484 aa35.02■■■■□ 3.2
LRP1-203ENST00000451724 NCAPD3P42695 1498 aa34.03■■■■□ 3.04
LRP1-203ENST00000451724 SMARCA4P51532 1647 aa34.01■■■■□ 3.03
LRP1-203ENST00000451724 ATAD2BQ9ULI0 1458 aa33.95■■■■□ 3.02
LRP1-203ENST00000451724 SMARCA2P51531 1590 aa33.91■■■■□ 3.02
LRP1-203ENST00000451724 HMGXB3Q12766 1538 aa33.87■■■■□ 3.01
LRP1-203ENST00000451724 BAZ1AQ9NRL2 1556 aaPredicted RBP33.85■■■■□ 3.01
LRP1-203ENST00000451724 PEG3Q9GZU2 1588 aa33.69■■■□□ 2.98
LRP1-203ENST00000451724 BAZ1BQ9UIG0 1483 aaKnown RBP33.65■■■□□ 2.98
LRP1-203ENST00000451724 ERCC6Q03468 1493 aa33.57■■■□□ 2.97
LRP1-203ENST00000451724 MROH2BQ7Z745 1585 aa33.56■■■□□ 2.96
LRP1-203ENST00000451724 CUX2O14529 1486 aa33.5■■■□□ 2.95
LRP1-203ENST00000451724 NESP48681 1621 aa33.42■■■□□ 2.94
LRP1-203ENST00000451724 LAMC3Q9Y6N6 1575 aa33.3■■■□□ 2.92
LRP1-203ENST00000451724 DNAJC5Q9H3Z4 198 aa33.2■■■□□ 2.91
LRP1-203ENST00000451724 WIZO95785 1651 aa33.19■■■□□ 2.9
LRP1-203ENST00000451724 THOC2Q8NI27 1593 aaKnown RBP33.17■■■□□ 2.9
LRP1-203ENST00000451724 KIF21AQ7Z4S6 1674 aa33.09■■■□□ 2.89
LRP1-203ENST00000451724 PDS5BQ9NTI5 1447 aa33.04■■■□□ 2.88
LRP1-203ENST00000451724 CADPSQ9ULU8 1353 aa32.97■■■□□ 2.87
LRP1-203ENST00000451724 RSF1Q96T23 1441 aaPredicted RBP32.89■■■□□ 2.86
LRP1-203ENST00000451724 TOP2AP11388 1531 aaKnown RBP32.82■■■□□ 2.84
LRP1-203ENST00000451724 MRC2Q9UBG0 1479 aa32.79■■■□□ 2.84
LRP1-203ENST00000451724 WDR62O43379 1518 aa32.73■■■□□ 2.83
LRP1-203ENST00000451724 CEP164Q9UPV0 1460 aa32.69■■■□□ 2.82
LRP1-203ENST00000451724 CFTRP13569 1480 aa32.67■■■□□ 2.82
LRP1-203ENST00000451724 FANCD2Q9BXW9 1451 aa32.64■■■□□ 2.82
LRP1-203ENST00000451724 PRDM2Q13029 1718 aa32.48■■■□□ 2.79
LRP1-203ENST00000451724 CCDC88BA6NC98 1476 aa32.36■■■□□ 2.77
LRP1-203ENST00000451724 URB2Q14146 1524 aaKnown RBP32.36■■■□□ 2.77
LRP1-203ENST00000451724 TOPBP1Q92547 1522 aa32.05■■■□□ 2.72
LRP1-203ENST00000451724 IFT140Q96RY7 1462 aa32.01■■■□□ 2.71
LRP1-203ENST00000451724 ABCC8Q09428 1581 aa32■■■□□ 2.71
LRP1-203ENST00000451724 DNMBPQ6XZF7 1577 aa31.98■■■□□ 2.71
LRP1-203ENST00000451724 ZNF608Q9ULD9 1512 aaPredicted RBP31.91■■■□□ 2.7
LRP1-203ENST00000451724 OSCARQ8IYS5 282 aa31.87■■■□□ 2.69
LRP1-203ENST00000451724 EIF4G3O43432 1585 aaKnown RBP31.84■■■□□ 2.69
LRP1-203ENST00000451724 TRIM41Q8WV44 630 aa31.78■■■□□ 2.68
LRP1-203ENST00000451724 TARBP1Q13395 1621 aaKnown RBP31.78■■■□□ 2.68
LRP1-203ENST00000451724 POLA1P09884 1462 aaPredicted RBP31.72■■■□□ 2.67
LRP1-203ENST00000451724 AQRO60306 1485 aaKnown RBP eCLIP31.61■■■□□ 2.652e-11■■■■■ 39.7
LRP1-203ENST00000451724 CHD1O14646 1710 aa31.57■■■□□ 2.64
LRP1-203ENST00000451724 RIMBP3CA6NJZ7 1639 aa31.57■■■□□ 2.64
LRP1-203ENST00000451724 RIMBP3BA6NNM3 1639 aa31.57■■■□□ 2.64
LRP1-203ENST00000451724 RIMBP3Q9UFD9 1639 aa31.57■■■□□ 2.64
LRP1-203ENST00000451724 RAD54L2Q9Y4B4 1467 aa31.56■■■□□ 2.64
LRP1-203ENST00000451724 FGD5Q6ZNL6 1462 aa31.55■■■□□ 2.64
LRP1-203ENST00000451724 SUPT5HO00267 1087 aaKnown RBP31.55■■■□□ 2.64
LRP1-203ENST00000451724 CUX1P39880 1505 aa31.54■■■□□ 2.64
LRP1-203ENST00000451724 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
LRP1-203ENST00000451724 SOGA1O94964 1423 aa31.53■■■□□ 2.64
LRP1-203ENST00000451724 ARHGEF11O15085 1522 aa31.47■■■□□ 2.63
LRP1-203ENST00000451724 TDRD9Q8NDG6 1382 aaKnown RBP31.43■■■□□ 2.62
LRP1-203ENST00000451724 SNAPC4Q5SXM2 1469 aa31.36■■■□□ 2.61
LRP1-203ENST00000451724 FBLN2P98095 1184 aa31.32■■■□□ 2.6
LRP1-203ENST00000451724 MAGI1Q96QZ7 1491 aaPredicted RBP31.31■■■□□ 2.6
LRP1-203ENST00000451724 GRIN2BQ13224 1484 aa31.29■■■□□ 2.6
LRP1-203ENST00000451724 PBRM1Q86U86 1689 aa31.25■■■□□ 2.59
LRP1-203ENST00000451724 ABCA10Q8WWZ4 1543 aa31.21■■■□□ 2.59
LRP1-203ENST00000451724 ABCA5Q8WWZ7 1642 aa31.2■■■□□ 2.59
LRP1-203ENST00000451724 CLASP1Q7Z460 1538 aa31.2■■■□□ 2.59
LRP1-203ENST00000451724 SYNJ1O43426 1573 aa31.19■■■□□ 2.58
LRP1-203ENST00000451724 SYNJ2O15056 1496 aa31.19■■■□□ 2.58
LRP1-203ENST00000451724 GAPVD1Q14C86 1478 aa31.19■■■□□ 2.58
LRP1-203ENST00000451724 ARAP1Q96P48 1450 aa31.16■■■□□ 2.58
LRP1-203ENST00000451724 BIVM-ERCC5R4GMW8 1640 aa31.14■■■□□ 2.58
LRP1-203ENST00000451724 CHMP7Q8WUX9 453 aaPredicted RBP31.14■■■□□ 2.58
LRP1-203ENST00000451724 TOP2BQ02880 1626 aa31.1■■■□□ 2.57
LRP1-203ENST00000451724 CYB5RLQ6IPT4 315 aa31.1■■■□□ 2.57
LRP1-203ENST00000451724 WRNQ14191 1432 aaPredicted RBP eCLIP31.07■■■□□ 2.57
LRP1-203ENST00000451724 ADAMTS12P58397 1594 aa30.96■■■□□ 2.55
LRP1-203ENST00000451724 GRIN2AQ12879 1464 aa30.9■■■□□ 2.54
LRP1-203ENST00000451724 ERICH3Q5RHP9 1530 aa30.83■■■□□ 2.53
LRP1-203ENST00000451724 FHAD1B1AJZ9 1412 aa30.81■■■□□ 2.52
LRP1-203ENST00000451724 CEP170Q5SW79 1584 aa30.8■■■□□ 2.52
LRP1-203ENST00000451724 NUP160Q12769 1436 aa30.79■■■□□ 2.52
LRP1-203ENST00000451724 TRHP20396 242 aaPredicted RBP30.71■■■□□ 2.51
LRP1-203ENST00000451724 SHROOM2Q13796 1616 aa30.69■■■□□ 2.5
LRP1-203ENST00000451724 ERCC6L2Q5T890 1561 aa30.67■■■□□ 2.5
LRP1-203ENST00000451724 RUSC2Q8N2Y8 1516 aa30.53■■■□□ 2.48
LRP1-203ENST00000451724 CUL7Q14999 1698 aa30.46■■■□□ 2.47
LRP1-203ENST00000451724 KIF27Q86VH2 1401 aa30.46■■■□□ 2.47
LRP1-203ENST00000451724 PRG4Q92954 1404 aaPredicted RBP30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms