RNA–Protein interactions for RNA: ENST00000451677.1

RPP38-206, Transcript of ribonuclease P/MRP subunit p38, humanhuman

TSL 3

Gene RPP38, Length 323 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-206ENST00000451677 NISCHQ9Y2I1 1504 aa52.14■■■■■ 5.94
RPP38-206ENST00000451677 CCDC180Q9P1Z9 1646 aa46.65■■■■■ 5.06
RPP38-206ENST00000451677 ABCC9O60706 1549 aa46.26■■■■■ 5
RPP38-206ENST00000451677 RB1CC1Q8TDY2 1594 aa44.23■■■■■ 4.67
RPP38-206ENST00000451677 NACADO15069 1562 aa44.05■■■■■ 4.64
RPP38-206ENST00000451677 DCAF8L2P0C7V8 631 aa43.72■■■■■ 4.59
RPP38-206ENST00000451677 MYO15BQ96JP2 1530 aa43.63■■■■■ 4.58
RPP38-206ENST00000451677 ZCCHC6Q5VYS8 1495 aaKnown RBP43.29■■■■■ 4.52
RPP38-206ENST00000451677 DNAJC5BQ9UF47 199 aa43.17■■■■■ 4.5
RPP38-206ENST00000451677 UNC13AQ9UPW8 1703 aa43.17■■■■■ 4.5
RPP38-206ENST00000451677 DCAF1Q9Y4B6 1507 aa43.16■■■■■ 4.5
RPP38-206ENST00000451677 PABPN1Q86U42 306 aaKnown RBP eCLIP43.12■■■■■ 4.49
RPP38-206ENST00000451677 BICRAQ9NZM4 1560 aa42.95■■■■■ 4.47
RPP38-206ENST00000451677 SHROOM4Q9ULL8 1493 aa42.49■■■■■ 4.39
RPP38-206ENST00000451677 SCRIBQ14160 1630 aa42.42■■■■■ 4.38
RPP38-206ENST00000451677 EIF4G1Q04637 1599 aaKnown RBP41.85■■■■■ 4.29
RPP38-206ENST00000451677 CC2D2AQ9P2K1 1620 aa41.84■■■■■ 4.29
RPP38-206ENST00000451677 CECR2Q9BXF3 1484 aa41.69■■■■■ 4.26
RPP38-206ENST00000451677 NCAPD3P42695 1498 aa40.7■■■■■ 4.11
RPP38-206ENST00000451677 ATAD2BQ9ULI0 1458 aa40.58■■■■■ 4.09
RPP38-206ENST00000451677 SMARCA4P51532 1647 aa40.57■■■■■ 4.09
RPP38-206ENST00000451677 SMARCA2P51531 1590 aa40.48■■■■■ 4.07
RPP38-206ENST00000451677 BAZ1AQ9NRL2 1556 aaPredicted RBP40.44■■■■■ 4.06
RPP38-206ENST00000451677 HMGXB3Q12766 1538 aa40.4■■■■■ 4.06
RPP38-206ENST00000451677 PEG3Q9GZU2 1588 aa40.26■■■■■ 4.04
RPP38-206ENST00000451677 BAZ1BQ9UIG0 1483 aaKnown RBP40.16■■■■■ 4.02
RPP38-206ENST00000451677 MROH2BQ7Z745 1585 aa40.14■■■■■ 4.02
RPP38-206ENST00000451677 ERCC6Q03468 1493 aa39.93■■■■□ 3.98
RPP38-206ENST00000451677 NESP48681 1621 aa39.84■■■■□ 3.97
RPP38-206ENST00000451677 CUX2O14529 1486 aa39.83■■■■□ 3.97
RPP38-206ENST00000451677 LAMC3Q9Y6N6 1575 aa39.67■■■■□ 3.94
RPP38-206ENST00000451677 WIZO95785 1651 aa39.63■■■■□ 3.93
RPP38-206ENST00000451677 RSF1Q96T23 1441 aaPredicted RBP39.47■■■■□ 3.91
RPP38-206ENST00000451677 DNAJC5Q9H3Z4 198 aa39.46■■■■□ 3.91
RPP38-206ENST00000451677 CADPSQ9ULU8 1353 aa39.45■■■■□ 3.91
RPP38-206ENST00000451677 PDS5BQ9NTI5 1447 aa39.44■■■■□ 3.9
RPP38-206ENST00000451677 THOC2Q8NI27 1593 aaKnown RBP39.41■■■■□ 3.9
RPP38-206ENST00000451677 KIF21AQ7Z4S6 1674 aa39.32■■■■□ 3.88
RPP38-206ENST00000451677 TOP2AP11388 1531 aaKnown RBP39.21■■■■□ 3.87
RPP38-206ENST00000451677 CFTRP13569 1480 aa39.07■■■■□ 3.85
RPP38-206ENST00000451677 MRC2Q9UBG0 1479 aa39.07■■■■□ 3.85
RPP38-206ENST00000451677 WDR62O43379 1518 aa38.98■■■■□ 3.83
RPP38-206ENST00000451677 CEP164Q9UPV0 1460 aa38.96■■■■□ 3.83
RPP38-206ENST00000451677 FANCD2Q9BXW9 1451 aa38.95■■■■□ 3.83
RPP38-206ENST00000451677 CCDC88BA6NC98 1476 aa38.76■■■■□ 3.8
RPP38-206ENST00000451677 PRDM2Q13029 1718 aa38.61■■■■□ 3.77
RPP38-206ENST00000451677 URB2Q14146 1524 aaKnown RBP38.61■■■■□ 3.77
RPP38-206ENST00000451677 TOPBP1Q92547 1522 aa38.26■■■■□ 3.72
RPP38-206ENST00000451677 ABCC8Q09428 1581 aa38.24■■■■□ 3.71
RPP38-206ENST00000451677 IFT140Q96RY7 1462 aa38.2■■■■□ 3.71
RPP38-206ENST00000451677 DNMBPQ6XZF7 1577 aa38.14■■■■□ 3.7
RPP38-206ENST00000451677 SUPT5HO00267 1087 aaKnown RBP38.1■■■■□ 3.69
RPP38-206ENST00000451677 ZNF608Q9ULD9 1512 aaPredicted RBP38.07■■■■□ 3.68
RPP38-206ENST00000451677 OSCARQ8IYS5 282 aa38.05■■■■□ 3.68
RPP38-206ENST00000451677 TARBP1Q13395 1621 aaKnown RBP37.9■■■■□ 3.66
RPP38-206ENST00000451677 POLA1P09884 1462 aaPredicted RBP37.89■■■■□ 3.66
RPP38-206ENST00000451677 EIF4G3O43432 1585 aaKnown RBP37.85■■■■□ 3.65
RPP38-206ENST00000451677 AQRO60306 1485 aaKnown RBP eCLIP37.76■■■■□ 3.63
RPP38-206ENST00000451677 TRIM41Q8WV44 630 aa37.72■■■■□ 3.63
RPP38-206ENST00000451677 SOGA1O94964 1423 aa37.71■■■■□ 3.63
RPP38-206ENST00000451677 RAD54L2Q9Y4B4 1467 aa37.71■■■■□ 3.63
RPP38-206ENST00000451677 CUX1P39880 1505 aa37.7■■■■□ 3.63
RPP38-206ENST00000451677 FGD5Q6ZNL6 1462 aa37.67■■■■□ 3.62
RPP38-206ENST00000451677 WDR97A6NE52 1622 aa37.58■■■■□ 3.61
RPP38-206ENST00000451677 TDRD9Q8NDG6 1382 aaKnown RBP37.57■■■■□ 3.61
RPP38-206ENST00000451677 CHD1O14646 1710 aa37.48■■■■□ 3.59
RPP38-206ENST00000451677 RIMBP3CA6NJZ7 1639 aa37.46■■■■□ 3.59
RPP38-206ENST00000451677 RIMBP3BA6NNM3 1639 aa37.46■■■■□ 3.59
RPP38-206ENST00000451677 RIMBP3Q9UFD9 1639 aa37.46■■■■□ 3.59
RPP38-206ENST00000451677 ARHGEF11O15085 1522 aa37.41■■■■□ 3.58
RPP38-206ENST00000451677 FBLN2P98095 1184 aa37.38■■■■□ 3.57
RPP38-206ENST00000451677 SNAPC4Q5SXM2 1469 aa37.38■■■■□ 3.57
RPP38-206ENST00000451677 GRIN2BQ13224 1484 aa37.37■■■■□ 3.57
RPP38-206ENST00000451677 MAGI1Q96QZ7 1491 aaPredicted RBP37.35■■■■□ 3.57
RPP38-206ENST00000451677 ABCA10Q8WWZ4 1543 aa37.31■■■■□ 3.56
RPP38-206ENST00000451677 GAPVD1Q14C86 1478 aa37.26■■■■□ 3.56
RPP38-206ENST00000451677 CHMP7Q8WUX9 453 aaPredicted RBP37.22■■■■□ 3.55
RPP38-206ENST00000451677 SYNJ2O15056 1496 aa37.21■■■■□ 3.55
RPP38-206ENST00000451677 WRNQ14191 1432 aaPredicted RBP eCLIP37.21■■■■□ 3.55
RPP38-206ENST00000451677 ABCA5Q8WWZ7 1642 aa37.2■■■■□ 3.55
RPP38-206ENST00000451677 TOP2BQ02880 1626 aa37.19■■■■□ 3.54
RPP38-206ENST00000451677 BIVM-ERCC5R4GMW8 1640 aa37.18■■■■□ 3.54
RPP38-206ENST00000451677 PBRM1Q86U86 1689 aa37.16■■■■□ 3.54
RPP38-206ENST00000451677 CLASP1Q7Z460 1538 aa37.15■■■■□ 3.54
RPP38-206ENST00000451677 SYNJ1O43426 1573 aa37.12■■■■□ 3.53
RPP38-206ENST00000451677 CYB5RLQ6IPT4 315 aa37.08■■■■□ 3.53
RPP38-206ENST00000451677 ARAP1Q96P48 1450 aa37.07■■■■□ 3.52
RPP38-206ENST00000451677 GRIN2AQ12879 1464 aa36.88■■■■□ 3.5
RPP38-206ENST00000451677 ADAMTS12P58397 1594 aa36.88■■■■□ 3.49
RPP38-206ENST00000451677 ERICH3Q5RHP9 1530 aa36.85■■■■□ 3.49
RPP38-206ENST00000451677 FHAD1B1AJZ9 1412 aa36.83■■■■□ 3.49
RPP38-206ENST00000451677 NUP160Q12769 1436 aa36.79■■■■□ 3.48
RPP38-206ENST00000451677 CEP170Q5SW79 1584 aa36.7■■■■□ 3.47
RPP38-206ENST00000451677 SHROOM2Q13796 1616 aa36.56■■■■□ 3.44
RPP38-206ENST00000451677 ERCC6L2Q5T890 1561 aa36.53■■■■□ 3.44
RPP38-206ENST00000451677 TRHP20396 242 aaPredicted RBP36.52■■■■□ 3.44
RPP38-206ENST00000451677 KIF27Q86VH2 1401 aa36.49■■■■□ 3.43
RPP38-206ENST00000451677 IGF1RP08069 1367 aa36.46■■■■□ 3.43
RPP38-206ENST00000451677 JPH4Q96JJ6 628 aa36.37■■■■□ 3.41
RPP38-206ENST00000451677 PRG4Q92954 1404 aaPredicted RBP36.35■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms