RNA–Protein interactions for RNA: ENST00000451664.1

ACTR1B-202, Transcript of ARP1 actin related protein 1 homolog B, humanhuman

TSL 5

Gene ACTR1B, Length 1,151 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1B-202ENST00000451664 NISCHQ9Y2I1 1504 aa33.01■■■□□ 2.87
ACTR1B-202ENST00000451664 CCDC180Q9P1Z9 1646 aa29.52■■■□□ 2.32
ACTR1B-202ENST00000451664 ABCC9O60706 1549 aa29.09■■■□□ 2.25
ACTR1B-202ENST00000451664 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
ACTR1B-202ENST00000451664 NACADO15069 1562 aa27.78■■■□□ 2.04
ACTR1B-202ENST00000451664 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.02
ACTR1B-202ENST00000451664 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
ACTR1B-202ENST00000451664 ZCCHC6Q5VYS8 1495 aaKnown RBP27.42■■□□□ 1.98
ACTR1B-202ENST00000451664 UNC13AQ9UPW8 1703 aa27.36■■□□□ 1.97
ACTR1B-202ENST00000451664 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
ACTR1B-202ENST00000451664 PABPN1Q86U42 306 aaKnown RBP eCLIP27.12■■□□□ 1.93
ACTR1B-202ENST00000451664 BICRAQ9NZM4 1560 aa27.05■■□□□ 1.92
ACTR1B-202ENST00000451664 DNAJC5BQ9UF47 199 aa26.93■■□□□ 1.9
ACTR1B-202ENST00000451664 SCRIBQ14160 1630 aa26.87■■□□□ 1.89
ACTR1B-202ENST00000451664 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
ACTR1B-202ENST00000451664 EIF4G1Q04637 1599 aaKnown RBP26.35■■□□□ 1.81
ACTR1B-202ENST00000451664 CC2D2AQ9P2K1 1620 aa26.33■■□□□ 1.81
ACTR1B-202ENST00000451664 CECR2Q9BXF3 1484 aa26.16■■□□□ 1.78
ACTR1B-202ENST00000451664 SMARCA4P51532 1647 aa25.69■■□□□ 1.7
ACTR1B-202ENST00000451664 NCAPD3P42695 1498 aa25.61■■□□□ 1.69
ACTR1B-202ENST00000451664 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
ACTR1B-202ENST00000451664 ATAD2BQ9ULI0 1458 aa25.58■■□□□ 1.69
ACTR1B-202ENST00000451664 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
ACTR1B-202ENST00000451664 HMGXB3Q12766 1538 aa25.47■■□□□ 1.67
ACTR1B-202ENST00000451664 MROH2BQ7Z745 1585 aa25.43■■□□□ 1.66
ACTR1B-202ENST00000451664 PEG3Q9GZU2 1588 aa25.43■■□□□ 1.66
ACTR1B-202ENST00000451664 BAZ1BQ9UIG0 1483 aaKnown RBP25.37■■□□□ 1.65
ACTR1B-202ENST00000451664 WIZO95785 1651 aa25.19■■□□□ 1.62
ACTR1B-202ENST00000451664 NESP48681 1621 aa25.09■■□□□ 1.61
ACTR1B-202ENST00000451664 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
ACTR1B-202ENST00000451664 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
ACTR1B-202ENST00000451664 LAMC3Q9Y6N6 1575 aa25.01■■□□□ 1.59
ACTR1B-202ENST00000451664 CUX2O14529 1486 aa24.92■■□□□ 1.58
ACTR1B-202ENST00000451664 KIF21AQ7Z4S6 1674 aa24.87■■□□□ 1.57
ACTR1B-202ENST00000451664 TOP2AP11388 1531 aaKnown RBP24.86■■□□□ 1.57
ACTR1B-202ENST00000451664 CADPSQ9ULU8 1353 aa24.84■■□□□ 1.57
ACTR1B-202ENST00000451664 PDS5BQ9NTI5 1447 aa24.83■■□□□ 1.57
ACTR1B-202ENST00000451664 THOC2Q8NI27 1593 aaKnown RBP24.8■■□□□ 1.56
ACTR1B-202ENST00000451664 CFTRP13569 1480 aa24.64■■□□□ 1.54
ACTR1B-202ENST00000451664 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.53
ACTR1B-202ENST00000451664 PRDM2Q13029 1718 aa24.58■■□□□ 1.52
ACTR1B-202ENST00000451664 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
ACTR1B-202ENST00000451664 FANCD2Q9BXW9 1451 aa24.57■■□□□ 1.52
ACTR1B-202ENST00000451664 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
ACTR1B-202ENST00000451664 WDR62O43379 1518 aa24.52■■□□□ 1.52
ACTR1B-202ENST00000451664 DNAJC5Q9H3Z4 198 aa24.48■■□□□ 1.51
ACTR1B-202ENST00000451664 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
ACTR1B-202ENST00000451664 SUPT5HO00267 1087 aaKnown RBP24.2■■□□□ 1.46
ACTR1B-202ENST00000451664 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
ACTR1B-202ENST00000451664 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
ACTR1B-202ENST00000451664 DNMBPQ6XZF7 1577 aa24.12■■□□□ 1.45
ACTR1B-202ENST00000451664 IFT140Q96RY7 1462 aa24.07■■□□□ 1.44
ACTR1B-202ENST00000451664 ZNF608Q9ULD9 1512 aaPredicted RBP23.97■■□□□ 1.43
ACTR1B-202ENST00000451664 TARBP1Q13395 1621 aaKnown RBP23.94■■□□□ 1.42
ACTR1B-202ENST00000451664 POLA1P09884 1462 aaPredicted RBP23.92■■□□□ 1.42
ACTR1B-202ENST00000451664 EIF4G3O43432 1585 aaKnown RBP23.9■■□□□ 1.42
ACTR1B-202ENST00000451664 CUX1P39880 1505 aa23.88■■□□□ 1.41
ACTR1B-202ENST00000451664 OSCARQ8IYS5 282 aa23.85■■□□□ 1.41
ACTR1B-202ENST00000451664 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
ACTR1B-202ENST00000451664 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.41
ACTR1B-202ENST00000451664 SOGA1O94964 1423 aa23.83■■□□□ 1.4
ACTR1B-202ENST00000451664 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.42e-8■■■■□ 19.3
ACTR1B-202ENST00000451664 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
ACTR1B-202ENST00000451664 TDRD9Q8NDG6 1382 aaKnown RBP23.72■■□□□ 1.39
ACTR1B-202ENST00000451664 CHD1O14646 1710 aa23.71■■□□□ 1.39
ACTR1B-202ENST00000451664 BIVM-ERCC5R4GMW8 1640 aa23.64■■□□□ 1.38
ACTR1B-202ENST00000451664 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
ACTR1B-202ENST00000451664 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.37
ACTR1B-202ENST00000451664 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
ACTR1B-202ENST00000451664 FBLN2P98095 1184 aa23.59■■□□□ 1.37
ACTR1B-202ENST00000451664 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
ACTR1B-202ENST00000451664 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
ACTR1B-202ENST00000451664 GRIN2BQ13224 1484 aa23.58■■□□□ 1.37
ACTR1B-202ENST00000451664 SNAPC4Q5SXM2 1469 aa23.58■■□□□ 1.37
ACTR1B-202ENST00000451664 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
ACTR1B-202ENST00000451664 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
ACTR1B-202ENST00000451664 MAGI1Q96QZ7 1491 aaPredicted RBP23.55■■□□□ 1.36
ACTR1B-202ENST00000451664 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
ACTR1B-202ENST00000451664 RIMBP3CA6NJZ7 1639 aa23.53■■□□□ 1.36
ACTR1B-202ENST00000451664 RIMBP3BA6NNM3 1639 aa23.53■■□□□ 1.36
ACTR1B-202ENST00000451664 RIMBP3Q9UFD9 1639 aa23.53■■□□□ 1.36
ACTR1B-202ENST00000451664 CHMP7Q8WUX9 453 aaPredicted RBP23.48■■□□□ 1.35
ACTR1B-202ENST00000451664 ARHGEF11O15085 1522 aa23.46■■□□□ 1.35
ACTR1B-202ENST00000451664 SYNJ2O15056 1496 aa23.45■■□□□ 1.34
ACTR1B-202ENST00000451664 CLASP1Q7Z460 1538 aa23.37■■□□□ 1.33
ACTR1B-202ENST00000451664 ADAMTS12P58397 1594 aa23.32■■□□□ 1.32
ACTR1B-202ENST00000451664 ERICH3Q5RHP9 1530 aa23.31■■□□□ 1.32
ACTR1B-202ENST00000451664 GRIN2AQ12879 1464 aa23.27■■□□□ 1.32
ACTR1B-202ENST00000451664 CYB5RLQ6IPT4 315 aa23.26■■□□□ 1.31
ACTR1B-202ENST00000451664 FHAD1B1AJZ9 1412 aa23.25■■□□□ 1.31
ACTR1B-202ENST00000451664 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
ACTR1B-202ENST00000451664 CEP170Q5SW79 1584 aa23.18■■□□□ 1.3
ACTR1B-202ENST00000451664 NUP160Q12769 1436 aa23.16■■□□□ 1.3
ACTR1B-202ENST00000451664 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
ACTR1B-202ENST00000451664 CUL7Q14999 1698 aa23.08■■□□□ 1.29
ACTR1B-202ENST00000451664 SHROOM2Q13796 1616 aa23.08■■□□□ 1.28
ACTR1B-202ENST00000451664 IGF1RP08069 1367 aa23.07■■□□□ 1.28
ACTR1B-202ENST00000451664 ERCC6L2Q5T890 1561 aa23.03■■□□□ 1.28
ACTR1B-202ENST00000451664 RUSC2Q8N2Y8 1516 aa22.98■■□□□ 1.27
ACTR1B-202ENST00000451664 JPH4Q96JJ6 628 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms