RNA–Protein interactions for RNA: ENST00000451647.1

CNPPD1-203, Transcript of cyclin Pas1/PHO80 domain containing 1, humanhuman

TSL 3

Gene CNPPD1, Length 919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNPPD1-203ENST00000451647 NISCHQ9Y2I1 1504 aa49.95■■■■■ 5.59
CNPPD1-203ENST00000451647 CCDC180Q9P1Z9 1646 aa44.78■■■■■ 4.76
CNPPD1-203ENST00000451647 ABCC9O60706 1549 aa44.43■■■■■ 4.7
CNPPD1-203ENST00000451647 RB1CC1Q8TDY2 1594 aa42.49■■■■■ 4.39
CNPPD1-203ENST00000451647 NACADO15069 1562 aa42.27■■■■■ 4.36
CNPPD1-203ENST00000451647 DCAF8L2P0C7V8 631 aa42.01■■■■■ 4.32
CNPPD1-203ENST00000451647 MYO15BQ96JP2 1530 aa41.8■■■■■ 4.28
CNPPD1-203ENST00000451647 UNC13AQ9UPW8 1703 aa41.49■■■■■ 4.23
CNPPD1-203ENST00000451647 ZCCHC6Q5VYS8 1495 aaKnown RBP41.44■■■■■ 4.22
CNPPD1-203ENST00000451647 DNAJC5BQ9UF47 199 aa41.42■■■■■ 4.22
CNPPD1-203ENST00000451647 PABPN1Q86U42 306 aaKnown RBP eCLIP41.38■■■■■ 4.21
CNPPD1-203ENST00000451647 DCAF1Q9Y4B6 1507 aa41.33■■■■■ 4.21
CNPPD1-203ENST00000451647 BICRAQ9NZM4 1560 aa41.18■■■■■ 4.18
CNPPD1-203ENST00000451647 SHROOM4Q9ULL8 1493 aa40.77■■■■■ 4.12
CNPPD1-203ENST00000451647 SCRIBQ14160 1630 aa40.71■■■■■ 4.11
CNPPD1-203ENST00000451647 CC2D2AQ9P2K1 1620 aa40.19■■■■■ 4.02
CNPPD1-203ENST00000451647 EIF4G1Q04637 1599 aaKnown RBP40.17■■■■■ 4.02
CNPPD1-203ENST00000451647 CECR2Q9BXF3 1484 aa40.03■■■■■ 4
CNPPD1-203ENST00000451647 NCAPD3P42695 1498 aa38.99■■■■□ 3.83
CNPPD1-203ENST00000451647 SMARCA4P51532 1647 aa38.92■■■■□ 3.82
CNPPD1-203ENST00000451647 ATAD2BQ9ULI0 1458 aa38.87■■■■□ 3.81
CNPPD1-203ENST00000451647 SMARCA2P51531 1590 aa38.84■■■■□ 3.81
CNPPD1-203ENST00000451647 BAZ1AQ9NRL2 1556 aaPredicted RBP38.78■■■■□ 3.8
CNPPD1-203ENST00000451647 HMGXB3Q12766 1538 aa38.73■■■■□ 3.79
CNPPD1-203ENST00000451647 PEG3Q9GZU2 1588 aa38.57■■■■□ 3.76
CNPPD1-203ENST00000451647 BAZ1BQ9UIG0 1483 aaKnown RBP38.54■■■■□ 3.76
CNPPD1-203ENST00000451647 MROH2BQ7Z745 1585 aa38.44■■■■□ 3.74
CNPPD1-203ENST00000451647 ERCC6Q03468 1493 aa38.4■■■■□ 3.74
CNPPD1-203ENST00000451647 CUX2O14529 1486 aa38.28■■■■□ 3.72
CNPPD1-203ENST00000451647 NESP48681 1621 aa38.22■■■■□ 3.71
CNPPD1-203ENST00000451647 LAMC3Q9Y6N6 1575 aa38.1■■■■□ 3.69
CNPPD1-203ENST00000451647 WIZO95785 1651 aa38.01■■■■□ 3.67
CNPPD1-203ENST00000451647 DNAJC5Q9H3Z4 198 aa37.95■■■■□ 3.67
CNPPD1-203ENST00000451647 PDS5BQ9NTI5 1447 aa37.87■■■■□ 3.65
CNPPD1-203ENST00000451647 THOC2Q8NI27 1593 aaKnown RBP37.83■■■■□ 3.65
CNPPD1-203ENST00000451647 CADPSQ9ULU8 1353 aa37.81■■■■□ 3.64
CNPPD1-203ENST00000451647 KIF21AQ7Z4S6 1674 aa37.79■■■■□ 3.64
CNPPD1-203ENST00000451647 RSF1Q96T23 1441 aaPredicted RBP37.75■■■■□ 3.63
CNPPD1-203ENST00000451647 TOP2AP11388 1531 aaKnown RBP37.58■■■■□ 3.61
CNPPD1-203ENST00000451647 MRC2Q9UBG0 1479 aa37.49■■■■□ 3.59
CNPPD1-203ENST00000451647 CFTRP13569 1480 aa37.43■■■■□ 3.58
CNPPD1-203ENST00000451647 CEP164Q9UPV0 1460 aa37.4■■■■□ 3.58
CNPPD1-203ENST00000451647 WDR62O43379 1518 aa37.4■■■■□ 3.58
CNPPD1-203ENST00000451647 FANCD2Q9BXW9 1451 aa37.36■■■■□ 3.57
CNPPD1-203ENST00000451647 PRDM2Q13029 1718 aa37.13■■■■□ 3.53
CNPPD1-203ENST00000451647 CCDC88BA6NC98 1476 aa37.13■■■■□ 3.53
CNPPD1-203ENST00000451647 URB2Q14146 1524 aaKnown RBP37.01■■■■□ 3.52
CNPPD1-203ENST00000451647 ABCC8Q09428 1581 aa36.71■■■■□ 3.47
CNPPD1-203ENST00000451647 TOPBP1Q92547 1522 aa36.68■■■■□ 3.46
CNPPD1-203ENST00000451647 IFT140Q96RY7 1462 aa36.65■■■■□ 3.46
CNPPD1-203ENST00000451647 DNMBPQ6XZF7 1577 aa36.59■■■■□ 3.45
CNPPD1-203ENST00000451647 OSCARQ8IYS5 282 aa36.57■■■■□ 3.44
CNPPD1-203ENST00000451647 ZNF608Q9ULD9 1512 aaPredicted RBP36.49■■■■□ 3.43
CNPPD1-203ENST00000451647 EIF4G3O43432 1585 aaKnown RBP36.36■■■■□ 3.41
CNPPD1-203ENST00000451647 TARBP1Q13395 1621 aaKnown RBP36.34■■■■□ 3.41
CNPPD1-203ENST00000451647 TRIM41Q8WV44 630 aa36.33■■■■□ 3.41
CNPPD1-203ENST00000451647 POLA1P09884 1462 aaPredicted RBP36.31■■■■□ 3.4
CNPPD1-203ENST00000451647 SUPT5HO00267 1087 aaKnown RBP36.23■■■■□ 3.39
CNPPD1-203ENST00000451647 AQRO60306 1485 aaKnown RBP eCLIP36.22■■■■□ 3.391e-6■■■■□ 21.9
CNPPD1-203ENST00000451647 SOGA1O94964 1423 aa36.17■■■■□ 3.38
CNPPD1-203ENST00000451647 RAD54L2Q9Y4B4 1467 aa36.14■■■■□ 3.38
CNPPD1-203ENST00000451647 FGD5Q6ZNL6 1462 aa36.12■■■■□ 3.37
CNPPD1-203ENST00000451647 CUX1P39880 1505 aa36.11■■■■□ 3.37
CNPPD1-203ENST00000451647 WDR97A6NE52 1622 aa36.08■■■■□ 3.37
CNPPD1-203ENST00000451647 CHD1O14646 1710 aa36.04■■■■□ 3.36
CNPPD1-203ENST00000451647 TDRD9Q8NDG6 1382 aaKnown RBP36.03■■■■□ 3.36
CNPPD1-203ENST00000451647 RIMBP3CA6NJZ7 1639 aa36.02■■■■□ 3.36
CNPPD1-203ENST00000451647 RIMBP3BA6NNM3 1639 aa36.02■■■■□ 3.36
CNPPD1-203ENST00000451647 RIMBP3Q9UFD9 1639 aa36.02■■■■□ 3.36
CNPPD1-203ENST00000451647 FBLN2P98095 1184 aa35.94■■■■□ 3.34
CNPPD1-203ENST00000451647 ARHGEF11O15085 1522 aa35.93■■■■□ 3.34
CNPPD1-203ENST00000451647 SNAPC4Q5SXM2 1469 aa35.86■■■■□ 3.33
CNPPD1-203ENST00000451647 GRIN2BQ13224 1484 aa35.85■■■■□ 3.33
CNPPD1-203ENST00000451647 MAGI1Q96QZ7 1491 aaPredicted RBP35.85■■■■□ 3.33
CNPPD1-203ENST00000451647 CHMP7Q8WUX9 453 aaPredicted RBP35.76■■■■□ 3.32
CNPPD1-203ENST00000451647 ABCA10Q8WWZ4 1543 aa35.75■■■■□ 3.31
CNPPD1-203ENST00000451647 GAPVD1Q14C86 1478 aa35.74■■■■□ 3.31
CNPPD1-203ENST00000451647 PBRM1Q86U86 1689 aa35.72■■■■□ 3.31
CNPPD1-203ENST00000451647 SYNJ2O15056 1496 aa35.7■■■■□ 3.31
CNPPD1-203ENST00000451647 SYNJ1O43426 1573 aa35.68■■■■□ 3.3
CNPPD1-203ENST00000451647 WRNQ14191 1432 aaPredicted RBP eCLIP35.67■■■■□ 3.3
CNPPD1-203ENST00000451647 ABCA5Q8WWZ7 1642 aa35.67■■■■□ 3.3
CNPPD1-203ENST00000451647 TOP2BQ02880 1626 aa35.65■■■■□ 3.3
CNPPD1-203ENST00000451647 BIVM-ERCC5R4GMW8 1640 aa35.65■■■■□ 3.3
CNPPD1-203ENST00000451647 CYB5RLQ6IPT4 315 aa35.64■■■■□ 3.3
CNPPD1-203ENST00000451647 CLASP1Q7Z460 1538 aa35.63■■■■□ 3.29
CNPPD1-203ENST00000451647 ARAP1Q96P48 1450 aa35.58■■■■□ 3.29
CNPPD1-203ENST00000451647 ADAMTS12P58397 1594 aa35.38■■■■□ 3.25
CNPPD1-203ENST00000451647 GRIN2AQ12879 1464 aa35.37■■■■□ 3.25
CNPPD1-203ENST00000451647 ERICH3Q5RHP9 1530 aa35.34■■■■□ 3.25
CNPPD1-203ENST00000451647 FHAD1B1AJZ9 1412 aa35.32■■■■□ 3.24
CNPPD1-203ENST00000451647 NUP160Q12769 1436 aa35.24■■■■□ 3.23
CNPPD1-203ENST00000451647 CEP170Q5SW79 1584 aa35.21■■■■□ 3.23
CNPPD1-203ENST00000451647 TRHP20396 242 aaPredicted RBP35.18■■■■□ 3.22
CNPPD1-203ENST00000451647 SHROOM2Q13796 1616 aa35.08■■■■□ 3.21
CNPPD1-203ENST00000451647 ERCC6L2Q5T890 1561 aa35.04■■■■□ 3.2
CNPPD1-203ENST00000451647 KIF27Q86VH2 1401 aa34.97■■■■□ 3.19
CNPPD1-203ENST00000451647 IGF1RP08069 1367 aa34.89■■■■□ 3.18
CNPPD1-203ENST00000451647 JPH4Q96JJ6 628 aa34.89■■■■□ 3.18
CNPPD1-203ENST00000451647 CUL7Q14999 1698 aa34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms